EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000004129 (Gene tree)
Gene ID: 101829420
Gene Symbol: Patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 19172 bases
Position: chrKB708142.1:21999075-22018246
Accession: 101829420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000003641	zf-C2H2	PF00096.26	1.9e-26	1	5
ENSMAUP00000003641	zf-C2H2	PF00096.26	1.9e-26	2	5
ENSMAUP00000003641	zf-C2H2	PF00096.26	1.9e-26	3	5
ENSMAUP00000003641	zf-C2H2	PF00096.26	1.9e-26	4	5
ENSMAUP00000003641	zf-C2H2	PF00096.26	1.9e-26	5	5
ENSMAUP00000003644	zf-C2H2	PF00096.26	2.5e-20	1	4
ENSMAUP00000003644	zf-C2H2	PF00096.26	2.5e-20	2	4
ENSMAUP00000003644	zf-C2H2	PF00096.26	2.5e-20	3	4
ENSMAUP00000003644	zf-C2H2	PF00096.26	2.5e-20	4	4
ENSMAUP00000003640	zf-C2H2	PF00096.26	1.3e-15	1	3
ENSMAUP00000003640	zf-C2H2	PF00096.26	1.3e-15	2	3
ENSMAUP00000003640	zf-C2H2	PF00096.26	1.3e-15	3	3
ENSMAUP00000003641	zf-met	PF12874.7	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000005162	-	2614	XM_005068902	ENSMAUP00000003640	537 (aa)	XP_005068959	A0A1U7QBR4
ENSMAUT00000005184	-	210	-	ENSMAUP00000003654	70 (aa)	-	-
ENSMAUT00000005171	-	3185	XM_005068900	ENSMAUP00000003644	641 (aa)	XP_005068957	A0A1U7QJL2
ENSMAUT00000005167	-	3323	XM_005068899	ENSMAUP00000003641	687 (aa)	XP_005068956	A0A1U7Q9R1
ENSMAUT00000005177	-	309	-	ENSMAUP00000003650	102 (aa)	-	UPI00001B63B0

Gene Model

Click here to download ENSMAUG00000004129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000004129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000004129	Patz1	68	40.385	ENSMAUG00000018651	Bcl6b	58	46.429
ENSMAUG00000004129	Patz1	67	33.478	ENSMAUG00000010647	Zfp882	84	34.328
ENSMAUG00000004129	Patz1	54	32.203	ENSMAUG00000007597	2610008E11Rik	65	38.462
ENSMAUG00000004129	Patz1	54	30.526	ENSMAUG00000008812	Zfp583	68	41.573
ENSMAUG00000004129	Patz1	60	30.290	ENSMAUG00000018252	Zfp574	59	31.579
ENSMAUG00000004129	Patz1	61	32.544	ENSMAUG00000005974	-	71	32.487
ENSMAUG00000004129	Patz1	58	36.283	ENSMAUG00000005776	Repin1	84	36.283
ENSMAUG00000004129	Patz1	54	31.863	ENSMAUG00000006768	Prdm5	81	40.909
ENSMAUG00000004129	Patz1	71	34.746	ENSMAUG00000001376	Zbtb17	78	38.710
ENSMAUG00000004129	Patz1	72	31.183	ENSMAUG00000000804	Zbtb6	95	32.979
ENSMAUG00000004129	Patz1	66	50.820	ENSMAUG00000014247	-	85	50.820
ENSMAUG00000004129	Patz1	53	32.500	ENSMAUG00000000939	-	74	32.500
ENSMAUG00000004129	Patz1	53	31.455	ENSMAUG00000009331	-	74	30.682
ENSMAUG00000004129	Patz1	54	37.500	ENSMAUG00000005691	-	72	44.286
ENSMAUG00000004129	Patz1	87	30.526	ENSMAUG00000019656	Gzf1	56	35.526
ENSMAUG00000004129	Patz1	64	31.250	ENSMAUG00000006878	Zfp319	79	31.250
ENSMAUG00000004129	Patz1	53	32.979	ENSMAUG00000007713	Zfp868	66	40.426
ENSMAUG00000004129	Patz1	70	31.013	ENSMAUG00000016908	Zbtb24	52	39.773
ENSMAUG00000004129	Patz1	61	32.051	ENSMAUG00000004844	-	67	33.617
ENSMAUG00000004129	Patz1	53	30.592	ENSMAUG00000001536	Zfp39	65	43.820
ENSMAUG00000004129	Patz1	84	37.895	ENSMAUG00000014139	Zbtb14	92	38.889
ENSMAUG00000004129	Patz1	91	30.496	ENSMAUG00000018740	Mynn	88	40.659
