EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000005814 (Gene tree)
Gene ID: 101833463
Gene Symbol: Fmr1
Alias: -
Full Name: fragile X mental retardation 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 40008 bases
Position: chrKB708333.1:1545168-1585175
Accession: 101833463
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000004547	FXMRP1_C_core	PF12235.8	4.4e-47	1	1
ENSMAUP00000004545	FXMRP1_C_core	PF12235.8	6.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000007282	-	954	-	ENSMAUP00000004547	317 (aa)	-	-
ENSMAUT00000007275	-	1068	XM_013125095	ENSMAUP00000004545	355 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000005814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000005814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000005814	Fmr1	94	97.659	ENSG00000102081	FMR1	100	96.639	Homo_sapiens
ENSMAUG00000005814	Fmr1	95	94.675	ENSAMEG00000014996	FMR1	53	94.675	Ailuropoda_melanoleuca
ENSMAUG00000005814	Fmr1	71	90.000	ENSACIG00000022552	fmr1	50	90.000	Amphilophus_citrinellus
ENSMAUG00000005814	Fmr1	77	90.000	ENSAOCG00000008025	fmr1	51	90.000	Amphiprion_ocellaris
ENSMAUG00000005814	Fmr1	95	70.807	ENSAPLG00000003811	FMR1	54	70.807	Anas_platyrhynchos
ENSMAUG00000005814	Fmr1	99	72.599	ENSACAG00000007899	FMR1	55	74.336	Anolis_carolinensis
ENSMAUG00000005814	Fmr1	95	95.266	ENSANAG00000026715	FMR1	55	95.266	Aotus_nancymaae
ENSMAUG00000005814	Fmr1	95	94.379	ENSBTAG00000012552	FMR1	56	94.379	Bos_taurus
ENSMAUG00000005814	Fmr1	95	97.667	ENSCJAG00000003925	FMR1	52	97.667	Callithrix_jacchus
ENSMAUG00000005814	Fmr1	95	91.420	ENSCAFG00000019085	FMR1	52	91.420	Canis_familiaris
ENSMAUG00000005814	Fmr1	95	96.000	ENSCHIG00000000198	FMR1	54	94.675	Capra_hircus
ENSMAUG00000005814	Fmr1	95	96.450	ENSTSYG00000014392	FMR1	53	96.450	Carlito_syrichta
ENSMAUG00000005814	Fmr1	95	98.333	ENSCAPG00000008575	FMR1	62	98.333	Cavia_aperea
ENSMAUG00000005814	Fmr1	95	98.333	ENSCPOG00000003723	FMR1	55	95.562	Cavia_porcellus
ENSMAUG00000005814	Fmr1	95	96.450	ENSCCAG00000021737	FMR1	53	96.450	Cebus_capucinus
ENSMAUG00000005814	Fmr1	95	95.858	ENSCATG00000038319	FMR1	62	95.858	Cercocebus_atys
ENSMAUG00000005814	Fmr1	95	98.333	ENSCLAG00000001233	FMR1	52	98.333	Chinchilla_lanigera
ENSMAUG00000005814	Fmr1	95	92.114	ENSCSAG00000007281	FMR1	52	92.114	Chlorocebus_sabaeus
ENSMAUG00000005814	Fmr1	70	85.141	ENSCHOG00000006340	-	61	85.214	Choloepus_hoffmanni
ENSMAUG00000005814	Fmr1	83	87.500	ENSCPBG00000020840	FMR1	50	72.485	Chrysemys_picta_bellii
ENSMAUG00000005814	Fmr1	95	95.858	ENSCANG00000033482	FMR1	53	95.858	Colobus_angolensis_palliatus
ENSMAUG00000005814	Fmr1	95	99.000	ENSCGRG00001012567	Fmr1	53	98.225	Cricetulus_griseus_chok1gshd
ENSMAUG00000005814	Fmr1	95	99.000	ENSCGRG00000005009	Fmr1	54	98.225	Cricetulus_griseus_crigri
ENSMAUG00000005814	Fmr1	83	90.000	ENSCVAG00000011644	fmr1	55	70.732	Cyprinodon_variegatus
ENSMAUG00000005814	Fmr1	95	95.858	ENSDNOG00000019486	FMR1	53	95.858	Dasypus_novemcinctus
ENSMAUG00000005814	Fmr1	95	98.667	ENSDORG00000012501	Fmr1	51	98.667	Dipodomys_ordii
