EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000004820 (Gene tree)
Gene ID: 101823745
Gene Symbol: -
Alias: -
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 83512 bases
Position: chrKB708209.1:8665244-8748755
Accession: 101823745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000004034	ResIII	PF04851.15	7.6e-11	1	1
ENSMAUP00000004041	ResIII	PF04851.15	1.5e-10	1	1
ENSMAUP00000004041	DEAD	PF00270.29	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000005999	-	4554	XM_005078437	ENSMAUP00000004041	1517 (aa)	XP_005078494	-
ENSMAUT00000005985	-	7261	XM_013119334	ENSMAUP00000004034	833 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000004820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000004820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000004820	-	66	30.195	ENSMAUG00000013586	Rad54b	61	31.156

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000004820	-	66	92.196	ENSG00000182150	ERCC6L2	100	95.122	Homo_sapiens
ENSMAUG00000004820	-	56	89.293	ENSAMEG00000011657	ERCC6L2	98	88.020	Ailuropoda_melanoleuca
ENSMAUG00000004820	-	79	61.829	ENSATEG00000016700	ercc6l2	68	61.829	Anabas_testudineus
ENSMAUG00000004820	-	66	79.636	ENSAPLG00000006105	ERCC6L2	98	76.281	Anas_platyrhynchos
ENSMAUG00000004820	-	66	80.000	ENSACAG00000012947	ERCC6L2	99	76.462	Anolis_carolinensis
ENSMAUG00000004820	-	89	55.046	ENSACLG00000015088	ercc6l2	95	52.809	Astatotilapia_calliptera
ENSMAUG00000004820	-	66	91.818	ENSCJAG00000008862	ERCC6L2	96	90.323	Callithrix_jacchus
ENSMAUG00000004820	-	97	78.114	ENSCAFG00000001219	ERCC6L2	99	77.486	Canis_familiaris
ENSMAUG00000004820	-	66	90.545	ENSTSYG00000013871	ERCC6L2	98	88.555	Carlito_syrichta
ENSMAUG00000004820	-	51	80.328	ENSCAPG00000009212	ERCC6L2	100	80.328	Cavia_aperea
ENSMAUG00000004820	-	100	76.123	ENSCPOG00000004544	-	90	87.383	Cavia_porcellus
ENSMAUG00000004820	-	66	92.559	ENSCCAG00000026980	ERCC6L2	96	90.102	Cebus_capucinus
ENSMAUG00000004820	-	60	82.271	ENSCHOG00000006282	ERCC6L2	98	76.293	Choloepus_hoffmanni
ENSMAUG00000004820	-	99	64.486	ENSCPBG00000005414	ERCC6L2	99	55.769	Chrysemys_picta_bellii
ENSMAUG00000004820	-	66	91.107	ENSCANG00000039934	ERCC6L2	96	88.937	Colobus_angolensis_palliatus
ENSMAUG00000004820	-	66	97.636	ENSCGRG00001022738	Ercc6l2	99	95.683	Cricetulus_griseus_chok1gshd
ENSMAUG00000004820	-	99	93.389	ENSCGRG00000015854	Ercc6l2	99	93.389	Cricetulus_griseus_crigri
ENSMAUG00000004820	-	80	60.588	ENSDARG00000012403	ercc6l2	90	59.973	Danio_rerio
ENSMAUG00000004820	-	51	88.759	ENSDORG00000010788	Ercc6l2	93	88.759	Dipodomys_ordii
ENSMAUG00000004820	-	66	87.296	ENSETEG00000010686	ERCC6L2	96	84.234	Echinops_telfairi
ENSMAUG00000004820	-	60	73.506	ENSEEUG00000009341	ERCC6L2	97	70.888	Erinaceus_europaeus
ENSMAUG00000004820	-	77	61.644	ENSELUG00000002272	ercc6l2	93	51.735	Esox_lucius
ENSMAUG00000004820	-	77	74.264	ENSFALG00000003400	ERCC6L2	91	68.478	Ficedula_albicollis
ENSMAUG00000004820	-	66	89.292	ENSFDAG00000000805	ERCC6L2	99	87.500	Fukomys_damarensis
