EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000001286 (Gene tree)
Gene ID: 101823001
Gene Symbol: Ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 26851 bases
Position: chrKB708139.1:10965940-10992790
Accession: 101823001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000001739	YTH	PF04146.15	9e-40	1	1
ENSMAUP00000001737	YTH	PF04146.15	9.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000001775	-	3265	XM_005068190	ENSMAUP00000001737	733 (aa)	XP_005068247	A0A1U7Q4C8
ENSMAUT00000001777	-	3187	XM_005068192	ENSMAUP00000001739	707 (aa)	XP_005068249	A0A1U7QIG2

Gene Model

Click here to download ENSMAUG00000001286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000001286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000001286	Ythdc1	100	97.143	ENSG00000083896	YTHDC1	100	97.143	Homo_sapiens
ENSMAUG00000001286	Ythdc1	57	59.102	ENSAPOG00000013997	ythdc1	57	62.250	Acanthochromis_polyacanthus
ENSMAUG00000001286	Ythdc1	100	93.160	ENSAMEG00000005688	YTHDC1	100	93.160	Ailuropoda_melanoleuca
ENSMAUG00000001286	Ythdc1	71	57.412	ENSACIG00000019728	ythdc1	80	59.398	Amphilophus_citrinellus
ENSMAUG00000001286	Ythdc1	56	61.687	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSMAUG00000001286	Ythdc1	50	64.151	ENSAPEG00000000618	ythdc1	53	68.661	Amphiprion_percula
ENSMAUG00000001286	Ythdc1	92	83.333	ENSAPLG00000009921	YTHDC1	92	83.631	Anas_platyrhynchos
ENSMAUG00000001286	Ythdc1	93	83.138	ENSACAG00000009697	YTHDC1	93	82.258	Anolis_carolinensis
ENSMAUG00000001286	Ythdc1	100	96.901	ENSANAG00000001522	YTHDC1	100	96.901	Aotus_nancymaae
ENSMAUG00000001286	Ythdc1	93	51.679	ENSACLG00000019371	ythdc1	59	66.029	Astatotilapia_calliptera
ENSMAUG00000001286	Ythdc1	93	64.793	ENSAMXG00000006978	ythdc1	92	65.379	Astyanax_mexicanus
ENSMAUG00000001286	Ythdc1	93	91.642	ENSBTAG00000015572	YTHDC1	93	92.229	Bos_taurus
ENSMAUG00000001286	Ythdc1	100	97.042	ENSCJAG00000009934	YTHDC1	100	97.042	Callithrix_jacchus
ENSMAUG00000001286	Ythdc1	100	93.023	ENSCAFG00000002821	YTHDC1	100	93.023	Canis_familiaris
ENSMAUG00000001286	Ythdc1	100	93.023	ENSCAFG00020027112	YTHDC1	100	93.023	Canis_lupus_dingo
ENSMAUG00000001286	Ythdc1	91	86.870	ENSCHIG00000004810	YTHDC1	95	92.000	Capra_hircus
ENSMAUG00000001286	Ythdc1	100	97.038	ENSTSYG00000011668	YTHDC1	100	97.038	Carlito_syrichta
ENSMAUG00000001286	Ythdc1	90	70.110	ENSCAPG00000008722	YTHDC1	90	69.040	Cavia_aperea
ENSMAUG00000001286	Ythdc1	100	88.980	ENSCPOG00000010929	YTHDC1	100	88.980	Cavia_porcellus
ENSMAUG00000001286	Ythdc1	100	97.179	ENSCCAG00000035754	YTHDC1	100	97.179	Cebus_capucinus
ENSMAUG00000001286	Ythdc1	100	97.011	ENSCATG00000036320	YTHDC1	100	97.011	Cercocebus_atys
