EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000001946 (Gene tree)
Gene ID: 101841925
Gene Symbol: Polr1d
Alias: 1110003G10Rik|16kDa|Rpo1-3|mRPA16
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 35414 bases
Position: chrKB708272.1:4174921-4210334
Accession: 101841925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000002367	RNA_pol_L_2	PF13656.6	8.4e-29	1	1
ENSMAUP00000002367	RNA_pol_L	PF01193.24	7.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000002623	-	634	XM_005083185	ENSMAUP00000002367	133 (aa)	XP_005083242	A0A1U7R8C3
ENSMAUT00000002620	-	102	-	ENSMAUP00000002364	33 (aa)	-	UPI00001A92E3

Gene Model

Click here to download ENSMAUG00000001946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000001946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000001946	Polr1d	77	33.010	ENSMAUG00000013049	Polr2j	85	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000001946	Polr1d	100	96.241	ENSG00000186184	POLR1D	100	96.552	Homo_sapiens
ENSMAUG00000001946	Polr1d	83	68.468	ENSAPOG00000021882	polr1d	98	68.468	Acanthochromis_polyacanthus
ENSMAUG00000001946	Polr1d	94	95.200	ENSAMEG00000019095	POLR1D	100	95.200	Ailuropoda_melanoleuca
ENSMAUG00000001946	Polr1d	75	74.000	ENSACIG00000013328	polr1d	87	74.000	Amphilophus_citrinellus
ENSMAUG00000001946	Polr1d	84	67.857	ENSAOCG00000018500	polr1d	98	67.857	Amphiprion_ocellaris
ENSMAUG00000001946	Polr1d	84	66.964	ENSAPEG00000009489	polr1d	98	66.964	Amphiprion_percula
ENSMAUG00000001946	Polr1d	86	64.035	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSMAUG00000001946	Polr1d	83	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSMAUG00000001946	Polr1d	100	95.489	ENSANAG00000024486	POLR1D	100	95.489	Aotus_nancymaae
ENSMAUG00000001946	Polr1d	77	73.529	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSMAUG00000001946	Polr1d	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSMAUG00000001946	Polr1d	100	93.985	ENSBTAG00000033252	-	100	93.985	Bos_taurus
ENSMAUG00000001946	Polr1d	100	93.985	ENSBTAG00000008642	POLR1D	100	93.985	Bos_taurus
ENSMAUG00000001946	Polr1d	62	39.024	WBGene00010230	rpac-19	57	39.024	Caenorhabditis_elegans
ENSMAUG00000001946	Polr1d	100	94.737	ENSCJAG00000044669	POLR1D	100	94.737	Callithrix_jacchus
ENSMAUG00000001946	Polr1d	100	95.489	ENSCAFG00000006755	POLR1D	100	95.489	Canis_familiaris
ENSMAUG00000001946	Polr1d	100	94.737	ENSCHIG00000021910	POLR1D	100	94.737	Capra_hircus
ENSMAUG00000001946	Polr1d	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSMAUG00000001946	Polr1d	96	81.538	ENSTSYG00000034852	-	98	81.513	Carlito_syrichta
ENSMAUG00000001946	Polr1d	96	53.906	ENSCAPG00000006058	-	99	53.906	Cavia_aperea
ENSMAUG00000001946	Polr1d	96	54.688	ENSCPOG00000030450	-	99	54.688	Cavia_porcellus
ENSMAUG00000001946	Polr1d	100	93.985	ENSCCAG00000021349	-	100	93.985	Cebus_capucinus
ENSMAUG00000001946	Polr1d	100	78.195	ENSCCAG00000020191	-	100	78.195	Cebus_capucinus
ENSMAUG00000001946	Polr1d	100	94.737	ENSCATG00000030710	-	100	94.737	Cercocebus_atys
ENSMAUG00000001946	Polr1d	100	84.211	ENSCATG00000022900	-	100	84.211	Cercocebus_atys
ENSMAUG00000001946	Polr1d	93	93.548	ENSCLAG00000017623	POLR1D	100	93.548	Chinchilla_lanigera
ENSMAUG00000001946	Polr1d	73	77.320	ENSCPBG00000004719	POLR1D	96	77.320	Chrysemys_picta_bellii
ENSMAUG00000001946	Polr1d	100	91.729	ENSCANG00000037694	-	100	91.729	Colobus_angolensis_palliatus