ENSMAUG00000004820	-	83	57.531	ENSFHEG00000017890	ercc6l2	74	57.531	Fundulus_heteroclitus
ENSMAUG00000004820	-	77	61.325	ENSGMOG00000007751	ercc6l2	92	57.819	Gadus_morhua
ENSMAUG00000004820	-	99	63.306	ENSGALG00000012621	ERCC6L2	99	52.098	Gallus_gallus
ENSMAUG00000004820	-	82	59.123	ENSGAFG00000012386	ercc6l2	62	56.057	Gambusia_affinis
ENSMAUG00000004820	-	82	58.655	ENSGACG00000006992	ercc6l2	84	58.924	Gasterosteus_aculeatus
ENSMAUG00000004820	-	99	64.061	ENSGAGG00000021675	ERCC6L2	99	55.363	Gopherus_agassizii
ENSMAUG00000004820	-	66	92.015	ENSGGOG00000002705	ERCC6L2	96	89.520	Gorilla_gorilla
ENSMAUG00000004820	-	50	94.318	ENSHGLG00000009488	ERCC6L2	96	90.909	Heterocephalus_glaber_female
ENSMAUG00000004820	-	88	66.930	ENSIPUG00000000283	ercc6l2	89	60.349	Ictalurus_punctatus
ENSMAUG00000004820	-	66	89.474	ENSJJAG00000018150	Ercc6l2	98	88.759	Jaculus_jaculus
ENSMAUG00000004820	-	79	60.322	ENSLBEG00000003016	ercc6l2	71	56.815	Labrus_bergylta
ENSMAUG00000004820	-	99	60.855	ENSLACG00000011767	ERCC6L2	99	51.615	Latimeria_chalumnae
ENSMAUG00000004820	-	81	65.140	ENSLOCG00000009238	ercc6l2	54	62.639	Lepisosteus_oculatus
ENSMAUG00000004820	-	66	87.500	ENSLAFG00000013092	ERCC6L2	98	87.609	Loxodonta_africana
ENSMAUG00000004820	-	66	90.744	ENSMNEG00000035630	ERCC6L2	96	88.646	Macaca_nemestrina
ENSMAUG00000004820	-	66	91.470	ENSMLEG00000019530	ERCC6L2	96	89.083	Mandrillus_leucophaeus
ENSMAUG00000004820	-	66	92.922	ENSMICG00000029160	ERCC6L2	96	91.801	Microcebus_murinus
ENSMAUG00000004820	-	100	91.507	ENSMOCG00000019362	-	99	91.507	Microtus_ochrogaster
ENSMAUG00000004820	-	77	59.754	ENSMMOG00000001419	ercc6l2	79	54.191	Mola_mola
ENSMAUG00000004820	-	82	59.169	ENSMALG00000016933	ercc6l2	82	59.467	Monopterus_albus
ENSMAUG00000004820	-	100	88.636	MGP_CAROLIEiJ_G0018635	-	99	93.997	Mus_caroli
ENSMAUG00000004820	-	66	94.909	ENSMUSG00000021470	Ercc6l2	98	94.006	Mus_musculus
ENSMAUG00000004820	-	100	89.354	MGP_PahariEiJ_G0019699	-	99	94.876	Mus_pahari
ENSMAUG00000004820	-	100	88.636	MGP_SPRETEiJ_G0019515	-	99	94.143	Mus_spretus
ENSMAUG00000004820	-	86	80.985	ENSMPUG00000006738	ERCC6L2	99	79.951	Mustela_putorius_furo
ENSMAUG00000004820	-	66	87.319	ENSMLUG00000000845	ERCC6L2	96	86.988	Myotis_lucifugus
ENSMAUG00000004820	-	100	82.458	ENSNGAG00000016174	Ercc6l2	99	89.270	Nannospalax_galili
ENSMAUG00000004820	-	66	91.833	ENSNLEG00000016784	ERCC6L2	96	89.665	Nomascus_leucogenys
ENSMAUG00000004820	-	66	90.018	ENSOPRG00000011647	ERCC6L2	99	88.728	Ochotona_princeps
ENSMAUG00000004820	-	66	90.000	ENSODEG00000016588	ERCC6L2	98	88.084	Octodon_degus
ENSMAUG00000004820	-	66	67.151	ENSONIG00000015139	ercc6l2	99	61.048	Oreochromis_niloticus
ENSMAUG00000004820	-	100	77.358	ENSOCUG00000000442	-	98	90.087	Oryctolagus_cuniculus
ENSMAUG00000004820	-	82	61.613	ENSORLG00000004287	ercc6l2	86	60.676	Oryzias_latipes
ENSMAUG00000004820	-	77	61.912	ENSORLG00020002133	ercc6l2	86	60.834	Oryzias_latipes_hni