ENSMAUG00000004129	Patz1	64	30.159	ENSMAUG00000016437	-	97	39.506
ENSMAUG00000004129	Patz1	56	35.371	ENSMAUG00000000179	Zfp879	77	43.810
ENSMAUG00000004129	Patz1	58	35.294	ENSMAUG00000017074	Zfp26	84	41.489
ENSMAUG00000004129	Patz1	52	39.024	ENSMAUG00000003007	Zfp628	56	39.024
ENSMAUG00000004129	Patz1	55	32.997	ENSMAUG00000015263	-	61	41.935
ENSMAUG00000004129	Patz1	50	32.000	ENSMAUG00000001685	Snai3	62	32.222
ENSMAUG00000004129	Patz1	55	30.035	ENSMAUG00000000735	Zfp354a	74	33.500
ENSMAUG00000004129	Patz1	56	34.498	ENSMAUG00000009945	Zfp672	92	34.498
ENSMAUG00000004129	Patz1	68	31.690	ENSMAUG00000017968	Zfp651	51	37.778
ENSMAUG00000004129	Patz1	54	32.500	ENSMAUG00000005462	Zfat	63	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000004129	Patz1	100	98.981	ENSG00000100105	PATZ1	100	98.981	Homo_sapiens
ENSMAUG00000004129	Patz1	99	60.229	ENSAPOG00000018447	patz1	100	59.005	Acanthochromis_polyacanthus
ENSMAUG00000004129	Patz1	100	98.690	ENSAMEG00000007074	PATZ1	100	98.690	Ailuropoda_melanoleuca
ENSMAUG00000004129	Patz1	100	59.768	ENSACIG00000016779	patz1	100	59.768	Amphilophus_citrinellus
ENSMAUG00000004129	Patz1	100	57.563	ENSAPEG00000013354	patz1	100	57.563	Amphiprion_percula
ENSMAUG00000004129	Patz1	100	62.745	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSMAUG00000004129	Patz1	85	91.096	ENSAPLG00000003934	PATZ1	99	90.925	Anas_platyrhynchos
ENSMAUG00000004129	Patz1	100	98.981	ENSANAG00000029603	PATZ1	100	98.981	Aotus_nancymaae
ENSMAUG00000004129	Patz1	97	62.020	ENSAMXG00000002273	patz1	98	60.503	Astyanax_mexicanus
ENSMAUG00000004129	Patz1	100	98.752	ENSBTAG00000005478	PATZ1	100	98.752	Bos_taurus
ENSMAUG00000004129	Patz1	100	98.981	ENSCJAG00000010978	PATZ1	100	98.981	Callithrix_jacchus
ENSMAUG00000004129	Patz1	100	98.908	ENSCAFG00000013087	PATZ1	100	98.836	Canis_familiaris
ENSMAUG00000004129	Patz1	100	98.284	ENSCHIG00000020203	PATZ1	100	98.284	Capra_hircus
ENSMAUG00000004129	Patz1	100	98.752	ENSTSYG00000033183	PATZ1	100	98.752	Carlito_syrichta
ENSMAUG00000004129	Patz1	100	98.981	ENSCCAG00000028772	PATZ1	100	98.981	Cebus_capucinus
ENSMAUG00000004129	Patz1	100	98.981	ENSCATG00000006101	PATZ1	100	98.981	Cercocebus_atys
ENSMAUG00000004129	Patz1	100	88.696	ENSCPBG00000011277	PATZ1	100	88.696	Chrysemys_picta_bellii
ENSMAUG00000004129	Patz1	100	98.981	ENSCANG00000024972	PATZ1	100	98.981	Colobus_angolensis_palliatus
ENSMAUG00000004129	Patz1	100	97.962	ENSCGRG00001004071	Patz1	100	97.962	Cricetulus_griseus_chok1gshd
ENSMAUG00000004129	Patz1	93	98.756	ENSCGRG00000004814	Patz1	100	98.783	Cricetulus_griseus_crigri
ENSMAUG00000004129	Patz1	100	54.749	ENSCSEG00000001385	patz1	100	55.105	Cynoglossus_semilaevis
ENSMAUG00000004129	Patz1	100	58.407	ENSCVAG00000007684	patz1	100	59.232	Cyprinodon_variegatus
ENSMAUG00000004129	Patz1	97	60.679	ENSDARG00000076584	patz1	98	58.663	Danio_rerio
ENSMAUG00000004129	Patz1	90	98.546	ENSDNOG00000003183	PATZ1	100	98.546	Dasypus_novemcinctus
ENSMAUG00000004129	Patz1	100	98.908	ENSDORG00000023834	Patz1	100	98.908	Dipodomys_ordii
ENSMAUG00000004129	Patz1	100	98.752	ENSECAG00000025030	PATZ1	100	98.752	Equus_caballus
