EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000006516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 956 bases
Position: chrKB708403.1:808634-809589
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000004820	LSM	PF01423.22	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000007902	-	198	-	ENSMAUP00000004820	65 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000006516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000006516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000006516	-	92	88.333	ENSMAUG00000020656	-	77	88.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000006516	-	80	100.000	ENSG00000125835	SNRPB	74	100.000	Homo_sapiens
ENSMAUG00000006516	-	75	84.615	ENSAPEG00000008846	-	79	84.615	Amphiprion_percula
ENSMAUG00000006516	-	89	70.690	ENSBTAG00000024548	-	78	70.690	Bos_taurus
ENSMAUG00000006516	-	80	94.231	ENSCJAG00000041673	-	67	94.231	Callithrix_jacchus
ENSMAUG00000006516	-	72	95.745	ENSCAFG00020020370	-	85	78.125	Canis_lupus_dingo
ENSMAUG00000006516	-	65	97.619	ENSCAFG00020003638	-	55	97.619	Canis_lupus_dingo
ENSMAUG00000006516	-	71	95.652	ENSCAFG00020013247	-	55	95.652	Canis_lupus_dingo
ENSMAUG00000006516	-	80	73.077	ENSCHIG00000024610	-	76	74.510	Capra_hircus
ENSMAUG00000006516	-	78	86.275	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSMAUG00000006516	-	92	88.333	ENSCANG00000019461	SNRPB	73	88.333	Colobus_angolensis_palliatus
ENSMAUG00000006516	-	89	70.690	ENSFCAG00000041049	-	72	70.690	Felis_catus
ENSMAUG00000006516	-	63	82.927	ENSFHEG00000006534	-	56	82.927	Fundulus_heteroclitus
ENSMAUG00000006516	-	80	100.000	MGP_CAROLIEiJ_G0024293	Snrpb	74	100.000	Mus_caroli
ENSMAUG00000006516	-	80	100.000	ENSMUSG00000027404	Snrpb	74	100.000	Mus_musculus
ENSMAUG00000006516	-	80	100.000	MGP_PahariEiJ_G0025738	Snrpb	74	100.000	Mus_pahari
ENSMAUG00000006516	-	80	100.000	MGP_SPRETEiJ_G0025213	Snrpb	73	100.000	Mus_spretus
ENSMAUG00000006516	-	89	75.862	ENSPPRG00000024804	-	74	76.923	Panthera_pardus
ENSMAUG00000006516	-	78	78.431	ENSPPRG00000018908	-	58	78.431	Panthera_pardus
ENSMAUG00000006516	-	80	94.231	ENSPMAG00000004923	SNRPB	58	94.231	Petromyzon_marinus
ENSMAUG00000006516	-	80	100.000	ENSRNOG00000006961	Snrpb	94	83.582	Rattus_norvegicus
ENSMAUG00000006516	-	80	75.000	ENSUAMG00000016301	-	70	75.000	Ursus_americanus
ENSMAUG00000006516	-	80	75.000	ENSUMAG00000011571	-	63	75.000	Ursus_maritimus
ENSMAUG00000006516	-	80	90.385	ENSVVUG00000011423	-	68	90.385	Vulpes_vulpes