ENSMAUG00000005814	Fmr1	95	95.562	ENSEASG00005014017	FMR1	58	95.562	Equus_asinus_asinus
ENSMAUG00000005814	Fmr1	95	92.429	ENSECAG00000032767	FMR1	52	92.429	Equus_caballus
ENSMAUG00000005814	Fmr1	95	95.266	ENSFCAG00000007228	FMR1	53	95.266	Felis_catus
ENSMAUG00000005814	Fmr1	95	97.667	ENSFDAG00000017613	FMR1	55	96.154	Fukomys_damarensis
ENSMAUG00000005814	Fmr1	63	90.000	ENSFHEG00000000636	fmr1	51	43.127	Fundulus_heteroclitus
ENSMAUG00000005814	Fmr1	95	97.667	ENSGGOG00000010373	FMR1	54	96.154	Gorilla_gorilla
ENSMAUG00000005814	Fmr1	95	95.562	ENSHGLG00000000576	FMR1	53	95.562	Heterocephalus_glaber_female
ENSMAUG00000005814	Fmr1	95	97.000	ENSHGLG00100008323	FMR1	55	95.562	Heterocephalus_glaber_male
ENSMAUG00000005814	Fmr1	83	73.171	ENSIPUG00000014418	fmr1-b	50	59.004	Ictalurus_punctatus
ENSMAUG00000005814	Fmr1	95	93.491	ENSSTOG00000003260	FMR1	53	93.491	Ictidomys_tridecemlineatus
ENSMAUG00000005814	Fmr1	95	51.020	ENSLACG00000005358	FMR1	53	51.020	Latimeria_chalumnae
ENSMAUG00000005814	Fmr1	95	57.101	ENSLOCG00000015397	fmr1	52	56.522	Lepisosteus_oculatus
ENSMAUG00000005814	Fmr1	95	96.154	ENSLAFG00000013592	FMR1	55	96.154	Loxodonta_africana
ENSMAUG00000005814	Fmr1	95	95.858	ENSMFAG00000000241	FMR1	53	95.858	Macaca_fascicularis
ENSMAUG00000005814	Fmr1	95	95.858	ENSMMUG00000015814	FMR1	53	95.858	Macaca_mulatta
ENSMAUG00000005814	Fmr1	95	95.858	ENSMNEG00000024342	FMR1	53	95.858	Macaca_nemestrina
ENSMAUG00000005814	Fmr1	95	95.858	ENSMLEG00000035664	FMR1	53	95.858	Mandrillus_leucophaeus
ENSMAUG00000005814	Fmr1	83	87.500	ENSMGAG00000008270	FMR1	52	69.969	Meleagris_gallopavo
ENSMAUG00000005814	Fmr1	95	92.744	ENSMICG00000000838	FMR1	52	92.744	Microcebus_murinus
ENSMAUG00000005814	Fmr1	95	99.333	ENSMOCG00000005190	Fmr1	51	99.333	Microtus_ochrogaster
ENSMAUG00000005814	Fmr1	73	90.000	ENSMMOG00000010038	fmr1	51	87.500	Mola_mola
ENSMAUG00000005814	Fmr1	95	84.320	ENSMODG00000005550	FMR1	53	83.728	Monodelphis_domestica
ENSMAUG00000005814	Fmr1	75	90.000	ENSMALG00000012587	fmr1	51	90.000	Monopterus_albus
ENSMAUG00000005814	Fmr1	95	97.667	MGP_CAROLIEiJ_G0033121	Fmr1	53	96.746	Mus_caroli
ENSMAUG00000005814	Fmr1	95	98.000	ENSMUSG00000000838	Fmr1	53	96.450	Mus_musculus
ENSMAUG00000005814	Fmr1	95	97.333	MGP_PahariEiJ_G0031663	Fmr1	53	96.154	Mus_pahari
ENSMAUG00000005814	Fmr1	95	98.000	MGP_SPRETEiJ_G0034275	Fmr1	53	96.746	Mus_spretus
ENSMAUG00000005814	Fmr1	95	91.124	ENSMPUG00000011485	FMR1	52	91.124	Mustela_putorius_furo
ENSMAUG00000005814	Fmr1	95	94.690	ENSMLUG00000000587	FMR1	54	94.690	Myotis_lucifugus
ENSMAUG00000005814	Fmr1	95	97.667	ENSNGAG00000020908	Fmr1	55	96.450	Nannospalax_galili
ENSMAUG00000005814	Fmr1	94	97.993	ENSNLEG00000013269	FMR1	53	96.154	Nomascus_leucogenys
ENSMAUG00000005814	Fmr1	95	98.000	ENSODEG00000008377	FMR1	55	96.450	Octodon_degus
ENSMAUG00000005814	Fmr1	75	90.000	ENSONIG00000015823	fmr1	52	50.141	Oreochromis_niloticus
ENSMAUG00000005814	Fmr1	95	79.882	ENSOANG00000001097	FMR1	55	79.290	Ornithorhynchus_anatinus
ENSMAUG00000005814	Fmr1	95	96.746	ENSOCUG00000014621	FMR1	53	96.746	Oryctolagus_cuniculus
ENSMAUG00000005814	Fmr1	75	86.667	ENSORLG00000009094	fmr1	51	45.455	Oryzias_latipes
ENSMAUG00000005814	Fmr1	64	86.667	ENSORLG00015015300	fmr1	51	46.703	Oryzias_latipes_hsok
ENSMAUG00000005814	Fmr1	78	86.667	ENSOMEG00000017281	fmr1	53	86.667	Oryzias_melastigma
ENSMAUG00000005814	Fmr1	95	94.675	ENSOGAG00000013061	FMR1	53	94.675	Otolemur_garnettii
ENSMAUG00000005814	Fmr1	95	94.675	ENSOARG00000009673	FMR1	53	94.675	Ovis_aries
ENSMAUG00000005814	Fmr1	95	97.667	ENSPPAG00000041836	FMR1	51	97.667	Pan_paniscus
ENSMAUG00000005814	Fmr1	95	95.266	ENSPPRG00000018962	FMR1	53	95.266	Panthera_pardus
ENSMAUG00000005814	Fmr1	95	96.667	ENSPTIG00000019115	FMR1	53	96.667	Panthera_tigris_altaica
ENSMAUG00000005814	Fmr1	95	96.154	ENSPTRG00000022349	FMR1	53	96.154	Pan_troglodytes
ENSMAUG00000005814	Fmr1	95	95.858	ENSPANG00000018447	FMR1	54	95.858	Papio_anubis
ENSMAUG00000005814	Fmr1	95	99.000	ENSPEMG00000017439	Fmr1	51	99.000	Peromyscus_maniculatus_bairdii
ENSMAUG00000005814	Fmr1	95	84.615	ENSPCIG00000022498	FMR1	56	84.024	Phascolarctos_cinereus
ENSMAUG00000005814	Fmr1	63	90.000	ENSPFOG00000004138	fmr1	52	45.856	Poecilia_formosa
ENSMAUG00000005814	Fmr1	63	90.000	ENSPMEG00000003164	fmr1	51	44.504	Poecilia_mexicana
ENSMAUG00000005814	Fmr1	63	90.000	ENSPREG00000014149	fmr1	63	90.000	Poecilia_reticulata
ENSMAUG00000005814	Fmr1	95	93.491	ENSPCAG00000011936	FMR1	53	93.491	Procavia_capensis
ENSMAUG00000005814	Fmr1	95	93.375	ENSPCOG00000028651	FMR1	52	93.375	Propithecus_coquereli
ENSMAUG00000005814	Fmr1	95	83.728	ENSPVAG00000013386	FMR1	53	83.728	Pteropus_vampyrus
ENSMAUG00000005814	Fmr1	95	92.000	ENSRNOG00000057464	Fmr1	52	90.828	Rattus_norvegicus
ENSMAUG00000005814	Fmr1	95	91.643	ENSRBIG00000028998	FMR1	58	91.643	Rhinopithecus_bieti
ENSMAUG00000005814	Fmr1	95	95.562	ENSRROG00000044396	FMR1	54	95.562	Rhinopithecus_roxellana
ENSMAUG00000005814	Fmr1	95	92.429	ENSSBOG00000026623	FMR1	52	92.429	Saimiri_boliviensis_boliviensis
ENSMAUG00000005814	Fmr1	95	82.059	ENSSHAG00000012940	FMR1	53	81.471	Sarcophilus_harrisii
ENSMAUG00000005814	Fmr1	95	83.728	ENSSARG00000003475	FMR1	55	83.728	Sorex_araneus
ENSMAUG00000005814	Fmr1	63	90.000	ENSSPAG00000005758	fmr1	50	90.000	Stegastes_partitus
ENSMAUG00000005814	Fmr1	95	96.154	ENSSSCG00000012727	FMR1	61	92.012	Sus_scrofa
ENSMAUG00000005814	Fmr1	95	71.845	ENSTGUG00000004735	FMR1	52	71.197	Taeniopygia_guttata
ENSMAUG00000005814	Fmr1	52	75.758	ENSTNIG00000002152	-	74	69.444	Tetraodon_nigroviridis
ENSMAUG00000005814	Fmr1	95	96.746	ENSTBEG00000003253	FMR1	57	96.746	Tupaia_belangeri
ENSMAUG00000005814	Fmr1	95	95.266	ENSTTRG00000000613	FMR1	57	95.266	Tursiops_truncatus
ENSMAUG00000005814	Fmr1	95	94.970	ENSUAMG00000013787	FMR1	54	94.970	Ursus_americanus
ENSMAUG00000005814	Fmr1	95	89.971	ENSUMAG00000009869	FMR1	53	89.971	Ursus_maritimus
ENSMAUG00000005814	Fmr1	95	94.675	ENSVPAG00000008700	FMR1	55	94.970	Vicugna_pacos
ENSMAUG00000005814	Fmr1	95	95.562	ENSVVUG00000000753	FMR1	56	95.562	Vulpes_vulpes
ENSMAUG00000005814	Fmr1	78	82.500	ENSXETG00000019647	fmr1	50	82.500	Xenopus_tropicalis