ENSMAUG00000004129	Patz1	99	61.437	ENSELUG00000002333	patz1	100	58.120	Esox_lucius
ENSMAUG00000004129	Patz1	100	98.908	ENSFCAG00000030253	PATZ1	100	98.908	Felis_catus
ENSMAUG00000004129	Patz1	86	91.356	ENSFALG00000007450	PATZ1	99	91.312	Ficedula_albicollis
ENSMAUG00000004129	Patz1	96	96.881	ENSFDAG00000005614	PATZ1	100	96.881	Fukomys_damarensis
ENSMAUG00000004129	Patz1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSMAUG00000004129	Patz1	98	54.979	ENSGMOG00000001062	patz1	98	54.571	Gadus_morhua
ENSMAUG00000004129	Patz1	100	88.201	ENSGALG00000006934	PATZ1	100	88.201	Gallus_gallus
ENSMAUG00000004129	Patz1	100	59.806	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSMAUG00000004129	Patz1	85	91.767	ENSGAGG00000003214	PATZ1	100	91.595	Gopherus_agassizii
ENSMAUG00000004129	Patz1	100	99.127	ENSGGOG00000017171	PATZ1	100	99.127	Gorilla_gorilla
ENSMAUG00000004129	Patz1	98	62.648	ENSHCOG00000017644	patz1	98	61.191	Hippocampus_comes
ENSMAUG00000004129	Patz1	97	60.081	ENSIPUG00000017653	patz1	97	53.792	Ictalurus_punctatus
ENSMAUG00000004129	Patz1	100	98.690	ENSSTOG00000020707	PATZ1	100	98.690	Ictidomys_tridecemlineatus
ENSMAUG00000004129	Patz1	100	97.097	ENSJJAG00000015259	Patz1	100	97.097	Jaculus_jaculus
ENSMAUG00000004129	Patz1	100	57.632	ENSKMAG00000008157	patz1	100	57.730	Kryptolebias_marmoratus
ENSMAUG00000004129	Patz1	100	98.108	ENSLAFG00000002317	PATZ1	100	98.108	Loxodonta_africana
ENSMAUG00000004129	Patz1	100	98.836	ENSMFAG00000040968	PATZ1	100	98.836	Macaca_fascicularis
ENSMAUG00000004129	Patz1	100	98.836	ENSMNEG00000037588	PATZ1	100	98.836	Macaca_nemestrina
ENSMAUG00000004129	Patz1	100	98.981	ENSMLEG00000030938	PATZ1	100	98.981	Mandrillus_leucophaeus
ENSMAUG00000004129	Patz1	100	57.625	ENSMAMG00000023652	patz1	100	57.918	Mastacembelus_armatus
ENSMAUG00000004129	Patz1	85	87.521	ENSMGAG00000008439	PATZ1	100	87.350	Meleagris_gallopavo
ENSMAUG00000004129	Patz1	100	98.752	ENSMICG00000005430	PATZ1	100	98.752	Microcebus_murinus
ENSMAUG00000004129	Patz1	100	99.272	ENSMOCG00000014488	Patz1	100	99.272	Microtus_ochrogaster
ENSMAUG00000004129	Patz1	99	55.469	ENSMMOG00000021679	patz1	100	55.273	Mola_mola
ENSMAUG00000004129	Patz1	100	56.860	ENSMALG00000021172	patz1	100	56.860	Monopterus_albus
ENSMAUG00000004129	Patz1	100	98.981	MGP_CAROLIEiJ_G0016007	Patz1	100	98.981	Mus_caroli
ENSMAUG00000004129	Patz1	100	99.127	ENSMUSG00000020453	Patz1	100	99.127	Mus_musculus
ENSMAUG00000004129	Patz1	100	99.127	MGP_PahariEiJ_G0016884	Patz1	100	99.127	Mus_pahari
ENSMAUG00000004129	Patz1	100	99.127	MGP_SPRETEiJ_G0016846	Patz1	100	99.127	Mus_spretus
ENSMAUG00000004129	Patz1	100	98.596	ENSMLUG00000009942	PATZ1	100	98.596	Myotis_lucifugus
ENSMAUG00000004129	Patz1	100	99.418	ENSNGAG00000010268	Patz1	100	99.418	Nannospalax_galili
ENSMAUG00000004129	Patz1	100	59.574	ENSNBRG00000016032	patz1	100	59.574	Neolamprologus_brichardi
ENSMAUG00000004129	Patz1	68	93.763	ENSMEUG00000016293	PATZ1	100	93.763	Notamacropus_eugenii
ENSMAUG00000004129	Patz1	100	98.128	ENSODEG00000003589	PATZ1	100	98.128	Octodon_degus
ENSMAUG00000004129	Patz1	100	58.272	ENSONIG00000004248	patz1	100	58.419	Oreochromis_niloticus