ENSMAUG00000001286	Ythdc1	99	92.828	ENSCLAG00000005482	YTHDC1	99	92.828	Chinchilla_lanigera
ENSMAUG00000001286	Ythdc1	100	96.196	ENSCSAG00000005252	YTHDC1	100	96.196	Chlorocebus_sabaeus
ENSMAUG00000001286	Ythdc1	92	85.272	ENSCPBG00000021965	YTHDC1	94	85.366	Chrysemys_picta_bellii
ENSMAUG00000001286	Ythdc1	100	97.042	ENSCANG00000004769	YTHDC1	100	97.042	Colobus_angolensis_palliatus
ENSMAUG00000001286	Ythdc1	100	99.591	ENSCGRG00001000816	Ythdc1	100	99.591	Cricetulus_griseus_chok1gshd
ENSMAUG00000001286	Ythdc1	99	99.570	ENSCGRG00000009807	Ythdc1	99	99.570	Cricetulus_griseus_crigri
ENSMAUG00000001286	Ythdc1	56	60.508	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSMAUG00000001286	Ythdc1	56	60.093	ENSCVAG00000022349	ythdc1	94	53.652	Cyprinodon_variegatus
ENSMAUG00000001286	Ythdc1	93	63.772	ENSDARG00000051953	ythdc1	58	78.133	Danio_rerio
ENSMAUG00000001286	Ythdc1	93	92.669	ENSDNOG00000004949	YTHDC1	93	93.109	Dasypus_novemcinctus
ENSMAUG00000001286	Ythdc1	99	96.561	ENSDORG00000013045	Ythdc1	100	96.434	Dipodomys_ordii
ENSMAUG00000001286	Ythdc1	77	95.636	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSMAUG00000001286	Ythdc1	100	94.993	ENSEASG00005018383	YTHDC1	100	94.993	Equus_asinus_asinus
ENSMAUG00000001286	Ythdc1	100	93.023	ENSECAG00000018303	YTHDC1	100	93.023	Equus_caballus
ENSMAUG00000001286	Ythdc1	93	91.349	ENSEEUG00000015466	YTHDC1	93	91.935	Erinaceus_europaeus
ENSMAUG00000001286	Ythdc1	93	62.009	ENSELUG00000014029	ythdc1	95	61.168	Esox_lucius
ENSMAUG00000001286	Ythdc1	93	93.303	ENSFCAG00000026791	YTHDC1	93	92.826	Felis_catus
ENSMAUG00000001286	Ythdc1	69	87.838	ENSFALG00000006581	YTHDC1	87	91.885	Ficedula_albicollis
ENSMAUG00000001286	Ythdc1	92	93.145	ENSFDAG00000018560	YTHDC1	92	95.349	Fukomys_damarensis
ENSMAUG00000001286	Ythdc1	66	60.317	ENSFHEG00000001286	ythdc1	60	55.000	Fundulus_heteroclitus
ENSMAUG00000001286	Ythdc1	63	63.475	ENSGMOG00000018815	ythdc1	73	63.475	Gadus_morhua
ENSMAUG00000001286	Ythdc1	92	85.583	ENSGALG00000035906	YTHDC1	85	85.604	Gallus_gallus
ENSMAUG00000001286	Ythdc1	50	64.875	ENSGAFG00000001759	ythdc1	54	67.029	Gambusia_affinis
ENSMAUG00000001286	Ythdc1	57	62.093	ENSGACG00000015486	ythdc1	57	62.530	Gasterosteus_aculeatus
ENSMAUG00000001286	Ythdc1	93	86.510	ENSGAGG00000007108	YTHDC1	93	85.484	Gopherus_agassizii
ENSMAUG00000001286	Ythdc1	100	97.011	ENSGGOG00000021958	YTHDC1	100	97.011	Gorilla_gorilla
ENSMAUG00000001286	Ythdc1	93	51.825	ENSHBUG00000019288	ythdc1	59	66.029	Haplochromis_burtoni
ENSMAUG00000001286	Ythdc1	100	92.517	ENSHGLG00000006319	-	100	92.517	Heterocephalus_glaber_female
ENSMAUG00000001286	Ythdc1	95	69.120	ENSHGLG00000003239	-	86	71.598	Heterocephalus_glaber_female
