EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAMG00000024135 (Gene tree)
Gene ID: 113145042
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Mastacembelus_armatus
Status: putative
Strand: Plus strand
Length: 13811 bases
Position: chrOOHQ01000094.1:5894440-5908250
Accession: 113145042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAMP00000035949	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAMT00000036869	-	1202	-	ENSMAMP00000035949	249 (aa)	XP_026187151	UPI000E463827

Gene Model

Click here to download ENSMAMG00000024135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAMG00000024135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAMG00000024135	rbm38	54	75.556	ENSMAMG00000013172	rbm24a	100	55.510
ENSMAMG00000024135	rbm38	81	30.526	ENSMAMG00000002279	MSI1	86	30.526
ENSMAMG00000024135	rbm38	62	68.125	ENSMAMG00000012841	rbm24b	100	54.980
ENSMAMG00000024135	rbm38	98	65.339	ENSMAMG00000020499	RBM38	100	67.717

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAMG00000024135	rbm38	91	59.227	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSMAMG00000024135	rbm38	98	64.683	ENSAPOG00000009939	-	100	67.059	Acanthochromis_polyacanthus
ENSMAMG00000024135	rbm38	100	94.400	ENSAPOG00000003301	rbm38	100	94.400	Acanthochromis_polyacanthus
ENSMAMG00000024135	rbm38	100	91.200	ENSACIG00000000010	rbm38	100	91.200	Amphilophus_citrinellus
ENSMAMG00000024135	rbm38	98	65.737	ENSACIG00000012502	-	100	83.761	Amphilophus_citrinellus
ENSMAMG00000024135	rbm38	94	64.583	ENSAOCG00000012559	RBM38	98	67.901	Amphiprion_ocellaris
ENSMAMG00000024135	rbm38	100	94.800	ENSAOCG00000013497	-	100	94.800	Amphiprion_ocellaris
ENSMAMG00000024135	rbm38	100	94.800	ENSAPEG00000013137	rbm38	100	94.800	Amphiprion_percula
ENSMAMG00000024135	rbm38	98	64.683	ENSAPEG00000023581	-	100	66.667	Amphiprion_percula
ENSMAMG00000024135	rbm38	98	64.286	ENSATEG00000016710	-	100	66.667	Anabas_testudineus
ENSMAMG00000024135	rbm38	100	90.800	ENSATEG00000016366	rbm38	100	90.800	Anabas_testudineus
ENSMAMG00000024135	rbm38	93	57.563	ENSACAG00000016238	RBM38	90	57.563	Anolis_carolinensis
ENSMAMG00000024135	rbm38	93	59.244	ENSANAG00000031959	RBM38	81	84.848	Aotus_nancymaae
ENSMAMG00000024135	rbm38	98	64.940	ENSACLG00000019514	-	100	66.135	Astatotilapia_calliptera
ENSMAMG00000024135	rbm38	95	56.303	ENSAMXG00000038120	rbm38	96	56.303	Astyanax_mexicanus
ENSMAMG00000024135	rbm38	98	61.200	ENSAMXG00000015601	-	100	62.000	Astyanax_mexicanus
ENSMAMG00000024135	rbm38	91	59.657	ENSBTAG00000008105	RBM38	89	59.657	Bos_taurus
ENSMAMG00000024135	rbm38	58	59.310	WBGene00006321	sup-12	77	63.780	Caenorhabditis_elegans
ENSMAMG00000024135	rbm38	91	58.798	ENSCJAG00000019139	RBM38	81	84.848	Callithrix_jacchus
ENSMAMG00000024135	rbm38	91	59.227	ENSCAFG00020021943	RBM38	89	59.227	Canis_lupus_dingo
ENSMAMG00000024135	rbm38	91	59.227	ENSCHIG00000002609	RBM38	89	59.227	Capra_hircus
ENSMAMG00000024135	rbm38	91	59.227	ENSCPOG00000012781	RBM38	89	59.227	Cavia_porcellus
ENSMAMG00000024135	rbm38	91	58.798	ENSCCAG00000036872	RBM38	81	84.848	Cebus_capucinus
ENSMAMG00000024135	rbm38	91	59.657	ENSCATG00000032133	RBM38	81	84.848	Cercocebus_atys
ENSMAMG00000024135	rbm38	93	58.403	ENSCLAG00000005906	RBM38	94	58.403	Chinchilla_lanigera
ENSMAMG00000024135	rbm38	91	59.657	ENSCSAG00000015503	RBM38	89	59.657	Chlorocebus_sabaeus
ENSMAMG00000024135	rbm38	93	57.322	ENSCPBG00000024059	RBM38	100	57.322	Chrysemys_picta_bellii
ENSMAMG00000024135	rbm38	61	61.935	ENSCSAVG00000001132	-	58	61.935	Ciona_savignyi
ENSMAMG00000024135	rbm38	94	45.339	ENSCANG00000030105	-	80	45.339	Colobus_angolensis_palliatus
ENSMAMG00000024135	rbm38	72	65.574	ENSCGRG00001012928	Rbm38	89	58.369	Cricetulus_griseus_chok1gshd
ENSMAMG00000024135	rbm38	84	69.378	ENSCSEG00000020943	rbm38	68	69.378	Cynoglossus_semilaevis
ENSMAMG00000024135	rbm38	98	63.095	ENSCSEG00000004701	-	100	64.683	Cynoglossus_semilaevis
ENSMAMG00000024135	rbm38	98	64.427	ENSCVAG00000005472	-	100	64.591	Cyprinodon_variegatus
ENSMAMG00000024135	rbm38	100	85.200	ENSCVAG00000015952	rbm38	100	85.200	Cyprinodon_variegatus
ENSMAMG00000024135	rbm38	98	63.158	ENSDARG00000058818	rbm38	100	63.158	Danio_rerio
ENSMAMG00000024135	rbm38	93	58.475	ENSDNOG00000032004	RBM38	100	58.475	Dasypus_novemcinctus
ENSMAMG00000024135	rbm38	91	59.227	ENSECAG00000007700	RBM38	89	59.227	Equus_caballus
ENSMAMG00000024135	rbm38	91	57.692	ENSEEUG00000013489	RBM38	89	58.547	Erinaceus_europaeus
ENSMAMG00000024135	rbm38	92	72.489	ENSELUG00000000585	-	100	72.489	Esox_lucius
ENSMAMG00000024135	rbm38	98	65.098	ENSELUG00000005849	-	100	65.882	Esox_lucius
ENSMAMG00000024135	rbm38	91	59.227	ENSFCAG00000042916	RBM38	81	83.838	Felis_catus
ENSMAMG00000024135	rbm38	69	68.182	ENSFALG00000010805	RBM38	90	68.182	Ficedula_albicollis
ENSMAMG00000024135	rbm38	98	62.550	ENSFHEG00000006160	-	100	63.672	Fundulus_heteroclitus
ENSMAMG00000024135	rbm38	100	86.853	ENSFHEG00000017748	rbm38	100	86.853	Fundulus_heteroclitus
ENSMAMG00000024135	rbm38	75	71.728	ENSGMOG00000016655	-	100	73.822	Gadus_morhua
ENSMAMG00000024135	rbm38	93	58.403	ENSGALG00000026081	RBM38	100	58.824	Gallus_gallus
ENSMAMG00000024135	rbm38	93	81.116	ENSGACG00000015224	rbm38	100	81.116	Gasterosteus_aculeatus