ENSMAUG00000001946	Polr1d	100	94.737	ENSCANG00000028632	-	100	94.737	Colobus_angolensis_palliatus
ENSMAUG00000001946	Polr1d	100	99.248	ENSCGRG00001021251	Polr1d	100	99.248	Cricetulus_griseus_chok1gshd
ENSMAUG00000001946	Polr1d	100	99.248	ENSCGRG00000011639	Polr1d	100	99.248	Cricetulus_griseus_crigri
ENSMAUG00000001946	Polr1d	85	65.487	ENSCSEG00000018268	polr1d	97	65.487	Cynoglossus_semilaevis
ENSMAUG00000001946	Polr1d	79	72.381	ENSCVAG00000018527	polr1d	92	72.381	Cyprinodon_variegatus
ENSMAUG00000001946	Polr1d	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSMAUG00000001946	Polr1d	100	91.791	ENSDNOG00000046247	-	100	91.791	Dasypus_novemcinctus
ENSMAUG00000001946	Polr1d	100	93.985	ENSDNOG00000043676	-	100	93.985	Dasypus_novemcinctus
ENSMAUG00000001946	Polr1d	100	95.489	ENSDORG00000029155	Polr1d	100	95.489	Dipodomys_ordii
ENSMAUG00000001946	Polr1d	65	41.860	FBgn0086447	l(2)37Cg	81	41.860	Drosophila_melanogaster
ENSMAUG00000001946	Polr1d	93	88.710	ENSETEG00000012797	POLR1D	100	88.710	Echinops_telfairi
ENSMAUG00000001946	Polr1d	65	70.115	ENSEBUG00000011748	polr1d	61	70.115	Eptatretus_burgeri
ENSMAUG00000001946	Polr1d	96	94.531	ENSEASG00005022487	POLR1D	99	94.531	Equus_asinus_asinus
ENSMAUG00000001946	Polr1d	93	94.355	ENSEEUG00000013144	POLR1D	100	94.355	Erinaceus_europaeus
ENSMAUG00000001946	Polr1d	80	66.981	ENSELUG00000005105	rpac2	93	66.981	Esox_lucius
ENSMAUG00000001946	Polr1d	100	94.737	ENSFCAG00000030162	POLR1D	100	94.737	Felis_catus
ENSMAUG00000001946	Polr1d	72	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSMAUG00000001946	Polr1d	100	93.233	ENSFDAG00000004463	POLR1D	100	93.233	Fukomys_damarensis
ENSMAUG00000001946	Polr1d	82	72.727	ENSFHEG00000015410	polr1d	96	72.727	Fundulus_heteroclitus
ENSMAUG00000001946	Polr1d	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSMAUG00000001946	Polr1d	88	67.797	ENSGACG00000018585	polr1d	100	67.797	Gasterosteus_aculeatus
ENSMAUG00000001946	Polr1d	81	75.926	ENSGAGG00000008503	POLR1D	95	75.926	Gopherus_agassizii
ENSMAUG00000001946	Polr1d	100	96.241	ENSGGOG00000004235	POLR1D	100	96.241	Gorilla_gorilla
ENSMAUG00000001946	Polr1d	80	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSMAUG00000001946	Polr1d	100	92.481	ENSHGLG00000003202	POLR1D	100	92.481	Heterocephalus_glaber_female
ENSMAUG00000001946	Polr1d	100	92.481	ENSHGLG00100009393	POLR1D	100	92.481	Heterocephalus_glaber_male
ENSMAUG00000001946	Polr1d	80	68.224	ENSHCOG00000003258	polr1d	94	68.224	Hippocampus_comes
ENSMAUG00000001946	Polr1d	79	74.286	ENSIPUG00000014810	polr1d	91	74.286	Ictalurus_punctatus
ENSMAUG00000001946	Polr1d	100	96.241	ENSSTOG00000013877	POLR1D	100	96.241	Ictidomys_tridecemlineatus
ENSMAUG00000001946	Polr1d	95	75.397	ENSJJAG00000021667	-	75	75.397	Jaculus_jaculus
ENSMAUG00000001946	Polr1d	97	89.474	ENSJJAG00000022671	-	100	93.333	Jaculus_jaculus
ENSMAUG00000001946	Polr1d	80	67.925	ENSKMAG00000015256	polr1d	93	67.925	Kryptolebias_marmoratus
ENSMAUG00000001946	Polr1d	79	71.429	ENSLBEG00000015919	polr1d	92	71.429	Labrus_bergylta
ENSMAUG00000001946	Polr1d	86	65.217	ENSLACG00000006810	POLR1D	95	65.217	Latimeria_chalumnae
ENSMAUG00000001946	Polr1d	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSMAUG00000001946	Polr1d	100	87.970	ENSLAFG00000032290	POLR1D	100	87.970	Loxodonta_africana
ENSMAUG00000001946	Polr1d	94	94.400	ENSMFAG00000045264	POLR1D	97	94.400	Macaca_fascicularis
ENSMAUG00000001946	Polr1d	87	95.690	ENSMMUG00000020386	POLR1D	100	95.690	Macaca_mulatta
