EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000004834 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 37018 bases
Position: chrKB708228.1:4598902-4635919
Accession: 101835613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000004058	ResIII	PF04851.15	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000006038	-	1986	-	ENSMAUP00000004058	662 (aa)	-	-
ENSMAUT00000006022	-	4236	XM_013120893	ENSMAUP00000004050	91 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000004834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000004834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000004834	-	100	92.561	ENSG00000139697	SBNO1	50	92.561	Homo_sapiens
ENSMAUG00000004834	-	100	92.735	ENSAMEG00000015151	SBNO1	50	92.735	Ailuropoda_melanoleuca
ENSMAUG00000004834	-	99	73.876	ENSATEG00000006667	sbno1	50	73.455	Anabas_testudineus
ENSMAUG00000004834	-	100	88.252	ENSAPLG00000015674	SBNO1	50	87.822	Anas_platyrhynchos
ENSMAUG00000004834	-	100	96.833	ENSANAG00000029958	-	52	97.277	Aotus_nancymaae
ENSMAUG00000004834	-	100	98.193	ENSBTAG00000020505	SBNO1	50	93.276	Bos_taurus
ENSMAUG00000004834	-	100	96.833	ENSCJAG00000016599	SBNO1	89	96.833	Callithrix_jacchus
ENSMAUG00000004834	-	100	93.419	ENSCAFG00000007503	SBNO1	51	93.419	Canis_familiaris
ENSMAUG00000004834	-	99	98.336	ENSCAFG00020015363	SBNO1	52	98.336	Canis_lupus_dingo
ENSMAUG00000004834	-	99	98.033	ENSCHIG00000008382	SBNO1	52	98.033	Capra_hircus
ENSMAUG00000004834	-	100	98.039	ENSTSYG00000012749	SBNO1	54	98.185	Carlito_syrichta
ENSMAUG00000004834	-	95	97.138	ENSCAPG00000000384	SBNO1	50	98.217	Cavia_aperea
ENSMAUG00000004834	-	99	97.273	ENSCPOG00000008109	SBNO1	52	97.273	Cavia_porcellus
ENSMAUG00000004834	-	100	96.983	ENSCCAG00000035316	SBNO1	54	97.428	Cebus_capucinus
ENSMAUG00000004834	-	96	96.378	ENSCATG00000008239	SBNO1	50	96.203	Cercocebus_atys
ENSMAUG00000004834	-	99	97.424	ENSCLAG00000008995	SBNO1	52	97.424	Chinchilla_lanigera
ENSMAUG00000004834	-	100	88.395	ENSCHOG00000008814	SBNO1	50	87.822	Choloepus_hoffmanni
ENSMAUG00000004834	-	100	92.308	ENSCPBG00000025968	SBNO1	52	87.787	Chrysemys_picta_bellii
ENSMAUG00000004834	-	99	93.675	ENSCANG00000042688	-	53	93.072	Colobus_angolensis_palliatus
ENSMAUG00000004834	-	99	99.848	ENSCGRG00001017470	Sbno1	52	99.848	Cricetulus_griseus_chok1gshd
ENSMAUG00000004834	-	99	99.848	ENSCGRG00000004756	Sbno1	52	99.848	Cricetulus_griseus_crigri
ENSMAUG00000004834	-	99	77.185	ENSCVAG00000007038	sbno1	51	72.727	Cyprinodon_variegatus
ENSMAUG00000004834	-	100	92.837	ENSDNOG00000017147	SBNO1	64	97.456	Dasypus_novemcinctus