ENSMAMG00000024135	rbm38	93	62.447	ENSGACG00000009873	-	100	63.713	Gasterosteus_aculeatus
ENSMAMG00000024135	rbm38	93	56.904	ENSGAGG00000001187	RBM38	100	56.904	Gopherus_agassizii
ENSMAMG00000024135	rbm38	98	64.940	ENSHBUG00000011778	-	100	66.135	Haplochromis_burtoni
ENSMAMG00000024135	rbm38	100	91.200	ENSHBUG00000012058	rbm38	100	91.200	Haplochromis_burtoni
ENSMAMG00000024135	rbm38	91	59.227	ENSHGLG00000015077	RBM38	89	59.227	Heterocephalus_glaber_female
ENSMAMG00000024135	rbm38	100	64.400	ENSHCOG00000019040	rbm38	100	64.400	Hippocampus_comes
ENSMAMG00000024135	rbm38	83	70.142	ENSHCOG00000005622	-	59	70.952	Hippocampus_comes
ENSMAMG00000024135	rbm38	98	60.643	ENSIPUG00000019349	-	100	60.643	Ictalurus_punctatus
ENSMAMG00000024135	rbm38	91	74.043	ENSKMAG00000012402	rbm38	99	74.043	Kryptolebias_marmoratus
ENSMAMG00000024135	rbm38	100	91.200	ENSLBEG00000018878	rbm38	100	91.200	Labrus_bergylta
ENSMAMG00000024135	rbm38	98	64.143	ENSLBEG00000016163	RBM38	100	65.759	Labrus_bergylta
ENSMAMG00000024135	rbm38	98	64.919	ENSLOCG00000003456	rbm38	100	64.919	Lepisosteus_oculatus
ENSMAMG00000024135	rbm38	91	59.657	ENSMFAG00000043808	RBM38	81	84.848	Macaca_fascicularis
ENSMAMG00000024135	rbm38	91	59.657	ENSMMUG00000031391	RBM38	81	84.848	Macaca_mulatta
ENSMAMG00000024135	rbm38	91	59.657	ENSMNEG00000034683	RBM38	81	84.848	Macaca_nemestrina
ENSMAMG00000024135	rbm38	98	64.940	ENSMZEG00005000849	-	100	66.135	Maylandia_zebra
ENSMAMG00000024135	rbm38	100	91.200	ENSMZEG00005026036	rbm38	100	91.200	Maylandia_zebra
ENSMAMG00000024135	rbm38	72	66.120	ENSMAUG00000021211	Rbm38	89	59.227	Mesocricetus_auratus
ENSMAMG00000024135	rbm38	93	57.563	ENSMICG00000038011	RBM38	100	57.563	Microcebus_murinus
ENSMAMG00000024135	rbm38	72	66.120	ENSMOCG00000008715	Rbm38	89	59.227	Microtus_ochrogaster
ENSMAMG00000024135	rbm38	98	63.889	ENSMMOG00000020051	-	100	65.882	Mola_mola
ENSMAMG00000024135	rbm38	95	57.025	ENSMODG00000016458	RBM38	94	57.025	Monodelphis_domestica
ENSMAMG00000024135	rbm38	100	76.707	ENSMALG00000022327	rbm38	100	77.200	Monopterus_albus
ENSMAMG00000024135	rbm38	75	75.263	ENSMALG00000004680	RBM38	89	65.272	Monopterus_albus
ENSMAMG00000024135	rbm38	91	58.798	MGP_CAROLIEiJ_G0024745	Rbm38	89	58.798	Mus_caroli
ENSMAMG00000024135	rbm38	91	58.798	ENSMUSG00000027510	Rbm38	89	58.798	Mus_musculus
ENSMAMG00000024135	rbm38	91	57.511	MGP_PahariEiJ_G0026186	Rbm38	89	57.511	Mus_pahari
ENSMAMG00000024135	rbm38	91	58.798	MGP_SPRETEiJ_G0025665	Rbm38	89	58.798	Mus_spretus
ENSMAMG00000024135	rbm38	74	65.426	ENSMPUG00000006518	RBM38	91	65.426	Mustela_putorius_furo
ENSMAMG00000024135	rbm38	91	58.369	ENSMLUG00000011140	RBM38	98	58.369	Myotis_lucifugus
ENSMAMG00000024135	rbm38	100	90.800	ENSNBRG00000022685	rbm38	100	90.800	Neolamprologus_brichardi
ENSMAMG00000024135	rbm38	98	64.940	ENSNBRG00000022545	-	100	66.135	Neolamprologus_brichardi
ENSMAMG00000024135	rbm38	91	59.657	ENSODEG00000007980	RBM38	89	59.657	Octodon_degus
ENSMAMG00000024135	rbm38	98	64.800	ENSONIG00000020324	-	100	66.000	Oreochromis_niloticus
ENSMAMG00000024135	rbm38	98	91.429	ENSONIG00000017073	rbm38	100	91.429	Oreochromis_niloticus
ENSMAMG00000024135	rbm38	78	61.929	ENSOANG00000009259	RBM38	74	62.245	Ornithorhynchus_anatinus
ENSMAMG00000024135	rbm38	98	62.205	ENSORLG00000027180	-	100	63.813	Oryzias_latipes
ENSMAMG00000024135	rbm38	100	82.869	ENSORLG00000012154	rbm38	100	82.869	Oryzias_latipes
ENSMAMG00000024135	rbm38	100	61.628	ENSORLG00020020751	-	100	63.813	Oryzias_latipes_hni
ENSMAMG00000024135	rbm38	100	82.869	ENSORLG00020017871	rbm38	100	82.869	Oryzias_latipes_hni
ENSMAMG00000024135	rbm38	100	82.869	ENSORLG00015012606	rbm38	100	82.869	Oryzias_latipes_hsok
ENSMAMG00000024135	rbm38	98	63.241	ENSORLG00015017040	-	100	64.427	Oryzias_latipes_hsok
ENSMAMG00000024135	rbm38	100	82.072	ENSOMEG00000006805	rbm38	100	82.072	Oryzias_melastigma
ENSMAMG00000024135	rbm38	98	62.302	ENSOMEG00000023912	-	100	64.314	Oryzias_melastigma
ENSMAMG00000024135	rbm38	91	59.657	ENSOGAG00000029136	RBM38	88	59.657	Otolemur_garnettii
ENSMAMG00000024135	rbm38	91	59.227	ENSPPRG00000009507	RBM38	81	83.838	Panthera_pardus
ENSMAMG00000024135	rbm38	76	64.583	ENSPTRG00000013661	RBM38	81	84.848	Pan_troglodytes
ENSMAMG00000024135	rbm38	50	79.200	ENSPTRG00000045845	-	68	79.200	Pan_troglodytes
ENSMAMG00000024135	rbm38	95	46.311	ENSPANG00000033127	-	93	46.311	Papio_anubis
ENSMAMG00000024135	rbm38	91	59.657	ENSPANG00000020919	-	81	84.848	Papio_anubis
ENSMAMG00000024135	rbm38	98	60.400	ENSPKIG00000018122	-	100	80.342	Paramormyrops_kingsleyae
ENSMAMG00000024135	rbm38	98	61.905	ENSPKIG00000025417	rbm38	100	62.109	Paramormyrops_kingsleyae
ENSMAMG00000024135	rbm38	93	55.462	ENSPSIG00000011649	RBM38	92	55.462	Pelodiscus_sinensis
ENSMAMG00000024135	rbm38	100	77.291	ENSPMGG00000011343	rbm38	100	80.080	Periophthalmus_magnuspinnatus
ENSMAMG00000024135	rbm38	98	60.630	ENSPMGG00000017094	-	100	61.811	Periophthalmus_magnuspinnatus
ENSMAMG00000024135	rbm38	95	57.851	ENSPCIG00000013648	RBM38	94	57.851	Phascolarctos_cinereus
ENSMAMG00000024135	rbm38	100	85.433	ENSPFOG00000011658	rbm38	100	87.402	Poecilia_formosa