ENSMAUG00000001946	Polr1d	100	75.940	ENSMMUG00000041570	-	100	75.940	Macaca_mulatta
ENSMAUG00000001946	Polr1d	100	78.947	ENSMNEG00000038120	-	100	78.947	Macaca_nemestrina
ENSMAUG00000001946	Polr1d	100	95.489	ENSMNEG00000008630	-	100	95.489	Macaca_nemestrina
ENSMAUG00000001946	Polr1d	100	95.489	ENSMLEG00000041048	-	100	95.489	Mandrillus_leucophaeus
ENSMAUG00000001946	Polr1d	100	84.962	ENSMLEG00000032251	-	100	84.962	Mandrillus_leucophaeus
ENSMAUG00000001946	Polr1d	76	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSMAUG00000001946	Polr1d	77	73.529	ENSMZEG00005006638	polr1d	90	73.529	Maylandia_zebra
ENSMAUG00000001946	Polr1d	69	79.348	ENSMGAG00000005322	POLR1D	84	79.348	Meleagris_gallopavo
ENSMAUG00000001946	Polr1d	100	93.985	ENSMICG00000016883	-	100	93.985	Microcebus_murinus
ENSMAUG00000001946	Polr1d	99	77.273	ENSMICG00000007349	-	100	77.273	Microcebus_murinus
ENSMAUG00000001946	Polr1d	99	96.970	ENSMOCG00000021288	Polr1d	99	96.970	Microtus_ochrogaster
ENSMAUG00000001946	Polr1d	80	69.159	ENSMMOG00000009605	polr1d	94	69.159	Mola_mola
ENSMAUG00000001946	Polr1d	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSMAUG00000001946	Polr1d	80	66.355	ENSMALG00000010652	polr1d	94	66.355	Monopterus_albus
ENSMAUG00000001946	Polr1d	100	91.729	MGP_CAROLIEiJ_G0028034	Polr1d	100	91.729	Mus_caroli
ENSMAUG00000001946	Polr1d	100	91.729	ENSMUSG00000029642	Polr1d	100	91.729	Mus_musculus
ENSMAUG00000001946	Polr1d	100	90.977	MGP_PahariEiJ_G0024600	Polr1d	100	90.977	Mus_pahari
ENSMAUG00000001946	Polr1d	100	90.977	MGP_SPRETEiJ_G0029032	Polr1d	100	90.977	Mus_spretus
ENSMAUG00000001946	Polr1d	99	84.091	ENSMLUG00000004118	-	99	84.091	Myotis_lucifugus
ENSMAUG00000001946	Polr1d	100	94.737	ENSMLUG00000027169	-	100	94.737	Myotis_lucifugus
ENSMAUG00000001946	Polr1d	87	95.690	ENSNGAG00000006014	Polr1d	100	95.690	Nannospalax_galili
ENSMAUG00000001946	Polr1d	80	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSMAUG00000001946	Polr1d	100	96.241	ENSNLEG00000000358	POLR1D	100	96.241	Nomascus_leucogenys
ENSMAUG00000001946	Polr1d	100	92.481	ENSODEG00000005294	-	100	92.481	Octodon_degus
ENSMAUG00000001946	Polr1d	100	78.947	ENSODEG00000014801	-	100	78.947	Octodon_degus
ENSMAUG00000001946	Polr1d	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSMAUG00000001946	Polr1d	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSMAUG00000001946	Polr1d	80	69.159	ENSORLG00000010257	polr1d	94	69.159	Oryzias_latipes
ENSMAUG00000001946	Polr1d	83	67.568	ENSORLG00020000533	polr1d	75	67.568	Oryzias_latipes_hni
ENSMAUG00000001946	Polr1d	85	68.142	ENSORLG00015013267	polr1d	75	68.142	Oryzias_latipes_hsok
ENSMAUG00000001946	Polr1d	86	67.826	ENSOMEG00000014912	polr1d	77	67.826	Oryzias_melastigma
ENSMAUG00000001946	Polr1d	100	93.985	ENSOGAG00000014601	POLR1D	100	93.985	Otolemur_garnettii
ENSMAUG00000001946	Polr1d	94	94.400	ENSOARG00000017005	POLR1D	96	94.400	Ovis_aries
ENSMAUG00000001946	Polr1d	100	95.489	ENSPPAG00000028138	POLR1D	100	95.489	Pan_paniscus
ENSMAUG00000001946	Polr1d	99	94.697	ENSPPRG00000003381	POLR1D	99	94.697	Panthera_pardus
ENSMAUG00000001946	Polr1d	93	94.355	ENSPTIG00000018137	POLR1D	93	94.355	Panthera_tigris_altaica
ENSMAUG00000001946	Polr1d	100	96.241	ENSPTRG00000005734	POLR1D	100	96.241	Pan_troglodytes
ENSMAUG00000001946	Polr1d	100	84.962	ENSPANG00000035051	-	100	84.962	Papio_anubis