ENSMAUG00000004834	-	99	83.333	ENSETEG00000005620	SBNO1	50	82.902	Echinops_telfairi
ENSMAUG00000004834	-	97	68.259	ENSEBUG00000013823	sbno1	59	67.334	Eptatretus_burgeri
ENSMAUG00000004834	-	100	98.494	ENSEASG00005012595	-	90	98.494	Equus_asinus_asinus
ENSMAUG00000004834	-	100	93.562	ENSECAG00000006127	SBNO1	50	93.562	Equus_caballus
ENSMAUG00000004834	-	98	75.931	ENSELUG00000002886	sbno1	50	75.823	Esox_lucius
ENSMAUG00000004834	-	100	93.562	ENSFCAG00000015331	SBNO1	50	93.562	Felis_catus
ENSMAUG00000004834	-	100	87.822	ENSFALG00000009273	SBNO1	50	87.393	Ficedula_albicollis
ENSMAUG00000004834	-	99	97.273	ENSFDAG00000014232	SBNO1	52	97.273	Fukomys_damarensis
ENSMAUG00000004834	-	99	75.516	ENSFHEG00000007360	sbno1	51	72.676	Fundulus_heteroclitus
ENSMAUG00000004834	-	100	88.522	ENSGALG00000003392	SBNO1	56	87.931	Gallus_gallus
ENSMAUG00000004834	-	98	78.030	ENSGAFG00000003960	sbno1	50	73.684	Gambusia_affinis
ENSMAUG00000004834	-	100	90.196	ENSGAGG00000001065	SBNO1	56	85.776	Gopherus_agassizii
ENSMAUG00000004834	-	100	96.833	ENSGGOG00000015000	SBNO1	52	96.818	Gorilla_gorilla
ENSMAUG00000004834	-	99	76.248	ENSHBUG00000011910	sbno1	50	76.097	Haplochromis_burtoni
ENSMAUG00000004834	-	99	93.030	ENSHGLG00000014165	-	51	92.576	Heterocephalus_glaber_female
ENSMAUG00000004834	-	99	75.789	ENSHCOG00000003246	sbno1	51	76.320	Hippocampus_comes
ENSMAUG00000004834	-	98	76.879	ENSIPUG00000015830	Sbno1	56	76.327	Ictalurus_punctatus
ENSMAUG00000004834	-	100	97.888	ENSSTOG00000023221	SBNO1	52	97.879	Ictidomys_tridecemlineatus
ENSMAUG00000004834	-	99	98.039	ENSJJAG00000001741	Sbno1	53	98.039	Jaculus_jaculus
ENSMAUG00000004834	-	99	75.893	ENSKMAG00000009696	sbno1	51	72.472	Kryptolebias_marmoratus
ENSMAUG00000004834	-	99	73.324	ENSLBEG00000007623	sbno1	51	73.045	Labrus_bergylta
ENSMAUG00000004834	-	100	82.783	ENSLACG00000017227	SBNO1	56	82.066	Latimeria_chalumnae
ENSMAUG00000004834	-	100	92.418	ENSLAFG00000002135	SBNO1	50	92.418	Loxodonta_africana
ENSMAUG00000004834	-	100	96.833	ENSMFAG00000031429	SBNO1	57	92.418	Macaca_fascicularis
ENSMAUG00000004834	-	100	96.833	ENSMMUG00000011496	SBNO1	52	97.277	Macaca_mulatta
ENSMAUG00000004834	-	100	93.213	ENSMLEG00000033260	SBNO1	52	92.890	Mandrillus_leucophaeus
ENSMAUG00000004834	-	99	73.593	ENSMAMG00000005473	sbno1	50	73.593	Mastacembelus_armatus
ENSMAUG00000004834	-	100	88.522	ENSMGAG00000003274	SBNO1	56	87.931	Meleagris_gallopavo
ENSMAUG00000004834	-	100	97.888	ENSMICG00000006573	-	87	97.888	Microcebus_murinus
ENSMAUG00000004834	-	99	99.545	ENSMOCG00000009390	Sbno1	52	99.545	Microtus_ochrogaster
ENSMAUG00000004834	-	100	90.272	ENSMODG00000012470	SBNO1	50	89.700	Monodelphis_domestica
ENSMAUG00000004834	-	99	74.888	ENSMALG00000001056	sbno1	50	73.249	Monopterus_albus
ENSMAUG00000004834	-	100	99.397	MGP_CAROLIEiJ_G0027749	Sbno1	100	99.397	Mus_caroli
ENSMAUG00000004834	-	100	99.548	ENSMUSG00000038095	Sbno1	100	99.548	Mus_musculus
ENSMAUG00000004834	-	100	99.397	MGP_PahariEiJ_G0024329	Sbno1	100	99.397	Mus_pahari
ENSMAUG00000004834	-	100	99.548	MGP_SPRETEiJ_G0028747	Sbno1	100	99.548	Mus_spretus
ENSMAUG00000004834	-	100	93.705	ENSMPUG00000001658	SBNO1	50	93.705	Mustela_putorius_furo
ENSMAUG00000004834	-	100	92.847	ENSMLUG00000017159	SBNO1	50	92.847	Myotis_lucifugus
ENSMAUG00000004834	-	99	98.941	ENSNGAG00000012620	Sbno1	53	98.941	Nannospalax_galili
ENSMAUG00000004834	-	100	97.134	ENSNLEG00000001502	SBNO1	54	97.579	Nomascus_leucogenys
ENSMAUG00000004834	-	100	79.083	ENSMEUG00000008768	-	75	78.510	Notamacropus_eugenii
ENSMAUG00000004834	-	100	90.544	ENSOPRG00000011054	SBNO1	50	89.971	Ochotona_princeps
ENSMAUG00000004834	-	99	97.424	ENSODEG00000009997	SBNO1	52	97.424	Octodon_degus
ENSMAUG00000004834	-	99	73.007	ENSONIG00000015348	sbno1	51	73.045	Oreochromis_niloticus
ENSMAUG00000004834	-	99	73.352	ENSORLG00000001593	sbno1	52	73.249	Oryzias_latipes
ENSMAUG00000004834	-	99	73.109	ENSORLG00020015216	sbno1	51	72.969	Oryzias_latipes_hni
ENSMAUG00000004834	-	99	73.287	ENSORLG00015002726	sbno1	50	73.184	Oryzias_latipes_hsok
ENSMAUG00000004834	-	99	74.085	ENSOMEG00000019313	sbno1	50	73.625	Oryzias_melastigma
ENSMAUG00000004834	-	100	93.524	ENSOGAG00000010781	-	100	93.825	Otolemur_garnettii
ENSMAUG00000004834	-	100	92.857	ENSOARG00000004404	SBNO1	50	92.857	Ovis_aries
ENSMAUG00000004834	-	100	96.983	ENSPPAG00000024635	SBNO1	52	97.428	Pan_paniscus
ENSMAUG00000004834	-	100	93.562	ENSPPRG00000022092	SBNO1	50	93.562	Panthera_pardus
ENSMAUG00000004834	-	100	93.678	ENSPTIG00000017803	SBNO1	50	93.678	Panthera_tigris_altaica
ENSMAUG00000004834	-	100	96.983	ENSPTRG00000005597	SBNO1	52	97.428	Pan_troglodytes
ENSMAUG00000004834	-	100	96.833	ENSPANG00000011640	SBNO1	57	92.407	Papio_anubis
ENSMAUG00000004834	-	99	77.253	ENSPKIG00000001441	sbno1	50	77.730	Paramormyrops_kingsleyae
ENSMAUG00000004834	-	100	92.157	ENSPSIG00000009572	-	50	87.644	Pelodiscus_sinensis
ENSMAUG00000004834	-	100	84.935	ENSPSIG00000009256	-	54	84.505	Pelodiscus_sinensis
ENSMAUG00000004834	-	69	82.983	ENSPMGG00000017196	sbno1	84	82.983	Periophthalmus_magnuspinnatus
ENSMAUG00000004834	-	99	99.242	ENSPEMG00000016087	Sbno1	52	99.242	Peromyscus_maniculatus_bairdii