ENSMAUG00000004129	Patz1	100	93.033	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSMAUG00000004129	Patz1	100	58.626	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSMAUG00000004129	Patz1	100	58.003	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSMAUG00000004129	Patz1	100	57.459	ENSOMEG00000006636	patz1	100	57.459	Oryzias_melastigma
ENSMAUG00000004129	Patz1	100	98.544	ENSOGAG00000027905	PATZ1	100	98.544	Otolemur_garnettii
ENSMAUG00000004129	Patz1	100	99.127	ENSPPAG00000033227	PATZ1	100	99.127	Pan_paniscus
ENSMAUG00000004129	Patz1	100	98.908	ENSPPRG00000001573	PATZ1	100	98.908	Panthera_pardus
ENSMAUG00000004129	Patz1	86	98.651	ENSPTIG00000007937	PATZ1	91	98.651	Panthera_tigris_altaica
ENSMAUG00000004129	Patz1	100	99.127	ENSPTRG00000014268	PATZ1	100	99.127	Pan_troglodytes
ENSMAUG00000004129	Patz1	100	98.981	ENSPANG00000006821	PATZ1	100	98.981	Papio_anubis
ENSMAUG00000004129	Patz1	100	62.127	ENSPKIG00000019584	patz1	100	61.567	Paramormyrops_kingsleyae
ENSMAUG00000004129	Patz1	58	95.455	ENSPSIG00000011562	-	100	96.000	Pelodiscus_sinensis
ENSMAUG00000004129	Patz1	60	83.051	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSMAUG00000004129	Patz1	100	57.022	ENSPMGG00000010196	patz1	100	57.303	Periophthalmus_magnuspinnatus
ENSMAUG00000004129	Patz1	100	99.376	ENSPEMG00000005321	Patz1	100	99.376	Peromyscus_maniculatus_bairdii
ENSMAUG00000004129	Patz1	100	57.980	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSMAUG00000004129	Patz1	100	58.065	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSMAUG00000004129	Patz1	100	57.517	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSMAUG00000004129	Patz1	100	98.836	ENSPPYG00000011732	PATZ1	100	98.836	Pongo_abelii
ENSMAUG00000004129	Patz1	100	98.596	ENSPCOG00000019729	PATZ1	100	98.596	Propithecus_coquereli
ENSMAUG00000004129	Patz1	100	98.690	ENSPVAG00000001749	PATZ1	100	98.690	Pteropus_vampyrus
ENSMAUG00000004129	Patz1	100	58.766	ENSPNYG00000013542	patz1	100	58.766	Pundamilia_nyererei
ENSMAUG00000004129	Patz1	84	60.292	ENSPNAG00000017222	patz1	99	59.325	Pygocentrus_nattereri
ENSMAUG00000004129	Patz1	100	98.981	ENSRBIG00000044231	PATZ1	100	98.981	Rhinopithecus_bieti
ENSMAUG00000004129	Patz1	100	98.981	ENSRROG00000037155	PATZ1	100	98.981	Rhinopithecus_roxellana
ENSMAUG00000004129	Patz1	100	98.981	ENSSBOG00000003894	PATZ1	100	98.981	Saimiri_boliviensis_boliviensis
ENSMAUG00000004129	Patz1	85	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSMAUG00000004129	Patz1	100	86.629	ENSSPUG00000015298	PATZ1	100	86.344	Sphenodon_punctatus
ENSMAUG00000004129	Patz1	85	98.454	ENSSSCG00000010027	PATZ1	100	98.507	Sus_scrofa
ENSMAUG00000004129	Patz1	100	57.931	ENSTRUG00000015366	patz1	100	58.207	Takifugu_rubripes
ENSMAUG00000004129	Patz1	100	98.690	ENSTTRG00000010279	PATZ1	100	98.690	Tursiops_truncatus
ENSMAUG00000004129	Patz1	100	98.908	ENSUAMG00000015014	PATZ1	100	98.908	Ursus_americanus
ENSMAUG00000004129	Patz1	100	73.043	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSMAUG00000004129	Patz1	100	58.590	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus