EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000006829 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 2945 bases
Position: chrKB708129.1:24829288-24832232
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000005024	LSM	PF01423.22	8.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000008265	-	462	-	ENSMAUP00000005024	153 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000006829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000006829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000006829	-	59	84.444	ENSMAUG00000016502	-	87	80.412
ENSMAUG00000006829	-	59	84.444	ENSMAUG00000016467	-	87	80.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000006829	-	62	94.845	ENSG00000167088	SNRPD1	82	94.845	Homo_sapiens
ENSMAUG00000006829	-	59	95.556	ENSAPOG00000019446	snrpd1	53	90.722	Acanthochromis_polyacanthus
ENSMAUG00000006829	-	63	94.949	ENSAMEG00000002576	SNRPD1	85	94.949	Ailuropoda_melanoleuca
ENSMAUG00000006829	-	57	95.402	ENSACIG00000011263	snrpd1	84	90.426	Amphilophus_citrinellus
ENSMAUG00000006829	-	59	95.556	ENSAOCG00000007406	snrpd1	82	90.722	Amphiprion_ocellaris
ENSMAUG00000006829	-	59	90.000	ENSAPEG00000014961	snrpd1	81	85.567	Amphiprion_percula
ENSMAUG00000006829	-	57	95.402	ENSAPEG00000012539	SNRPD1	84	90.426	Amphiprion_percula
ENSMAUG00000006829	-	59	95.556	ENSATEG00000014399	snrpd1	84	90.426	Anabas_testudineus
ENSMAUG00000006829	-	65	93.069	ENSAPLG00000012256	SNRPD1	85	93.069	Anas_platyrhynchos
ENSMAUG00000006829	-	62	94.845	ENSACAG00000006364	SNRPD1	82	94.845	Anolis_carolinensis
ENSMAUG00000006829	-	62	94.845	ENSANAG00000025641	SNRPD1	82	94.845	Aotus_nancymaae
ENSMAUG00000006829	-	57	95.402	ENSACLG00000017406	snrpd1	84	90.426	Astatotilapia_calliptera
ENSMAUG00000006829	-	76	81.356	ENSAMXG00000004589	snrpd1	95	81.356	Astyanax_mexicanus
ENSMAUG00000006829	-	58	97.753	ENSBTAG00000055316	-	81	93.617	Bos_taurus
ENSMAUG00000006829	-	59	96.667	ENSBTAG00000047266	-	83	89.899	Bos_taurus
ENSMAUG00000006829	-	62	90.909	ENSBTAG00000012376	-	74	90.909	Bos_taurus
ENSMAUG00000006829	-	62	94.845	ENSBTAG00000008292	SNRPD1	82	94.845	Bos_taurus
ENSMAUG00000006829	-	56	77.907	WBGene00004916	snr-3	75	73.684	Caenorhabditis_elegans
ENSMAUG00000006829	-	62	94.845	ENSCJAG00000042955	SNRPD1	82	94.845	Callithrix_jacchus
ENSMAUG00000006829	-	62	94.845	ENSCAFG00000018247	SNRPD1	82	94.845	Canis_familiaris
ENSMAUG00000006829	-	59	100.000	ENSCAFG00020015914	SNRPD1	70	100.000	Canis_lupus_dingo
ENSMAUG00000006829	-	63	93.939	ENSCHIG00000005557	SNRPD1	83	93.939	Capra_hircus
ENSMAUG00000006829	-	62	94.845	ENSTSYG00000030028	SNRPD1	82	94.845	Carlito_syrichta
ENSMAUG00000006829	-	63	92.857	ENSCAPG00000008103	SNRPD1	84	92.857	Cavia_aperea
ENSMAUG00000006829	-	62	94.845	ENSCPOG00000004679	SNRPD1	84	92.857	Cavia_porcellus
ENSMAUG00000006829	-	62	93.814	ENSCCAG00000020611	-	82	93.814	Cebus_capucinus
ENSMAUG00000006829	-	60	93.478	ENSCCAG00000005390	-	83	88.889	Cebus_capucinus
ENSMAUG00000006829	-	59	95.556	ENSCCAG00000016652	-	82	90.722	Cebus_capucinus
ENSMAUG00000006829	-	62	94.845	ENSCCAG00000032658	SNRPD1	82	94.845	Cebus_capucinus
ENSMAUG00000006829	-	62	94.845	ENSCATG00000039978	SNRPD1	82	94.845	Cercocebus_atys
ENSMAUG00000006829	-	62	94.845	ENSCLAG00000008691	SNRPD1	82	94.845	Chinchilla_lanigera
ENSMAUG00000006829	-	62	94.845	ENSCSAG00000017654	SNRPD1	82	94.845	Chlorocebus_sabaeus
ENSMAUG00000006829	-	59	100.000	ENSCPBG00000023143	SNRPD1	78	100.000	Chrysemys_picta_bellii
ENSMAUG00000006829	-	54	87.805	ENSCING00000024100	-	80	76.000	Ciona_intestinalis
ENSMAUG00000006829	-	54	85.542	ENSCSAVG00000004578	-	77	77.083	Ciona_savignyi
ENSMAUG00000006829	-	65	95.050	ENSCGRG00001021055	-	82	95.050	Cricetulus_griseus_chok1gshd
ENSMAUG00000006829	-	59	73.626	ENSCGRG00001009945	-	85	71.875	Cricetulus_griseus_chok1gshd
ENSMAUG00000006829	-	59	73.626	ENSCGRG00000006224	-	85	71.875	Cricetulus_griseus_crigri
ENSMAUG00000006829	-	65	95.050	ENSCGRG00000000490	-	82	95.050	Cricetulus_griseus_crigri
ENSMAUG00000006829	-	60	93.478	ENSCSEG00000018141	snrpd1	82	89.691	Cynoglossus_semilaevis
ENSMAUG00000006829	-	59	95.556	ENSCVAG00000000534	snrpd1	82	90.722	Cyprinodon_variegatus
ENSMAUG00000006829	-	59	96.667	ENSDARG00000011648	snrpd1	95	96.667	Danio_rerio
ENSMAUG00000006829	-	62	94.845	ENSDNOG00000040310	SNRPD1	82	94.845	Dasypus_novemcinctus
ENSMAUG00000006829	-	62	94.845	ENSDORG00000008349	Snrpd1	82	94.845	Dipodomys_ordii
ENSMAUG00000006829	-	59	82.222	FBgn0261933	SmD1	75	80.645	Drosophila_melanogaster
ENSMAUG00000006829	-	62	89.474	ENSEBUG00000003170	snrpd1	94	89.474	Eptatretus_burgeri
ENSMAUG00000006829	-	60	94.681	ENSEASG00005002433	SNRPD1	84	94.681	Equus_asinus_asinus
ENSMAUG00000006829	-	60	94.681	ENSECAG00000014373	SNRPD1	84	94.681	Equus_caballus
ENSMAUG00000006829	-	58	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSMAUG00000006829	-	73	81.416	ENSELUG00000000088	snrpd1	95	81.416	Esox_lucius
ENSMAUG00000006829	-	62	94.845	ENSFCAG00000012352	SNRPD1	82	94.845	Felis_catus
ENSMAUG00000006829	-	60	94.681	ENSFALG00000002646	SNRPD1	84	94.681	Ficedula_albicollis
ENSMAUG00000006829	-	62	91.753	ENSGMOG00000015607	snrpd1	82	91.753	Gadus_morhua
ENSMAUG00000006829	-	62	94.845	ENSGALG00000041334	SNRPD1	82	94.845	Gallus_gallus
ENSMAUG00000006829	-	59	95.556	ENSGAFG00000011171	snrpd1	82	90.722	Gambusia_affinis
ENSMAUG00000006829	-	62	91.753	ENSGACG00000005201	SNRPD1	82	91.753	Gasterosteus_aculeatus
ENSMAUG00000006829	-	62	94.845	ENSGAGG00000011197	SNRPD1	82	94.845	Gopherus_agassizii
ENSMAUG00000006829	-	62	94.845	ENSGGOG00000041053	SNRPD1	82	94.845	Gorilla_gorilla
ENSMAUG00000006829	-	59	94.444	ENSGGOG00000026706	-	81	89.691	Gorilla_gorilla
ENSMAUG00000006829	-	60	94.565	ENSHBUG00000003236	snrpd1	82	90.722	Haplochromis_burtoni
ENSMAUG00000006829	-	62	94.845	ENSHGLG00000007152	SNRPD1	82	94.845	Heterocephalus_glaber_female
ENSMAUG00000006829	-	62	94.845	ENSHGLG00100008618	SNRPD1	82	94.845	Heterocephalus_glaber_male
ENSMAUG00000006829	-	59	95.556	ENSIPUG00000003576	snrpd1	82	90.722	Ictalurus_punctatus
ENSMAUG00000006829	-	62	94.845	ENSSTOG00000000485	SNRPD1	82	94.845	Ictidomys_tridecemlineatus
ENSMAUG00000006829	-	62	94.845	ENSJJAG00000017698	Snrpd1	82	94.845	Jaculus_jaculus
ENSMAUG00000006829	-	59	95.556	ENSKMAG00000005987	snrpd1	82	90.722	Kryptolebias_marmoratus
ENSMAUG00000006829	-	59	95.556	ENSLBEG00000003327	snrpd1	82	90.722	Labrus_bergylta
ENSMAUG00000006829	-	65	92.079	ENSLACG00000001955	SNRPD1	82	94.845	Latimeria_chalumnae
ENSMAUG00000006829	-	59	97.778	ENSLOCG00000002003	snrpd1	77	97.778	Lepisosteus_oculatus
ENSMAUG00000006829	-	63	93.939	ENSLAFG00000005819	SNRPD1	84	93.939	Loxodonta_africana
ENSMAUG00000006829	-	62	94.845	ENSMFAG00000042080	SNRPD1	82	94.845	Macaca_fascicularis
ENSMAUG00000006829	-	61	94.792	ENSMMUG00000003992	SNRPD1	82	94.792	Macaca_mulatta
ENSMAUG00000006829	-	62	94.845	ENSMNEG00000041296	SNRPD1	82	94.845	Macaca_nemestrina
ENSMAUG00000006829	-	63	93.939	ENSMLEG00000028659	SNRPD1	82	94.845	Mandrillus_leucophaeus
ENSMAUG00000006829	-	59	95.556	ENSMAMG00000012971	snrpd1	82	90.722	Mastacembelus_armatus
ENSMAUG00000006829	-	59	95.556	ENSMZEG00005004685	snrpd1	82	90.722	Maylandia_zebra
ENSMAUG00000006829	-	64	93.000	ENSMGAG00000011598	SNRPD1	83	93.000	Meleagris_gallopavo
ENSMAUG00000006829	-	62	94.845	ENSMICG00000044066	SNRPD1	82	94.845	Microcebus_murinus
ENSMAUG00000006829	-	62	94.845	ENSMOCG00000017367	Snrpd1	82	94.845	Microtus_ochrogaster
ENSMAUG00000006829	-	59	95.556	ENSMMOG00000019089	snrpd1	82	90.722	Mola_mola
ENSMAUG00000006829	-	62	94.845	ENSMODG00000021487	SNRPD1	83	94.792	Monodelphis_domestica
ENSMAUG00000006829	-	59	95.556	ENSMALG00000014459	snrpd1	82	90.722	Monopterus_albus
ENSMAUG00000006829	-	62	94.845	MGP_CAROLIEiJ_G0021994	Snrpd1	82	94.845	Mus_caroli
ENSMAUG00000006829	-	62	94.845	ENSMUSG00000002477	Snrpd1	82	94.845	Mus_musculus
ENSMAUG00000006829	-	62	94.845	MGP_PahariEiJ_G0018731	Snrpd1	82	94.845	Mus_pahari
ENSMAUG00000006829	-	62	94.845	MGP_SPRETEiJ_G0022910	Snrpd1	82	94.845	Mus_spretus
ENSMAUG00000006829	-	62	93.814	ENSMPUG00000020041	-	82	93.814	Mustela_putorius_furo
ENSMAUG00000006829	-	63	94.949	ENSMPUG00000005567	-	85	94.949	Mustela_putorius_furo
ENSMAUG00000006829	-	63	93.939	ENSMLUG00000009124	SNRPD1	77	93.939	Myotis_lucifugus
ENSMAUG00000006829	-	62	94.845	ENSNGAG00000023946	Snrpd1	82	94.845	Nannospalax_galili
ENSMAUG00000006829	-	60	94.565	ENSNBRG00000012119	snrpd1	76	94.565	Neolamprologus_brichardi
ENSMAUG00000006829	-	62	91.753	ENSNLEG00000031430	SNRPD1	81	91.753	Nomascus_leucogenys
ENSMAUG00000006829	-	62	94.845	ENSODEG00000005764	SNRPD1	82	94.845	Octodon_degus
ENSMAUG00000006829	-	59	95.556	ENSONIG00000002486	snrpd1	82	90.722	Oreochromis_niloticus
ENSMAUG00000006829	-	59	90.000	ENSOANG00000004638	-	80	87.368	Ornithorhynchus_anatinus
ENSMAUG00000006829	-	62	93.814	ENSOCUG00000014399	-	82	93.814	Oryctolagus_cuniculus
ENSMAUG00000006829	-	63	94.949	ENSOCUG00000023761	-	85	94.949	Oryctolagus_cuniculus
ENSMAUG00000006829	-	57	95.402	ENSORLG00000012516	snrpd1	84	90.426	Oryzias_latipes
ENSMAUG00000006829	-	59	95.556	ENSORLG00020005743	snrpd1	82	90.722	Oryzias_latipes_hni
ENSMAUG00000006829	-	59	95.556	ENSORLG00015013402	snrpd1	82	90.722	Oryzias_latipes_hsok
ENSMAUG00000006829	-	59	95.556	ENSOMEG00000011571	snrpd1	82	90.722	Oryzias_melastigma
ENSMAUG00000006829	-	63	93.939	ENSOGAG00000007833	SNRPD1	83	93.939	Otolemur_garnettii
ENSMAUG00000006829	-	62	94.845	ENSOARG00000003413	-	73	94.845	Ovis_aries
ENSMAUG00000006829	-	62	94.845	ENSPPAG00000042593	SNRPD1	82	94.845	Pan_paniscus
ENSMAUG00000006829	-	59	66.667	ENSPPRG00000005009	-	76	63.918	Panthera_pardus
ENSMAUG00000006829	-	62	94.845	ENSPPRG00000002399	SNRPD1	82	94.845	Panthera_pardus
ENSMAUG00000006829	-	61	94.792	ENSPTIG00000013206	SNRPD1	84	94.792	Panthera_tigris_altaica
ENSMAUG00000006829	-	59	93.333	ENSPTRG00000050159	-	83	88.660	Pan_troglodytes
ENSMAUG00000006829	-	62	94.845	ENSPTRG00000009909	SNRPD1	82	94.845	Pan_troglodytes
ENSMAUG00000006829	-	62	94.845	ENSPANG00000023478	SNRPD1	82	94.845	Papio_anubis
ENSMAUG00000006829	-	57	95.402	ENSPKIG00000021610	snrpd1	84	90.426	Paramormyrops_kingsleyae
ENSMAUG00000006829	-	62	91.753	ENSPKIG00000003985	SNRPD1	82	91.753	Paramormyrops_kingsleyae
ENSMAUG00000006829	-	59	95.556	ENSPMGG00000001862	snrpd1	82	90.722	Periophthalmus_magnuspinnatus
ENSMAUG00000006829	-	65	95.050	ENSPEMG00000014773	-	82	95.050	Peromyscus_maniculatus_bairdii
ENSMAUG00000006829	-	59	82.796	ENSPMAG00000003938	-	83	78.218	Petromyzon_marinus
ENSMAUG00000006829	-	62	94.845	ENSPCIG00000020320	SNRPD1	84	94.681	Phascolarctos_cinereus
ENSMAUG00000006829	-	59	95.556	ENSPFOG00000012448	SNRPD1	86	90.722	Poecilia_formosa
ENSMAUG00000006829	-	59	95.556	ENSPLAG00000006738	snrpd1	86	90.722	Poecilia_latipinna
ENSMAUG00000006829	-	59	95.556	ENSPMEG00000021942	snrpd1	86	90.722	Poecilia_mexicana
ENSMAUG00000006829	-	59	95.556	ENSPREG00000007094	snrpd1	82	90.722	Poecilia_reticulata
ENSMAUG00000006829	-	62	94.845	ENSPPYG00000025874	SNRPD1	82	94.845	Pongo_abelii
ENSMAUG00000006829	-	62	94.845	ENSPCOG00000013327	SNRPD1	82	94.845	Propithecus_coquereli
ENSMAUG00000006829	-	62	94.845	ENSPVAG00000005511	SNRPD1	65	94.845	Pteropus_vampyrus
ENSMAUG00000006829	-	59	95.556	ENSPNAG00000017824	snrpd1	82	90.722	Pygocentrus_nattereri
ENSMAUG00000006829	-	62	94.845	ENSRNOG00000013714	Snrpd1	82	94.845	Rattus_norvegicus
ENSMAUG00000006829	-	63	93.939	ENSRBIG00000022996	SNRPD1	82	94.845	Rhinopithecus_bieti
ENSMAUG00000006829	-	63	93.939	ENSRROG00000027640	SNRPD1	82	94.845	Rhinopithecus_roxellana
ENSMAUG00000006829	-	62	94.845	ENSSBOG00000020998	SNRPD1	82	94.845	Saimiri_boliviensis_boliviensis
ENSMAUG00000006829	-	62	94.845	ENSSHAG00000011791	SNRPD1	82	94.845	Sarcophilus_harrisii
ENSMAUG00000006829	-	59	94.444	ENSSFOG00015008809	-	82	89.691	Scleropages_formosus
ENSMAUG00000006829	-	60	94.565	ENSSFOG00015022253	-	82	89.691	Scleropages_formosus
ENSMAUG00000006829	-	59	94.444	ENSSMAG00000008765	snrpd1	84	89.362	Scophthalmus_maximus
ENSMAUG00000006829	-	59	94.444	ENSSDUG00000010521	snrpd1	82	89.691	Seriola_dumerili
ENSMAUG00000006829	-	59	95.556	ENSSLDG00000011858	snrpd1	82	90.722	Seriola_lalandi_dorsalis
ENSMAUG00000006829	-	62	94.845	ENSSPUG00000002824	SNRPD1	82	94.845	Sphenodon_punctatus
ENSMAUG00000006829	-	57	95.402	ENSSPAG00000015229	snrpd1	84	90.426	Stegastes_partitus
ENSMAUG00000006829	-	62	94.845	ENSSSCG00000003701	SNRPD1	84	94.681	Sus_scrofa
ENSMAUG00000006829	-	65	93.069	ENSTGUG00000005095	SNRPD1	85	93.069	Taeniopygia_guttata
ENSMAUG00000006829	-	57	95.402	ENSTRUG00000008977	snrpd1	84	90.426	Takifugu_rubripes
ENSMAUG00000006829	-	51	89.744	ENSTNIG00000001224	snrpd1	82	84.706	Tetraodon_nigroviridis
ENSMAUG00000006829	-	62	94.845	ENSTTRG00000002654	SNRPD1	84	94.845	Tursiops_truncatus
ENSMAUG00000006829	-	61	98.936	ENSUAMG00000013431	SNRPD1	98	98.901	Ursus_americanus
ENSMAUG00000006829	-	62	94.845	ENSUMAG00000019740	SNRPD1	82	94.845	Ursus_maritimus
ENSMAUG00000006829	-	62	94.845	ENSVPAG00000010056	SNRPD1	65	94.845	Vicugna_pacos
ENSMAUG00000006829	-	60	94.681	ENSVVUG00000004009	SNRPD1	84	94.681	Vulpes_vulpes
ENSMAUG00000006829	-	62	92.784	ENSXETG00000027354	snrpd1	82	92.784	Xenopus_tropicalis
ENSMAUG00000006829	-	59	95.556	ENSXCOG00000020108	snrpd1	82	90.722	Xiphophorus_couchianus
ENSMAUG00000006829	-	59	95.556	ENSXMAG00000003368	snrpd1	82	90.722	Xiphophorus_maculatus