ENSMAUG00000004834	-	65	59.459	ENSPMAG00000007246	-	100	60.465	Petromyzon_marinus
ENSMAUG00000004834	-	100	94.286	ENSPCIG00000010985	SBNO1	50	89.429	Phascolarctos_cinereus
ENSMAUG00000004834	-	98	74.786	ENSPFOG00000005069	sbno1	50	74.253	Poecilia_formosa
ENSMAUG00000004834	-	98	74.395	ENSPLAG00000015015	sbno1	50	74.290	Poecilia_latipinna
ENSMAUG00000004834	-	98	74.822	ENSPMEG00000021212	sbno1	50	74.574	Poecilia_mexicana
ENSMAUG00000004834	-	82	90.487	ENSPREG00000017746	sbno1	50	74.148	Poecilia_reticulata
ENSMAUG00000004834	-	100	92.120	ENSPPYG00000005084	SBNO1	50	92.120	Pongo_abelii
ENSMAUG00000004834	-	100	87.536	ENSPCAG00000008634	SBNO1	50	87.393	Procavia_capensis
ENSMAUG00000004834	-	100	97.738	ENSPCOG00000024277	SBNO1	52	98.033	Propithecus_coquereli
ENSMAUG00000004834	-	100	88.395	ENSPVAG00000015304	SBNO1	50	87.679	Pteropus_vampyrus
ENSMAUG00000004834	-	99	74.052	ENSPNYG00000004291	sbno1	51	73.249	Pundamilia_nyererei
ENSMAUG00000004834	-	98	76.633	ENSPNAG00000015622	sbno1	50	73.611	Pygocentrus_nattereri
ENSMAUG00000004834	-	99	99.091	ENSRNOG00000001064	Sbno1	52	99.091	Rattus_norvegicus
ENSMAUG00000004834	-	100	96.983	ENSRROG00000034230	SBNO1	52	97.428	Rhinopithecus_roxellana
ENSMAUG00000004834	-	99	81.750	ENSSFOG00015019025	sbno1	50	77.905	Scleropages_formosus
ENSMAUG00000004834	-	99	73.803	ENSSMAG00000013640	sbno1	50	73.521	Scophthalmus_maximus
ENSMAUG00000004834	-	98	74.037	ENSSDUG00000023480	sbno1	50	73.894	Seriola_dumerili
ENSMAUG00000004834	-	98	74.037	ENSSLDG00000007928	sbno1	50	73.894	Seriola_lalandi_dorsalis
ENSMAUG00000004834	-	99	73.343	ENSSPAG00000016244	sbno1	50	73.487	Stegastes_partitus
ENSMAUG00000004834	-	100	98.193	ENSSSCG00000009776	SBNO1	51	93.266	Sus_scrofa
ENSMAUG00000004834	-	100	87.393	ENSTGUG00000005380	SBNO1	50	86.963	Taeniopygia_guttata
ENSMAUG00000004834	-	99	76.727	ENSTRUG00000018490	sbno1	51	72.486	Takifugu_rubripes
ENSMAUG00000004834	-	99	72.535	ENSTNIG00000013506	sbno1	88	72.394	Tetraodon_nigroviridis
ENSMAUG00000004834	-	100	93.562	ENSUAMG00000019671	SBNO1	50	93.562	Ursus_americanus
ENSMAUG00000004834	-	100	93.562	ENSUMAG00000004002	SBNO1	50	93.562	Ursus_maritimus
ENSMAUG00000004834	-	100	87.536	ENSVPAG00000007024	SBNO1	50	87.536	Vicugna_pacos
ENSMAUG00000004834	-	100	93.419	ENSVVUG00000027807	SBNO1	50	93.419	Vulpes_vulpes
ENSMAUG00000004834	-	99	75.753	ENSXETG00000031930	SBNO1	70	91.667	Xenopus_tropicalis
ENSMAUG00000004834	-	98	75.181	ENSXCOG00000011607	sbno1	83	73.571	Xiphophorus_couchianus
ENSMAUG00000004834	-	98	76.947	ENSXMAG00000002140	sbno1	50	74.574	Xiphophorus_maculatus