EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000005013 (Gene tree)
Gene ID: 101830764
Gene Symbol: Safb
Alias: 3110021E02Rik|5330423C17Rik|SAFB1
Full Name: scaffold attachment factor B1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 6211 bases
Position: chrAPMT01210367.1:4704-10914
Accession: 101830764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000004114	RRM_1	PF00076.22	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000006175	-	2890	XM_005088122	ENSMAUP00000004114	486 (aa)	XP_005088179	-

Gene Model

Click here to download ENSMAUG00000005013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000005013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000005013	Safb	100	90.760	ENSG00000160633	SAFB	81	93.600	Homo_sapiens
ENSMAUG00000005013	Safb	100	90.554	ENSAMEG00000012254	SAFB	53	89.733	Ailuropoda_melanoleuca
ENSMAUG00000005013	Safb	100	90.760	ENSANAG00000028821	SAFB	57	90.574	Aotus_nancymaae
ENSMAUG00000005013	Safb	100	84.805	ENSBTAG00000007875	SAFB	52	84.805	Bos_taurus
ENSMAUG00000005013	Safb	100	90.369	ENSCJAG00000017081	SAFB	91	90.369	Callithrix_jacchus
ENSMAUG00000005013	Safb	100	90.965	ENSCAFG00020018943	SAFB	53	90.965	Canis_lupus_dingo
ENSMAUG00000005013	Safb	100	84.805	ENSCHIG00000007262	SAFB	52	84.805	Capra_hircus
ENSMAUG00000005013	Safb	100	73.663	ENSTSYG00000001851	-	90	70.161	Carlito_syrichta
ENSMAUG00000005013	Safb	100	90.741	ENSCPOG00000026322	SAFB	52	90.329	Cavia_porcellus
ENSMAUG00000005013	Safb	100	90.369	ENSCCAG00000020193	SAFB	57	90.369	Cebus_capucinus
ENSMAUG00000005013	Safb	100	90.965	ENSCATG00000029994	SAFB	57	90.779	Cercocebus_atys
ENSMAUG00000005013	Safb	100	90.965	ENSCLAG00000007734	SAFB	52	89.528	Chinchilla_lanigera
ENSMAUG00000005013	Safb	100	90.760	ENSCSAG00000009949	SAFB	53	90.760	Chlorocebus_sabaeus
ENSMAUG00000005013	Safb	87	97.619	ENSCHOG00000003208	SAFB	50	97.619	Choloepus_hoffmanni
ENSMAUG00000005013	Safb	100	85.010	ENSCANG00000019754	-	53	85.010	Colobus_angolensis_palliatus
ENSMAUG00000005013	Safb	91	92.040	ENSCANG00000004774	-	51	92.040	Colobus_angolensis_palliatus
ENSMAUG00000005013	Safb	100	99.383	ENSCGRG00001002254	Safb	52	99.383	Cricetulus_griseus_chok1gshd
ENSMAUG00000005013	Safb	100	99.383	ENSCGRG00000011529	Safb	54	99.383	Cricetulus_griseus_crigri
ENSMAUG00000005013	Safb	96	72.363	ENSDORG00000016200	Safb	51	79.435	Dipodomys_ordii
ENSMAUG00000005013	Safb	100	91.207	ENSEASG00005023019	SAFB	53	91.616	Equus_asinus_asinus
ENSMAUG00000005013	Safb	100	91.358	ENSFCAG00000011835	SAFB	53	91.358	Felis_catus
ENSMAUG00000005013	Safb	100	90.349	ENSGGOG00000015109	SAFB	57	90.164	Gorilla_gorilla
ENSMAUG00000005013	Safb	100	90.947	ENSHGLG00000015883	SAFB	52	90.947	Heterocephalus_glaber_female
ENSMAUG00000005013	Safb	100	92.593	ENSSTOG00000002783	SAFB	56	92.593	Ictidomys_tridecemlineatus
ENSMAUG00000005013	Safb	100	93.827	ENSJJAG00000009021	Safb	54	92.464	Jaculus_jaculus
ENSMAUG00000005013	Safb	98	86.335	ENSLAFG00000003840	SAFB	53	84.265	Loxodonta_africana
ENSMAUG00000005013	Safb	100	90.779	ENSMFAG00000003885	SAFB	57	90.779	Macaca_fascicularis
ENSMAUG00000005013	Safb	100	90.965	ENSMMUG00000017970	SAFB	57	90.779	Macaca_mulatta
ENSMAUG00000005013	Safb	100	87.090	ENSMNEG00000035637	SAFB	58	85.626	Macaca_nemestrina
ENSMAUG00000005013	Safb	100	85.540	ENSMLEG00000038637	SAFB	54	82.834	Mandrillus_leucophaeus
ENSMAUG00000005013	Safb	100	87.910	ENSMICG00000008739	-	57	84.221	Microcebus_murinus
ENSMAUG00000005013	Safb	100	98.148	ENSMOCG00000014040	Safb	52	98.148	Microtus_ochrogaster
ENSMAUG00000005013	Safb	100	75.644	ENSMODG00000001236	SAFB	53	76.040	Monodelphis_domestica
ENSMAUG00000005013	Safb	100	96.914	MGP_CAROLIEiJ_G0021780	Safb	52	96.914	Mus_caroli
ENSMAUG00000005013	Safb	100	97.325	ENSMUSG00000071054	Safb	52	97.325	Mus_musculus
ENSMAUG00000005013	Safb	100	96.708	MGP_PahariEiJ_G0020769	Safb	52	96.708	Mus_pahari
ENSMAUG00000005013	Safb	100	90.965	ENSMPUG00000006123	SAFB	50	90.965	Mustela_putorius_furo
ENSMAUG00000005013	Safb	100	89.117	ENSMLUG00000001081	SAFB	53	89.117	Myotis_lucifugus
ENSMAUG00000005013	Safb	100	93.210	ENSNGAG00000019882	Safb	51	93.210	Nannospalax_galili
ENSMAUG00000005013	Safb	99	84.584	ENSNLEG00000013551	SAFB	55	90.646	Nomascus_leucogenys
ENSMAUG00000005013	Safb	91	83.784	ENSOPRG00000011561	-	55	84.685	Ochotona_princeps
ENSMAUG00000005013	Safb	100	92.181	ENSODEG00000014838	SAFB	52	92.181	Octodon_degus
ENSMAUG00000005013	Safb	100	84.521	ENSOGAG00000027769	SAFB	53	81.466	Otolemur_garnettii
ENSMAUG00000005013	Safb	100	78.029	ENSOARG00000007662	-	52	74.333	Ovis_aries
ENSMAUG00000005013	Safb	100	90.369	ENSPPAG00000035129	SAFB	57	90.369	Pan_paniscus
ENSMAUG00000005013	Safb	100	91.358	ENSPPRG00000017197	SAFB	53	91.358	Panthera_pardus
ENSMAUG00000005013	Safb	100	90.369	ENSPTRG00000010335	SAFB	57	90.369	Pan_troglodytes
ENSMAUG00000005013	Safb	100	90.779	ENSPANG00000007770	SAFB	57	90.779	Papio_anubis
ENSMAUG00000005013	Safb	100	98.560	ENSPEMG00000020428	Safb	52	98.560	Peromyscus_maniculatus_bairdii
ENSMAUG00000005013	Safb	100	78.571	ENSPCIG00000009504	-	89	78.971	Phascolarctos_cinereus
ENSMAUG00000005013	Safb	100	90.760	ENSPPYG00000009428	SAFB	53	90.760	Pongo_abelii
ENSMAUG00000005013	Safb	100	85.010	ENSPCAG00000006475	SAFB	53	84.600	Procavia_capensis
ENSMAUG00000005013	Safb	100	81.874	ENSPCOG00000014090	SAFB	57	76.434	Propithecus_coquereli
ENSMAUG00000005013	Safb	100	82.546	ENSPVAG00000004913	SAFB	53	82.136	Pteropus_vampyrus
ENSMAUG00000005013	Safb	100	95.902	ENSRNOG00000050543	Safb	55	95.680	Rattus_norvegicus
ENSMAUG00000005013	Safb	100	85.041	ENSRBIG00000042509	SAFB	61	85.041	Rhinopithecus_bieti
ENSMAUG00000005013	Safb	100	90.574	ENSRROG00000029278	SAFB	57	90.574	Rhinopithecus_roxellana
ENSMAUG00000005013	Safb	100	90.554	ENSSBOG00000026291	SAFB	57	90.369	Saimiri_boliviensis_boliviensis
ENSMAUG00000005013	Safb	100	82.377	ENSSARG00000010475	SAFB	56	82.582	Sorex_araneus
ENSMAUG00000005013	Safb	100	88.115	ENSTTRG00000013588	SAFB	53	87.705	Tursiops_truncatus
ENSMAUG00000005013	Safb	100	90.760	ENSUAMG00000024543	SAFB	62	90.760	Ursus_americanus