ENSMAUG00000001286	Ythdc1	95	67.672	ENSHGLG00100008060	-	86	70.103	Heterocephalus_glaber_male
ENSMAUG00000001286	Ythdc1	93	94.689	ENSHGLG00100001556	-	92	94.494	Heterocephalus_glaber_male
ENSMAUG00000001286	Ythdc1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSMAUG00000001286	Ythdc1	93	66.619	ENSIPUG00000018136	ythdc1	61	82.005	Ictalurus_punctatus
ENSMAUG00000001286	Ythdc1	100	96.875	ENSSTOG00000013652	YTHDC1	100	96.875	Ictidomys_tridecemlineatus
ENSMAUG00000001286	Ythdc1	92	91.518	ENSJJAG00000010268	Ythdc1	93	92.560	Jaculus_jaculus
ENSMAUG00000001286	Ythdc1	57	59.417	ENSKMAG00000006483	ythdc1	85	65.238	Kryptolebias_marmoratus
ENSMAUG00000001286	Ythdc1	65	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSMAUG00000001286	Ythdc1	87	73.023	ENSLACG00000004893	YTHDC1	92	73.107	Latimeria_chalumnae
ENSMAUG00000001286	Ythdc1	93	72.515	ENSLOCG00000003045	ythdc1	92	86.792	Lepisosteus_oculatus
ENSMAUG00000001286	Ythdc1	93	93.245	ENSLAFG00000021592	YTHDC1	99	98.281	Loxodonta_africana
ENSMAUG00000001286	Ythdc1	100	97.147	ENSMFAG00000031927	YTHDC1	100	97.147	Macaca_fascicularis
ENSMAUG00000001286	Ythdc1	100	96.060	ENSMMUG00000002265	YTHDC1	100	96.978	Macaca_mulatta
ENSMAUG00000001286	Ythdc1	100	97.042	ENSMNEG00000033751	YTHDC1	100	97.042	Macaca_nemestrina
ENSMAUG00000001286	Ythdc1	100	96.901	ENSMLEG00000042147	YTHDC1	100	96.901	Mandrillus_leucophaeus
ENSMAUG00000001286	Ythdc1	56	61.631	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSMAUG00000001286	Ythdc1	93	51.679	ENSMZEG00005023173	ythdc1	59	66.029	Maylandia_zebra
ENSMAUG00000001286	Ythdc1	93	83.431	ENSMGAG00000010391	YTHDC1	92	85.044	Meleagris_gallopavo
ENSMAUG00000001286	Ythdc1	100	94.882	ENSMICG00000034640	YTHDC1	100	94.882	Microcebus_murinus
ENSMAUG00000001286	Ythdc1	100	98.367	ENSMOCG00000020201	Ythdc1	100	98.367	Microtus_ochrogaster
ENSMAUG00000001286	Ythdc1	96	50.847	ENSMODG00000010076	-	96	51.395	Monodelphis_domestica
ENSMAUG00000001286	Ythdc1	65	56.695	ENSMODG00000009173	-	88	60.190	Monodelphis_domestica
ENSMAUG00000001286	Ythdc1	87	69.213	ENSMODG00000014337	-	95	69.554	Monodelphis_domestica
ENSMAUG00000001286	Ythdc1	93	87.959	ENSMODG00000020754	-	92	87.078	Monodelphis_domestica
ENSMAUG00000001286	Ythdc1	51	65.699	ENSMALG00000013412	ythdc1	56	68.768	Monopterus_albus
ENSMAUG00000001286	Ythdc1	100	97.829	MGP_CAROLIEiJ_G0027347	Ythdc1	100	97.829	Mus_caroli
ENSMAUG00000001286	Ythdc1	100	97.693	ENSMUSG00000035851	Ythdc1	100	97.693	Mus_musculus
ENSMAUG00000001286	Ythdc1	100	97.965	MGP_PahariEiJ_G0017126	Ythdc1	100	97.965	Mus_pahari
ENSMAUG00000001286	Ythdc1	100	97.965	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.965	Mus_spretus
ENSMAUG00000001286	Ythdc1	99	94.897	ENSMLUG00000016300	YTHDC1	100	94.897	Myotis_lucifugus
ENSMAUG00000001286	Ythdc1	59	95.476	ENSNGAG00000024000	Ythdc1	93	95.249	Nannospalax_galili
ENSMAUG00000001286	Ythdc1	60	62.121	ENSNBRG00000007663	ythdc1	70	65.777	Neolamprologus_brichardi
ENSMAUG00000001286	Ythdc1	99	96.149	ENSNLEG00000009202	YTHDC1	99	96.149	Nomascus_leucogenys
ENSMAUG00000001286	Ythdc1	82	81.605	ENSMEUG00000007128	YTHDC1	81	81.605	Notamacropus_eugenii
ENSMAUG00000001286	Ythdc1	75	97.734	ENSOPRG00000008986	YTHDC1	74	97.734	Ochotona_princeps
ENSMAUG00000001286	Ythdc1	93	94.046	ENSODEG00000001715	YTHDC1	93	92.217	Octodon_degus
ENSMAUG00000001286	Ythdc1	93	52.117	ENSONIG00000012651	ythdc1	59	66.507	Oreochromis_niloticus
ENSMAUG00000001286	Ythdc1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.215	Ornithorhynchus_anatinus
ENSMAUG00000001286	Ythdc1	93	80.409	ENSOCUG00000015886	YTHDC1	57	93.596	Oryctolagus_cuniculus
ENSMAUG00000001286	Ythdc1	56	61.165	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSMAUG00000001286	Ythdc1	56	60.145	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSMAUG00000001286	Ythdc1	56	61.275	ENSOMEG00000000551	ythdc1	94	54.235	Oryzias_melastigma
ENSMAUG00000001286	Ythdc1	93	95.742	ENSOGAG00000003362	YTHDC1	93	95.742	Otolemur_garnettii
ENSMAUG00000001286	Ythdc1	93	91.642	ENSOARG00000008633	YTHDC1	93	92.229	Ovis_aries
ENSMAUG00000001286	Ythdc1	100	97.143	ENSPPAG00000041315	YTHDC1	100	97.143	Pan_paniscus
ENSMAUG00000001286	Ythdc1	100	95.799	ENSPPRG00000011979	YTHDC1	100	95.799	Panthera_pardus
ENSMAUG00000001286	Ythdc1	92	93.016	ENSPTIG00000015527	YTHDC1	93	93.759	Panthera_tigris_altaica
ENSMAUG00000001286	Ythdc1	100	97.143	ENSPTRG00000016105	YTHDC1	100	97.143	Pan_troglodytes
ENSMAUG00000001286	Ythdc1	100	97.011	ENSPANG00000021590	YTHDC1	100	97.011	Papio_anubis
ENSMAUG00000001286	Ythdc1	93	67.486	ENSPKIG00000018497	ythdc1	93	67.672	Paramormyrops_kingsleyae
ENSMAUG00000001286	Ythdc1	92	85.587	ENSPSIG00000002782	YTHDC1	92	84.547	Pelodiscus_sinensis
ENSMAUG00000001286	Ythdc1	55	56.364	ENSPMGG00000000970	-	72	64.460	Periophthalmus_magnuspinnatus
ENSMAUG00000001286	Ythdc1	99	98.999	ENSPEMG00000013850	Ythdc1	100	98.999	Peromyscus_maniculatus_bairdii
ENSMAUG00000001286	Ythdc1	93	88.550	ENSPCIG00000006870	YTHDC1	92	87.634	Phascolarctos_cinereus
ENSMAUG00000001286	Ythdc1	56	60.000	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSMAUG00000001286	Ythdc1	56	60.000	ENSPLAG00000011079	ythdc1	85	65.385	Poecilia_latipinna
ENSMAUG00000001286	Ythdc1	56	60.000	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSMAUG00000001286	Ythdc1	56	60.302	ENSPREG00000016973	ythdc1	93	49.698	Poecilia_reticulata
ENSMAUG00000001286	Ythdc1	87	96.094	ENSPPYG00000014726	YTHDC1	100	96.094	Pongo_abelii
ENSMAUG00000001286	Ythdc1	77	89.091	ENSPCAG00000009607	YTHDC1	75	88.636	Procavia_capensis
ENSMAUG00000001286	Ythdc1	93	89.574	ENSPCOG00000019105	YTHDC1	92	90.749	Propithecus_coquereli
ENSMAUG00000001286	Ythdc1	93	90.219	ENSPVAG00000015551	YTHDC1	93	90.219	Pteropus_vampyrus
ENSMAUG00000001286	Ythdc1	93	51.679	ENSPNYG00000011687	ythdc1	59	66.029	Pundamilia_nyererei
ENSMAUG00000001286	Ythdc1	93	69.154	ENSPNAG00000028365	ythdc1	93	68.383	Pygocentrus_nattereri
ENSMAUG00000001286	Ythdc1	100	97.429	ENSRNOG00000001996	Ythdc1	100	97.429	Rattus_norvegicus
ENSMAUG00000001286	Ythdc1	99	95.873	ENSRBIG00000028279	YTHDC1	99	95.873	Rhinopithecus_bieti
ENSMAUG00000001286	Ythdc1	100	97.042	ENSRROG00000035028	YTHDC1	100	97.042	Rhinopithecus_roxellana
ENSMAUG00000001286	Ythdc1	100	97.147	ENSSBOG00000022353	YTHDC1	100	97.147	Saimiri_boliviensis_boliviensis
ENSMAUG00000001286	Ythdc1	93	86.784	ENSSHAG00000002538	YTHDC1	91	86.905	Sarcophilus_harrisii
ENSMAUG00000001286	Ythdc1	93	67.770	ENSSFOG00015003298	ythdc1	60	84.186	Scleropages_formosus
ENSMAUG00000001286	Ythdc1	56	60.235	ENSSMAG00000009086	ythdc1	60	65.707	Scophthalmus_maximus
ENSMAUG00000001286	Ythdc1	56	60.775	ENSSDUG00000022008	ythdc1	94	56.788	Seriola_dumerili
ENSMAUG00000001286	Ythdc1	56	60.775	ENSSLDG00000007926	ythdc1	59	66.986	Seriola_lalandi_dorsalis
ENSMAUG00000001286	Ythdc1	79	95.392	ENSSARG00000010960	YTHDC1	100	95.392	Sorex_araneus
ENSMAUG00000001286	Ythdc1	93	81.791	ENSSPUG00000009357	YTHDC1	94	81.297	Sphenodon_punctatus
ENSMAUG00000001286	Ythdc1	57	61.036	ENSSPAG00000011449	ythdc1	94	55.507	Stegastes_partitus
ENSMAUG00000001286	Ythdc1	100	91.633	ENSSSCG00000035505	YTHDC1	100	91.633	Sus_scrofa
ENSMAUG00000001286	Ythdc1	93	85.044	ENSTGUG00000004452	-	92	84.604	Taeniopygia_guttata
ENSMAUG00000001286	Ythdc1	64	61.224	ENSTRUG00000010142	ythdc1	69	71.795	Takifugu_rubripes
ENSMAUG00000001286	Ythdc1	86	58.849	ENSTNIG00000013243	ythdc1	89	64.384	Tetraodon_nigroviridis
ENSMAUG00000001286	Ythdc1	93	86.050	ENSTBEG00000011546	YTHDC1	92	85.756	Tupaia_belangeri
ENSMAUG00000001286	Ythdc1	93	91.374	ENSTTRG00000005083	YTHDC1	93	91.813	Tursiops_truncatus
ENSMAUG00000001286	Ythdc1	93	92.931	ENSUAMG00000010388	YTHDC1	100	92.931	Ursus_americanus
ENSMAUG00000001286	Ythdc1	99	82.094	ENSUMAG00000013668	YTHDC1	98	82.094	Ursus_maritimus
ENSMAUG00000001286	Ythdc1	100	92.653	ENSVPAG00000009040	YTHDC1	100	92.653	Vicugna_pacos
ENSMAUG00000001286	Ythdc1	99	92.206	ENSVVUG00000005387	YTHDC1	100	92.794	Vulpes_vulpes
ENSMAUG00000001286	Ythdc1	92	73.088	ENSXETG00000017960	ythdc1	91	73.235	Xenopus_tropicalis
ENSMAUG00000001286	Ythdc1	56	59.762	ENSXMAG00000005196	ythdc1	61	64.663	Xiphophorus_maculatus