EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000007422 (Gene tree)
Gene ID: 101826216
Gene Symbol: A1cf
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 65197 bases
Position: chrKB708127.1:26750787-26815983
Accession: 101826216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000005395	DND1_DSRM	PF14709.7	2.6e-25	1	1
ENSMAUP00000005395	RRM_1	PF00076.22	8.1e-40	1	3
ENSMAUP00000005395	RRM_1	PF00076.22	8.1e-40	2	3
ENSMAUP00000005395	RRM_1	PF00076.22	8.1e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000008973	-	1910	XM_005063693	ENSMAUP00000005395	595 (aa)	XP_005063750	A0A1U7Q2Q7

Gene Model

Click here to download ENSMAUG00000007422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000007422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000007422	A1cf	76	55.532	ENSMAUG00000006493	Rbm47	89	65.957
ENSMAUG00000007422	A1cf	87	69.524	ENSMAUG00000009911	Rbm46	99	69.524
ENSMAUG00000007422	A1cf	51	52.941	ENSMAUG00000008038	Syncrip	76	46.447
ENSMAUG00000007422	A1cf	51	53.247	ENSMAUG00000013503	Hnrnpr	50	52.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000007422	A1cf	100	93.782	ENSG00000148584	A1CF	100	98.010	Homo_sapiens
ENSMAUG00000007422	A1cf	100	72.637	ENSAPOG00000008259	a1cf	100	72.471	Acanthochromis_polyacanthus
ENSMAUG00000007422	A1cf	100	92.269	ENSAMEG00000000523	A1CF	100	92.269	Ailuropoda_melanoleuca
ENSMAUG00000007422	A1cf	100	74.551	ENSACIG00000008632	a1cf	100	75.530	Amphilophus_citrinellus
ENSMAUG00000007422	A1cf	100	73.159	ENSAOCG00000023744	a1cf	93	84.431	Amphiprion_ocellaris
ENSMAUG00000007422	A1cf	100	74.141	ENSAPEG00000009537	a1cf	100	74.795	Amphiprion_percula
ENSMAUG00000007422	A1cf	100	75.081	ENSATEG00000013720	a1cf	100	76.059	Anabas_testudineus
ENSMAUG00000007422	A1cf	100	86.745	ENSAPLG00000002964	A1CF	100	86.242	Anas_platyrhynchos
ENSMAUG00000007422	A1cf	100	83.054	ENSACAG00000015269	A1CF	100	83.054	Anolis_carolinensis
ENSMAUG00000007422	A1cf	100	92.941	ENSANAG00000019974	A1CF	100	92.101	Aotus_nancymaae
ENSMAUG00000007422	A1cf	100	71.895	ENSACLG00000017428	a1cf	100	73.366	Astatotilapia_calliptera
ENSMAUG00000007422	A1cf	100	73.388	ENSAMXG00000018180	a1cf	100	73.223	Astyanax_mexicanus
ENSMAUG00000007422	A1cf	100	92.101	ENSBTAG00000021195	A1CF	100	92.491	Bos_taurus
ENSMAUG00000007422	A1cf	100	94.622	ENSCJAG00000005045	A1CF	100	93.782	Callithrix_jacchus
ENSMAUG00000007422	A1cf	100	91.765	ENSCAFG00000015581	A1CF	100	91.933	Canis_familiaris
ENSMAUG00000007422	A1cf	100	91.765	ENSCAFG00020026421	A1CF	100	91.933	Canis_lupus_dingo
ENSMAUG00000007422	A1cf	100	92.773	ENSCHIG00000020411	A1CF	100	92.773	Capra_hircus
ENSMAUG00000007422	A1cf	95	92.553	ENSTSYG00000001755	A1CF	100	91.459	Carlito_syrichta
ENSMAUG00000007422	A1cf	100	83.228	ENSCAPG00000017386	A1CF	100	83.228	Cavia_aperea
ENSMAUG00000007422	A1cf	100	93.782	ENSCPOG00000009807	A1CF	100	93.109	Cavia_porcellus
ENSMAUG00000007422	A1cf	100	94.286	ENSCCAG00000018168	A1CF	100	93.109	Cebus_capucinus
ENSMAUG00000007422	A1cf	100	92.605	ENSCATG00000043715	A1CF	100	92.101	Cercocebus_atys
ENSMAUG00000007422	A1cf	100	93.456	ENSCLAG00000010424	A1CF	100	93.456	Chinchilla_lanigera
ENSMAUG00000007422	A1cf	100	93.613	ENSCSAG00000007032	A1CF	100	93.109	Chlorocebus_sabaeus
ENSMAUG00000007422	A1cf	98	87.288	ENSCHOG00000009089	A1CF	98	87.288	Choloepus_hoffmanni
ENSMAUG00000007422	A1cf	100	86.074	ENSCPBG00000026464	A1CF	100	85.738	Chrysemys_picta_bellii
ENSMAUG00000007422	A1cf	100	93.613	ENSCANG00000038032	A1CF	100	93.109	Colobus_angolensis_palliatus
ENSMAUG00000007422	A1cf	100	98.151	ENSCGRG00001017413	A1cf	100	98.151	Cricetulus_griseus_chok1gshd
ENSMAUG00000007422	A1cf	100	97.311	ENSCGRG00000017332	A1cf	100	97.311	Cricetulus_griseus_crigri
ENSMAUG00000007422	A1cf	100	74.295	ENSCSEG00000002361	a1cf	100	75.788	Cynoglossus_semilaevis
ENSMAUG00000007422	A1cf	100	73.779	ENSCVAG00000010520	a1cf	100	75.081	Cyprinodon_variegatus
ENSMAUG00000007422	A1cf	100	77.205	ENSDARG00000002968	a1cf	100	78.203	Danio_rerio
ENSMAUG00000007422	A1cf	100	91.597	ENSDNOG00000002829	A1CF	100	91.597	Dasypus_novemcinctus
ENSMAUG00000007422	A1cf	81	91.667	ENSETEG00000012527	A1CF	81	91.667	Echinops_telfairi
ENSMAUG00000007422	A1cf	100	94.305	ENSEASG00005012924	A1CF	100	94.305	Equus_asinus_asinus
ENSMAUG00000007422	A1cf	100	93.802	ENSECAG00000010424	A1CF	100	93.802	Equus_caballus
ENSMAUG00000007422	A1cf	78	78.801	ENSEEUG00000000013	A1CF	99	76.605	Erinaceus_europaeus
ENSMAUG00000007422	A1cf	100	78.037	ENSELUG00000003159	a1cf	100	78.702	Esox_lucius
ENSMAUG00000007422	A1cf	100	89.580	ENSFCAG00000011179	A1CF	100	89.748	Felis_catus
ENSMAUG00000007422	A1cf	100	84.564	ENSFALG00000013183	A1CF	100	84.228	Ficedula_albicollis
ENSMAUG00000007422	A1cf	100	91.429	ENSFDAG00000019371	A1CF	100	91.429	Fukomys_damarensis
ENSMAUG00000007422	A1cf	100	69.055	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSMAUG00000007422	A1cf	100	71.452	ENSGMOG00000018943	a1cf	100	71.452	Gadus_morhua
ENSMAUG00000007422	A1cf	95	85.664	ENSGALG00000003765	A1CF	97	85.310	Gallus_gallus
ENSMAUG00000007422	A1cf	100	69.344	ENSGAFG00000014868	a1cf	100	70.164	Gambusia_affinis
ENSMAUG00000007422	A1cf	100	73.191	ENSGACG00000010241	a1cf	100	73.684	Gasterosteus_aculeatus
ENSMAUG00000007422	A1cf	94	85.968	ENSGAGG00000016508	A1CF	97	85.613	Gopherus_agassizii
ENSMAUG00000007422	A1cf	100	93.950	ENSGGOG00000009670	A1CF	100	93.613	Gorilla_gorilla
ENSMAUG00000007422	A1cf	100	73.409	ENSHBUG00000021959	a1cf	100	75.041	Haplochromis_burtoni
ENSMAUG00000007422	A1cf	100	93.445	ENSHGLG00000008955	A1CF	100	93.445	Heterocephalus_glaber_female
ENSMAUG00000007422	A1cf	100	92.773	ENSHGLG00100000518	A1CF	100	92.773	Heterocephalus_glaber_male
ENSMAUG00000007422	A1cf	100	69.218	ENSHCOG00000017669	a1cf	100	71.870	Hippocampus_comes
ENSMAUG00000007422	A1cf	89	82.123	ENSIPUG00000010367	a1cf	95	82.364	Ictalurus_punctatus
ENSMAUG00000007422	A1cf	100	76.098	ENSKMAG00000006568	a1cf	100	76.585	Kryptolebias_marmoratus
ENSMAUG00000007422	A1cf	99	74.384	ENSLBEG00000020994	a1cf	98	75.534	Labrus_bergylta
ENSMAUG00000007422	A1cf	100	80.801	ENSLACG00000008061	A1CF	100	80.301	Latimeria_chalumnae
ENSMAUG00000007422	A1cf	100	80.667	ENSLOCG00000006302	a1cf	100	80.500	Lepisosteus_oculatus
ENSMAUG00000007422	A1cf	100	92.773	ENSLAFG00000015462	A1CF	100	92.773	Loxodonta_africana
ENSMAUG00000007422	A1cf	100	92.605	ENSMFAG00000035948	A1CF	100	92.101	Macaca_fascicularis
ENSMAUG00000007422	A1cf	100	92.605	ENSMMUG00000007077	A1CF	100	92.101	Macaca_mulatta
ENSMAUG00000007422	A1cf	100	92.605	ENSMNEG00000031454	A1CF	100	92.101	Macaca_nemestrina
ENSMAUG00000007422	A1cf	100	93.950	ENSMLEG00000037223	A1CF	100	93.445	Mandrillus_leucophaeus
ENSMAUG00000007422	A1cf	100	72.013	ENSMAMG00000010402	a1cf	100	73.693	Mastacembelus_armatus
ENSMAUG00000007422	A1cf	100	75.167	ENSMZEG00005013245	a1cf	100	75.500	Maylandia_zebra
ENSMAUG00000007422	A1cf	100	85.930	ENSMGAG00000001507	A1CF	100	85.595	Meleagris_gallopavo
ENSMAUG00000007422	A1cf	100	91.137	ENSMICG00000003377	A1CF	100	91.137	Microcebus_murinus
ENSMAUG00000007422	A1cf	100	95.966	ENSMOCG00000021536	A1cf	100	95.966	Microtus_ochrogaster
ENSMAUG00000007422	A1cf	100	65.794	ENSMMOG00000009422	a1cf	100	67.267	Mola_mola
ENSMAUG00000007422	A1cf	92	87.569	ENSMODG00000016478	A1CF	97	89.205	Monodelphis_domestica
ENSMAUG00000007422	A1cf	100	71.500	ENSMALG00000012992	a1cf	100	71.000	Monopterus_albus
ENSMAUG00000007422	A1cf	100	95.294	MGP_CAROLIEiJ_G0022873	A1cf	100	95.294	Mus_caroli
ENSMAUG00000007422	A1cf	100	95.294	ENSMUSG00000052595	A1cf	99	96.579	Mus_musculus
ENSMAUG00000007422	A1cf	100	94.286	MGP_PahariEiJ_G0014366	A1cf	100	94.286	Mus_pahari
ENSMAUG00000007422	A1cf	100	94.958	MGP_SPRETEiJ_G0023792	A1cf	100	94.958	Mus_spretus
ENSMAUG00000007422	A1cf	100	86.723	ENSMPUG00000016971	A1CF	100	86.723	Mustela_putorius_furo
ENSMAUG00000007422	A1cf	100	92.941	ENSMLUG00000016071	A1CF	100	92.941	Myotis_lucifugus
ENSMAUG00000007422	A1cf	100	95.126	ENSNGAG00000015136	A1cf	100	95.126	Nannospalax_galili
ENSMAUG00000007422	A1cf	100	74.062	ENSNBRG00000001712	a1cf	100	75.693	Neolamprologus_brichardi
ENSMAUG00000007422	A1cf	100	94.454	ENSNLEG00000012028	A1CF	100	94.454	Nomascus_leucogenys
ENSMAUG00000007422	A1cf	94	85.613	ENSMEUG00000015909	A1CF	100	85.435	Notamacropus_eugenii
ENSMAUG00000007422	A1cf	88	83.048	ENSOPRG00000010667	A1CF	97	82.922	Ochotona_princeps
ENSMAUG00000007422	A1cf	100	74.062	ENSONIG00000019105	a1cf	100	74.878	Oreochromis_niloticus
ENSMAUG00000007422	A1cf	78	86.510	ENSOANG00000007360	A1CF	99	86.510	Ornithorhynchus_anatinus
ENSMAUG00000007422	A1cf	100	91.275	ENSOCUG00000011587	A1CF	100	91.443	Oryctolagus_cuniculus
ENSMAUG00000007422	A1cf	100	72.712	ENSORLG00000013342	a1cf	100	72.330	Oryzias_latipes
ENSMAUG00000007422	A1cf	100	73.899	ENSORLG00020000586	a1cf	100	73.899	Oryzias_latipes_hni
ENSMAUG00000007422	A1cf	100	73.736	ENSORLG00015018569	a1cf	100	73.736	Oryzias_latipes_hsok
ENSMAUG00000007422	A1cf	100	72.340	ENSOMEG00000013531	a1cf	100	72.340	Oryzias_melastigma
ENSMAUG00000007422	A1cf	100	91.933	ENSOGAG00000012884	A1CF	100	91.933	Otolemur_garnettii
ENSMAUG00000007422	A1cf	100	93.109	ENSOARG00000013695	A1CF	100	93.109	Ovis_aries
ENSMAUG00000007422	A1cf	97	91.854	ENSPPAG00000028115	A1CF	100	95.547	Pan_paniscus
ENSMAUG00000007422	A1cf	100	91.261	ENSPPRG00000012180	A1CF	100	91.429	Panthera_pardus
ENSMAUG00000007422	A1cf	100	91.261	ENSPTIG00000021223	A1CF	100	91.429	Panthera_tigris_altaica
ENSMAUG00000007422	A1cf	100	93.782	ENSPTRG00000002508	A1CF	100	93.445	Pan_troglodytes
ENSMAUG00000007422	A1cf	100	92.605	ENSPANG00000021988	A1CF	100	92.101	Papio_anubis
ENSMAUG00000007422	A1cf	100	79.368	ENSPKIG00000025176	a1cf	100	79.035	Paramormyrops_kingsleyae
ENSMAUG00000007422	A1cf	100	85.067	ENSPSIG00000010318	A1CF	100	84.732	Pelodiscus_sinensis
ENSMAUG00000007422	A1cf	88	70.857	ENSPMGG00000013359	a1cf	99	66.893	Periophthalmus_magnuspinnatus
ENSMAUG00000007422	A1cf	100	96.807	ENSPEMG00000015021	A1cf	100	96.807	Peromyscus_maniculatus_bairdii
ENSMAUG00000007422	A1cf	100	85.738	ENSPCIG00000002175	A1CF	100	85.570	Phascolarctos_cinereus
ENSMAUG00000007422	A1cf	100	75.244	ENSPFOG00000006683	a1cf	100	76.384	Poecilia_formosa
ENSMAUG00000007422	A1cf	100	75.081	ENSPFOG00000007437	-	100	76.221	Poecilia_formosa
ENSMAUG00000007422	A1cf	100	73.941	ENSPLAG00000000026	a1cf	100	75.081	Poecilia_latipinna
ENSMAUG00000007422	A1cf	100	73.941	ENSPLAG00000001210	-	100	75.081	Poecilia_latipinna
ENSMAUG00000007422	A1cf	100	67.810	ENSPMEG00000015529	-	100	68.954	Poecilia_mexicana
ENSMAUG00000007422	A1cf	100	66.667	ENSPMEG00000000921	a1cf	100	67.810	Poecilia_mexicana
ENSMAUG00000007422	A1cf	100	75.244	ENSPREG00000016298	a1cf	100	76.221	Poecilia_reticulata
ENSMAUG00000007422	A1cf	100	92.941	ENSPPYG00000002819	A1CF	100	92.941	Pongo_abelii
ENSMAUG00000007422	A1cf	79	71.036	ENSPCAG00000006463	A1CF	79	71.036	Procavia_capensis
ENSMAUG00000007422	A1cf	100	93.121	ENSPCOG00000024172	A1CF	100	93.121	Propithecus_coquereli
ENSMAUG00000007422	A1cf	100	74.715	ENSPNYG00000017944	a1cf	100	76.346	Pundamilia_nyererei
ENSMAUG00000007422	A1cf	100	78.808	ENSPNAG00000007704	a1cf	100	78.477	Pygocentrus_nattereri
ENSMAUG00000007422	A1cf	100	94.454	ENSRNOG00000033195	A1cf	100	94.454	Rattus_norvegicus
ENSMAUG00000007422	A1cf	100	87.270	ENSRBIG00000042892	A1CF	100	89.824	Rhinopithecus_bieti
ENSMAUG00000007422	A1cf	100	93.950	ENSRROG00000041398	A1CF	100	93.445	Rhinopithecus_roxellana
ENSMAUG00000007422	A1cf	100	94.286	ENSSBOG00000021930	A1CF	100	94.286	Saimiri_boliviensis_boliviensis
ENSMAUG00000007422	A1cf	100	87.416	ENSSHAG00000005096	A1CF	100	87.248	Sarcophilus_harrisii
ENSMAUG00000007422	A1cf	100	77.612	ENSSFOG00015011774	a1cf	100	77.778	Scleropages_formosus
ENSMAUG00000007422	A1cf	100	74.430	ENSSMAG00000013271	a1cf	100	74.756	Scophthalmus_maximus
ENSMAUG00000007422	A1cf	100	75.456	ENSSDUG00000013930	a1cf	100	76.285	Seriola_dumerili
ENSMAUG00000007422	A1cf	100	68.482	ENSSLDG00000004290	a1cf	100	69.307	Seriola_lalandi_dorsalis
ENSMAUG00000007422	A1cf	95	81.449	ENSSARG00000005940	A1CF	96	81.449	Sorex_araneus
ENSMAUG00000007422	A1cf	95	86.116	ENSSPUG00000006797	A1CF	95	85.589	Sphenodon_punctatus
ENSMAUG00000007422	A1cf	100	93.613	ENSSSCG00000010431	A1CF	100	93.613	Sus_scrofa
ENSMAUG00000007422	A1cf	100	86.144	ENSTGUG00000005090	A1CF	100	85.786	Taeniopygia_guttata
ENSMAUG00000007422	A1cf	100	73.409	ENSTRUG00000001982	a1cf	100	73.246	Takifugu_rubripes
ENSMAUG00000007422	A1cf	100	73.984	ENSTNIG00000003580	a1cf	100	73.659	Tetraodon_nigroviridis
ENSMAUG00000007422	A1cf	97	84.749	ENSTTRG00000013190	A1CF	95	84.749	Tursiops_truncatus
ENSMAUG00000007422	A1cf	100	91.092	ENSUAMG00000020065	A1CF	100	90.924	Ursus_americanus
ENSMAUG00000007422	A1cf	100	92.101	ENSUMAG00000011162	A1CF	100	91.933	Ursus_maritimus
ENSMAUG00000007422	A1cf	87	87.140	ENSVPAG00000006130	A1CF	86	87.140	Vicugna_pacos
ENSMAUG00000007422	A1cf	100	90.756	ENSVVUG00000002504	A1CF	100	90.756	Vulpes_vulpes
ENSMAUG00000007422	A1cf	100	77.000	ENSXETG00000006611	a1cf	100	77.000	Xenopus_tropicalis
ENSMAUG00000007422	A1cf	100	75.410	ENSXCOG00000003302	a1cf	100	76.066	Xiphophorus_couchianus
ENSMAUG00000007422	A1cf	100	76.557	ENSXMAG00000016703	a1cf	100	77.213	Xiphophorus_maculatus