ENSMAMG00000024135	rbm38	100	87.008	ENSPLAG00000005218	rbm38	100	87.008	Poecilia_latipinna
ENSMAMG00000024135	rbm38	98	62.891	ENSPLAG00000002500	-	100	64.143	Poecilia_latipinna
ENSMAMG00000024135	rbm38	100	85.827	ENSPMEG00000015770	rbm38	100	87.795	Poecilia_mexicana
ENSMAMG00000024135	rbm38	100	85.039	ENSPREG00000007398	rbm38	100	87.008	Poecilia_reticulata
ENSMAMG00000024135	rbm38	91	59.227	ENSPCOG00000026201	RBM38	84	82.524	Propithecus_coquereli
ENSMAMG00000024135	rbm38	75	40.838	ENSPVAG00000006457	RBM38	92	39.004	Pteropus_vampyrus
ENSMAMG00000024135	rbm38	98	64.940	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSMAMG00000024135	rbm38	100	90.800	ENSPNYG00000021373	rbm38	100	90.800	Pundamilia_nyererei
ENSMAMG00000024135	rbm38	95	61.667	ENSPNAG00000010596	rbm38	96	61.667	Pygocentrus_nattereri
ENSMAMG00000024135	rbm38	98	61.600	ENSPNAG00000015123	-	91	81.356	Pygocentrus_nattereri
ENSMAMG00000024135	rbm38	91	58.798	ENSRNOG00000006420	Rbm38	89	58.798	Rattus_norvegicus
ENSMAMG00000024135	rbm38	93	50.213	ENSRROG00000036388	-	89	50.213	Rhinopithecus_roxellana
ENSMAMG00000024135	rbm38	91	57.511	ENSSBOG00000031053	RBM38	92	84.848	Saimiri_boliviensis_boliviensis
ENSMAMG00000024135	rbm38	98	58.400	ENSSFOG00015004453	rbm38	100	62.000	Scleropages_formosus
ENSMAMG00000024135	rbm38	100	95.600	ENSSDUG00000022611	rbm38	100	95.600	Seriola_dumerili
ENSMAMG00000024135	rbm38	98	65.476	ENSSDUG00000021082	RBM38	100	67.059	Seriola_dumerili
ENSMAMG00000024135	rbm38	98	65.476	ENSSLDG00000011778	RBM38	100	67.059	Seriola_lalandi_dorsalis
ENSMAMG00000024135	rbm38	100	95.600	ENSSLDG00000010845	rbm38	100	95.600	Seriola_lalandi_dorsalis
ENSMAMG00000024135	rbm38	98	65.079	ENSSPAG00000020989	RBM38	100	67.059	Stegastes_partitus
ENSMAMG00000024135	rbm38	100	94.400	ENSSPAG00000011113	rbm38	100	94.400	Stegastes_partitus
ENSMAMG00000024135	rbm38	91	59.657	ENSSSCG00000007504	RBM38	89	59.657	Sus_scrofa
ENSMAMG00000024135	rbm38	98	62.451	ENSTRUG00000019869	-	100	64.032	Takifugu_rubripes
ENSMAMG00000024135	rbm38	100	85.600	ENSTRUG00000024954	rbm38	100	86.000	Takifugu_rubripes
ENSMAMG00000024135	rbm38	93	64.286	ENSTNIG00000007093	-	100	65.546	Tetraodon_nigroviridis
ENSMAMG00000024135	rbm38	91	59.227	ENSUAMG00000019780	RBM38	89	59.227	Ursus_americanus
ENSMAMG00000024135	rbm38	91	59.227	ENSVVUG00000017246	RBM38	89	59.227	Vulpes_vulpes
ENSMAMG00000024135	rbm38	93	56.356	ENSXETG00000011268	rbm38	99	57.261	Xenopus_tropicalis
ENSMAMG00000024135	rbm38	52	75.000	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSMAMG00000024135	rbm38	100	88.400	ENSXMAG00000023662	rbm38	100	88.400	Xiphophorus_maculatus