ENSMAUG00000001946	Polr1d	100	95.489	ENSPANG00000020259	-	100	95.489	Papio_anubis
ENSMAUG00000001946	Polr1d	86	63.478	ENSPKIG00000021891	polr1d	90	53.982	Paramormyrops_kingsleyae
ENSMAUG00000001946	Polr1d	87	73.504	ENSPSIG00000011822	POLR1D	91	73.504	Pelodiscus_sinensis
ENSMAUG00000001946	Polr1d	84	66.964	ENSPMGG00000010359	polr1d	97	66.964	Periophthalmus_magnuspinnatus
ENSMAUG00000001946	Polr1d	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSMAUG00000001946	Polr1d	100	93.985	ENSPEMG00000006336	-	100	93.985	Peromyscus_maniculatus_bairdii
ENSMAUG00000001946	Polr1d	81	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSMAUG00000001946	Polr1d	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSMAUG00000001946	Polr1d	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSMAUG00000001946	Polr1d	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSMAUG00000001946	Polr1d	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSMAUG00000001946	Polr1d	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSMAUG00000001946	Polr1d	100	93.985	ENSPCOG00000028175	POLR1D	100	93.985	Propithecus_coquereli
ENSMAUG00000001946	Polr1d	80	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSMAUG00000001946	Polr1d	76	69.307	ENSPNAG00000001512	polr1d	87	68.269	Pygocentrus_nattereri
ENSMAUG00000001946	Polr1d	100	91.729	ENSRBIG00000000336	-	100	91.729	Rhinopithecus_bieti
ENSMAUG00000001946	Polr1d	100	95.489	ENSRBIG00000036378	-	100	95.489	Rhinopithecus_bieti
ENSMAUG00000001946	Polr1d	100	92.481	ENSRROG00000026751	-	100	92.481	Rhinopithecus_roxellana
ENSMAUG00000001946	Polr1d	100	95.489	ENSRROG00000042232	-	100	95.489	Rhinopithecus_roxellana
ENSMAUG00000001946	Polr1d	89	47.059	YNL113W	RPC19	84	47.059	Saccharomyces_cerevisiae
ENSMAUG00000001946	Polr1d	86	89.474	ENSSBOG00000030146	-	84	89.474	Saimiri_boliviensis_boliviensis
ENSMAUG00000001946	Polr1d	100	95.489	ENSSBOG00000028482	-	100	95.489	Saimiri_boliviensis_boliviensis
ENSMAUG00000001946	Polr1d	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSMAUG00000001946	Polr1d	82	74.312	ENSSFOG00015011375	polr1d	96	74.312	Scleropages_formosus
ENSMAUG00000001946	Polr1d	80	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSMAUG00000001946	Polr1d	80	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSMAUG00000001946	Polr1d	86	62.609	ENSSLDG00000023871	polr1d	97	62.609	Seriola_lalandi_dorsalis
ENSMAUG00000001946	Polr1d	100	93.985	ENSSARG00000007840	POLR1D	100	93.985	Sorex_araneus
ENSMAUG00000001946	Polr1d	79	74.286	ENSSPUG00000005786	POLR1D	95	71.171	Sphenodon_punctatus
ENSMAUG00000001946	Polr1d	79	71.429	ENSSPAG00000011764	polr1d	92	71.429	Stegastes_partitus
ENSMAUG00000001946	Polr1d	100	91.729	ENSSSCG00000009310	POLR1D	100	91.729	Sus_scrofa
ENSMAUG00000001946	Polr1d	72	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSMAUG00000001946	Polr1d	78	66.346	ENSTRUG00000019741	polr1d	91	66.346	Takifugu_rubripes
ENSMAUG00000001946	Polr1d	93	92.742	ENSTBEG00000007006	POLR1D	100	92.742	Tupaia_belangeri
ENSMAUG00000001946	Polr1d	100	95.489	ENSUAMG00000011413	POLR1D	100	95.489	Ursus_americanus
ENSMAUG00000001946	Polr1d	93	95.161	ENSUMAG00000016968	POLR1D	97	95.161	Ursus_maritimus
ENSMAUG00000001946	Polr1d	100	95.489	ENSVVUG00000009216	POLR1D	100	95.489	Vulpes_vulpes
ENSMAUG00000001946	Polr1d	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSMAUG00000001946	Polr1d	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus