EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000001536 (Gene tree)
Gene ID: 101832777
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39-like
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 13244 bases
Position: chrKB708137.1:18095323-18108566
Accession: 101832777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	1	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	2	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	3	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	4	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	5	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	6	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	7	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	8	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	9	10
ENSMAUP00000002023	zf-C2H2	PF00096.26	1.2e-53	10	10
ENSMAUP00000002023	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000002098	-	2982	XM_013111526	ENSMAUP00000002023	712 (aa)	XP_012966980	-

Gene Model

Click here to download ENSMAUG00000001536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000001536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000001536	Zfp39	74	51.965	ENSMAUG00000005691	-	89	51.965
ENSMAUG00000001536	Zfp39	59	39.416	ENSMAUG00000008119	Snai2	52	39.416
ENSMAUG00000001536	Zfp39	63	45.673	ENSMAUG00000003007	Zfp628	61	37.801
ENSMAUG00000001536	Zfp39	93	46.067	ENSMAUG00000007713	Zfp868	97	46.067
ENSMAUG00000001536	Zfp39	65	43.820	ENSMAUG00000004129	Patz1	53	30.592
ENSMAUG00000001536	Zfp39	87	34.653	ENSMAUG00000006768	Prdm5	82	40.397
ENSMAUG00000001536	Zfp39	58	48.980	ENSMAUG00000015814	Sall4	59	42.623
ENSMAUG00000001536	Zfp39	59	39.117	ENSMAUG00000001376	Zbtb17	57	39.117
ENSMAUG00000001536	Zfp39	92	53.807	ENSMAUG00000007219	Zfp61	55	60.000
ENSMAUG00000001536	Zfp39	65	46.694	ENSMAUG00000009785	Zkscan3	54	46.694
ENSMAUG00000001536	Zfp39	60	38.147	ENSMAUG00000005776	Repin1	91	38.420
ENSMAUG00000001536	Zfp39	63	33.333	ENSMAUG00000006878	Zfp319	91	33.613
ENSMAUG00000001536	Zfp39	92	50.000	ENSMAUG00000014247	-	100	50.000
ENSMAUG00000001536	Zfp39	64	38.802	ENSMAUG00000009945	Zfp672	89	45.217
ENSMAUG00000001536	Zfp39	93	52.713	ENSMAUG00000004844	-	98	52.713
ENSMAUG00000001536	Zfp39	73	34.177	ENSMAUG00000015448	Zfp423	98	34.177
ENSMAUG00000001536	Zfp39	67	32.394	ENSMAUG00000005232	Zfp784	66	33.803
ENSMAUG00000001536	Zfp39	64	45.084	ENSMAUG00000000735	Zfp354a	79	45.084
ENSMAUG00000001536	Zfp39	79	41.071	ENSMAUG00000015263	-	73	41.568
ENSMAUG00000001536	Zfp39	93	45.035	ENSMAUG00000009331	-	99	45.855
ENSMAUG00000001536	Zfp39	92	44.421	ENSMAUG00000017074	Zfp26	97	44.421
ENSMAUG00000001536	Zfp39	71	48.387	ENSMAUG00000000939	-	85	48.387
ENSMAUG00000001536	Zfp39	93	44.784	ENSMAUG00000005974	-	97	44.784
ENSMAUG00000001536	Zfp39	58	38.182	ENSMAUG00000011903	Maz	60	32.178
ENSMAUG00000001536	Zfp39	93	47.590	ENSMAUG00000016437	-	99	48.718
ENSMAUG00000001536	Zfp39	62	34.254	ENSMAUG00000000806	Zbtb41	61	34.254
ENSMAUG00000001536	Zfp39	70	51.220	ENSMAUG00000010647	Zfp882	95	51.220
ENSMAUG00000001536	Zfp39	93	55.418	ENSMAUG00000007597	2610008E11Rik	95	55.418
ENSMAUG00000001536	Zfp39	65	53.274	ENSMAUG00000008812	Zfp583	84	53.274
ENSMAUG00000001536	Zfp39	93	53.750	ENSMAUG00000000179	Zfp879	98	53.750
ENSMAUG00000001536	Zfp39	62	38.519	ENSMAUG00000001685	Snai3	53	38.519
ENSMAUG00000001536	Zfp39	59	37.344	ENSMAUG00000016253	Gtf3a	71	38.835
ENSMAUG00000001536	Zfp39	61	43.820	ENSMAUG00000015438	Zfp64	71	33.699
ENSMAUG00000001536	Zfp39	62	44.030	ENSMAUG00000021273	-	100	44.030
ENSMAUG00000001536	Zfp39	62	30.947	ENSMAUG00000018252	Zfp574	70	30.716
ENSMAUG00000001536	Zfp39	93	56.612	ENSMAUG00000007745	Zfp1	99	56.612
ENSMAUG00000001536	Zfp39	60	51.351	ENSMAUG00000009641	Zfp768	56	47.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000001536	Zfp39	93	59.607	ENSCPOG00000036704	-	99	59.607	Cavia_porcellus
ENSMAUG00000001536	Zfp39	99	93.220	ENSCGRG00001002406	Zfp39	99	93.220	Cricetulus_griseus_chok1gshd
ENSMAUG00000001536	Zfp39	99	93.079	ENSCGRG00000002730	Zfp39	99	93.079	Cricetulus_griseus_crigri
ENSMAUG00000001536	Zfp39	99	71.893	ENSJJAG00000018925	Zfp39	99	71.893	Jaculus_jaculus
ENSMAUG00000001536	Zfp39	98	83.595	ENSMOCG00000017961	Zfp39	99	83.595	Microtus_ochrogaster
ENSMAUG00000001536	Zfp39	99	81.805	MGP_PahariEiJ_G0017548	Zfp39	99	81.805	Mus_pahari
ENSMAUG00000001536	Zfp39	99	71.268	ENSNGAG00000019853	Zfp39	99	71.268	Nannospalax_galili
ENSMAUG00000001536	Zfp39	60	79.333	ENSODEG00000000805	-	100	79.333	Octodon_degus
ENSMAUG00000001536	Zfp39	99	88.999	ENSPEMG00000009428	Zfp39	99	88.999	Peromyscus_maniculatus_bairdii
ENSMAUG00000001536	Zfp39	99	79.690	ENSRNOG00000014712	Zfp39	99	79.690	Rattus_norvegicus