ENSMAUG00000004820	-	77	62.364	ENSORLG00015010250	ercc6l2	76	61.241	Oryzias_latipes_hsok
ENSMAUG00000004820	-	79	60.588	ENSOMEG00000021983	ercc6l2	84	60.459	Oryzias_melastigma
ENSMAUG00000004820	-	95	84.352	ENSOGAG00000003146	ERCC6L2	98	85.089	Otolemur_garnettii
ENSMAUG00000004820	-	100	77.962	ENSOARG00000008546	ERCC6L2	99	78.586	Ovis_aries
ENSMAUG00000004820	-	66	92.377	ENSPPAG00000035061	ERCC6L2	96	89.956	Pan_paniscus
ENSMAUG00000004820	-	66	90.545	ENSPPRG00000019238	ERCC6L2	96	88.630	Panthera_pardus
ENSMAUG00000004820	-	66	90.364	ENSPTIG00000009148	ERCC6L2	98	87.124	Panthera_tigris_altaica
ENSMAUG00000004820	-	66	92.196	ENSPTRG00000048689	ERCC6L2	96	89.811	Pan_troglodytes
ENSMAUG00000004820	-	70	64.576	ENSPKIG00000016799	ercc6l2	85	58.807	Paramormyrops_kingsleyae
ENSMAUG00000004820	-	66	84.000	ENSPSIG00000010627	ERCC6L2	99	79.532	Pelodiscus_sinensis
ENSMAUG00000004820	-	75	59.968	ENSPMGG00000016547	ercc6l2	92	59.968	Periophthalmus_magnuspinnatus
ENSMAUG00000004820	-	100	90.920	ENSPEMG00000006631	-	99	91.018	Peromyscus_maniculatus_bairdii
ENSMAUG00000004820	-	100	69.366	ENSPCIG00000020095	-	97	66.036	Phascolarctos_cinereus
ENSMAUG00000004820	-	79	61.290	ENSPFOG00000019333	ercc6l2	73	57.650	Poecilia_formosa
ENSMAUG00000004820	-	79	60.704	ENSPREG00000016702	ercc6l2	74	55.938	Poecilia_reticulata
ENSMAUG00000004820	-	100	78.799	ENSPPYG00000019412	-	99	67.624	Pongo_abelii
ENSMAUG00000004820	-	60	93.042	ENSPCOG00000026714	ERCC6L2	96	86.550	Propithecus_coquereli
ENSMAUG00000004820	-	65	88.807	ENSPVAG00000003926	ERCC6L2	96	80.058	Pteropus_vampyrus
ENSMAUG00000004820	-	89	54.915	ENSPNYG00000015347	ercc6l2	92	52.703	Pundamilia_nyererei
ENSMAUG00000004820	-	69	67.458	ENSPNAG00000011413	ercc6l2	89	60.634	Pygocentrus_nattereri
ENSMAUG00000004820	-	100	87.679	ENSRNOG00000019175	Ercc6l2	99	83.388	Rattus_norvegicus
ENSMAUG00000004820	-	66	87.091	ENSRBIG00000018434	ERCC6L2	96	85.423	Rhinopithecus_bieti
ENSMAUG00000004820	-	66	91.107	ENSRROG00000029000	ERCC6L2	96	88.937	Rhinopithecus_roxellana
ENSMAUG00000004820	-	75	62.282	ENSSFOG00015006394	ercc6l2	84	60.431	Scleropages_formosus
ENSMAUG00000004820	-	77	61.805	ENSSLDG00000018663	ercc6l2	79	58.421	Seriola_lalandi_dorsalis
ENSMAUG00000004820	-	100	62.782	ENSSPUG00000004336	ERCC6L2	98	57.523	Sphenodon_punctatus
ENSMAUG00000004820	-	79	58.457	ENSSPAG00000004484	ercc6l2	79	54.890	Stegastes_partitus
ENSMAUG00000004820	-	66	80.545	ENSTGUG00000000524	ERCC6L2	100	76.170	Taeniopygia_guttata
ENSMAUG00000004820	-	83	57.532	ENSTRUG00000014634	ercc6l2	83	68.889	Takifugu_rubripes
ENSMAUG00000004820	-	52	94.118	ENSTBEG00000014213	ERCC6L2	87	94.118	Tupaia_belangeri
ENSMAUG00000004820	-	66	83.303	ENSTTRG00000005372	ERCC6L2	98	82.640	Tursiops_truncatus
ENSMAUG00000004820	-	60	91.000	ENSVPAG00000004701	ERCC6L2	99	89.399	Vicugna_pacos
ENSMAUG00000004820	-	79	68.778	ENSXETG00000014835	ercc6l2	95	62.514	Xenopus_tropicalis
ENSMAUG00000004820	-	82	59.149	ENSXMAG00000023695	ercc6l2	74	55.952	Xiphophorus_maculatus