EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000007832 (Gene tree)
Gene ID: 101832207
Gene Symbol: Usb1
Alias: USB1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 14479 bases
Position: chrKB708211.1:1165283-1179761
Accession: 101832207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000005728	HVSL	PF09749.9	1.4e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000009470	-	1139	XM_005078635	ENSMAUP00000005728	267 (aa)	XP_005078692	A0A1U7QTA9

Gene Model

Click here to download ENSMAUG00000007832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000007832's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000007832	Usb1	100	84.270	ENSG00000103005	USB1	100	87.850	Homo_sapiens
ENSMAUG00000007832	Usb1	98	47.670	ENSAPOG00000011942	usb1	99	47.670	Acanthochromis_polyacanthus
ENSMAUG00000007832	Usb1	100	81.413	ENSAMEG00000017205	USB1	100	81.413	Ailuropoda_melanoleuca
ENSMAUG00000007832	Usb1	84	55.357	ENSACIG00000012234	usb1	99	51.481	Amphilophus_citrinellus
ENSMAUG00000007832	Usb1	85	54.185	ENSAOCG00000014831	usb1	99	49.466	Amphiprion_ocellaris
ENSMAUG00000007832	Usb1	85	54.626	ENSAPEG00000000296	usb1	99	49.822	Amphiprion_percula
ENSMAUG00000007832	Usb1	95	50.198	ENSATEG00000009348	usb1	99	49.286	Anabas_testudineus
ENSMAUG00000007832	Usb1	84	68.722	ENSAPLG00000002756	USB1	100	69.163	Anas_platyrhynchos
ENSMAUG00000007832	Usb1	85	63.755	ENSACAG00000015481	USB1	100	63.755	Anolis_carolinensis
ENSMAUG00000007832	Usb1	100	84.644	ENSANAG00000035640	USB1	100	84.644	Aotus_nancymaae
ENSMAUG00000007832	Usb1	84	53.571	ENSACLG00000020586	usb1	99	48.399	Astatotilapia_calliptera
ENSMAUG00000007832	Usb1	87	51.082	ENSAMXG00000040146	usb1	95	46.021	Astyanax_mexicanus
ENSMAUG00000007832	Usb1	100	81.648	ENSBTAG00000015758	USB1	100	81.648	Bos_taurus
ENSMAUG00000007832	Usb1	100	85.019	ENSCJAG00000011733	USB1	100	85.019	Callithrix_jacchus
ENSMAUG00000007832	Usb1	99	79.044	ENSCAFG00000008556	USB1	73	79.412	Canis_familiaris
ENSMAUG00000007832	Usb1	99	80.224	ENSCAFG00020009263	USB1	99	80.224	Canis_lupus_dingo
ENSMAUG00000007832	Usb1	100	80.524	ENSCHIG00000024290	USB1	100	80.524	Capra_hircus
ENSMAUG00000007832	Usb1	100	83.895	ENSTSYG00000006997	USB1	100	83.895	Carlito_syrichta
ENSMAUG00000007832	Usb1	87	69.397	ENSCAPG00000009057	USB1	100	69.397	Cavia_aperea
ENSMAUG00000007832	Usb1	100	80.224	ENSCPOG00000014325	USB1	100	80.224	Cavia_porcellus
ENSMAUG00000007832	Usb1	100	85.393	ENSCCAG00000022132	USB1	100	85.393	Cebus_capucinus
ENSMAUG00000007832	Usb1	100	83.895	ENSCATG00000032174	USB1	100	84.644	Cercocebus_atys
ENSMAUG00000007832	Usb1	66	85.227	ENSCLAG00000007363	USB1	100	85.227	Chinchilla_lanigera
ENSMAUG00000007832	Usb1	100	84.270	ENSCSAG00000004783	USB1	100	85.019	Chlorocebus_sabaeus
ENSMAUG00000007832	Usb1	100	60.072	ENSCPBG00000026943	USB1	100	63.082	Chrysemys_picta_bellii
ENSMAUG00000007832	Usb1	100	82.772	ENSCANG00000037135	USB1	100	83.521	Colobus_angolensis_palliatus
ENSMAUG00000007832	Usb1	100	93.284	ENSCGRG00001011243	USB1	100	93.284	Cricetulus_griseus_chok1gshd
ENSMAUG00000007832	Usb1	100	93.284	ENSCGRG00000013252	USB1	100	93.284	Cricetulus_griseus_crigri
ENSMAUG00000007832	Usb1	98	48.364	ENSCSEG00000013881	usb1	99	48.364	Cynoglossus_semilaevis
ENSMAUG00000007832	Usb1	84	49.565	ENSCVAG00000009252	usb1	97	50.000	Cyprinodon_variegatus
ENSMAUG00000007832	Usb1	90	50.628	ENSDARG00000003841	usb1	99	47.636	Danio_rerio
ENSMAUG00000007832	Usb1	100	84.270	ENSDORG00000001888	Usb1	100	84.270	Dipodomys_ordii
ENSMAUG00000007832	Usb1	76	39.806	FBgn0037713	CG16790	97	35.316	Drosophila_melanogaster
ENSMAUG00000007832	Usb1	100	67.041	ENSETEG00000019682	USB1	100	67.041	Echinops_telfairi
ENSMAUG00000007832	Usb1	83	48.198	ENSEBUG00000005889	usb1	78	48.198	Eptatretus_burgeri
ENSMAUG00000007832	Usb1	100	82.772	ENSEASG00005005484	USB1	100	82.772	Equus_asinus_asinus
ENSMAUG00000007832	Usb1	100	82.772	ENSECAG00000019493	USB1	91	82.772	Equus_caballus
ENSMAUG00000007832	Usb1	66	79.545	ENSEEUG00000000154	USB1	100	61.049	Erinaceus_europaeus
ENSMAUG00000007832	Usb1	93	47.600	ENSELUG00000010974	usb1	99	46.237	Esox_lucius
ENSMAUG00000007832	Usb1	100	82.772	ENSFCAG00000002693	USB1	100	82.772	Felis_catus
ENSMAUG00000007832	Usb1	100	60.674	ENSFALG00000006876	USB1	99	60.674	Ficedula_albicollis
ENSMAUG00000007832	Usb1	100	81.273	ENSFDAG00000010052	USB1	100	81.273	Fukomys_damarensis
ENSMAUG00000007832	Usb1	85	48.780	ENSFHEG00000012334	usb1	96	48.374	Fundulus_heteroclitus
ENSMAUG00000007832	Usb1	84	52.018	ENSGMOG00000004228	usb1	99	52.018	Gadus_morhua
ENSMAUG00000007832	Usb1	84	66.071	ENSGALG00000035604	USB1	100	62.313	Gallus_gallus
ENSMAUG00000007832	Usb1	98	49.455	ENSGAFG00000021890	usb1	99	49.455	Gambusia_affinis
ENSMAUG00000007832	Usb1	84	51.339	ENSGACG00000003257	usb1	99	48.375	Gasterosteus_aculeatus
ENSMAUG00000007832	Usb1	100	64.234	ENSGAGG00000022572	USB1	100	64.234	Gopherus_agassizii
ENSMAUG00000007832	Usb1	100	84.644	ENSGGOG00000017147	USB1	100	84.644	Gorilla_gorilla
ENSMAUG00000007832	Usb1	85	54.185	ENSHBUG00000009823	usb1	99	49.462	Haplochromis_burtoni
ENSMAUG00000007832	Usb1	100	82.397	ENSHGLG00000016078	USB1	98	82.397	Heterocephalus_glaber_female
ENSMAUG00000007832	Usb1	100	82.397	ENSHGLG00100005562	USB1	98	82.397	Heterocephalus_glaber_male
ENSMAUG00000007832	Usb1	81	54.839	ENSHCOG00000015633	usb1	99	50.575	Hippocampus_comes
ENSMAUG00000007832	Usb1	98	47.917	ENSIPUG00000008601	usb1	99	47.917	Ictalurus_punctatus
ENSMAUG00000007832	Usb1	100	82.051	ENSSTOG00000007548	USB1	100	82.051	Ictidomys_tridecemlineatus
ENSMAUG00000007832	Usb1	100	87.640	ENSJJAG00000021859	Usb1	100	87.640	Jaculus_jaculus
ENSMAUG00000007832	Usb1	85	51.982	ENSKMAG00000007200	usb1	99	46.786	Kryptolebias_marmoratus
ENSMAUG00000007832	Usb1	74	52.525	ENSLBEG00000008452	usb1	82	45.679	Labrus_bergylta
ENSMAUG00000007832	Usb1	87	54.472	ENSLACG00000000105	USB1	91	53.962	Latimeria_chalumnae
ENSMAUG00000007832	Usb1	96	52.490	ENSLOCG00000000465	usb1	99	51.246	Lepisosteus_oculatus
ENSMAUG00000007832	Usb1	100	65.556	ENSLAFG00000002267	USB1	100	65.926	Loxodonta_africana
ENSMAUG00000007832	Usb1	100	84.270	ENSMFAG00000003926	USB1	100	85.019	Macaca_fascicularis
ENSMAUG00000007832	Usb1	100	84.270	ENSMMUG00000022669	USB1	100	85.019	Macaca_mulatta
ENSMAUG00000007832	Usb1	100	83.895	ENSMNEG00000042487	USB1	100	84.644	Macaca_nemestrina
ENSMAUG00000007832	Usb1	100	84.270	ENSMLEG00000028756	USB1	100	85.019	Mandrillus_leucophaeus
ENSMAUG00000007832	Usb1	98	50.000	ENSMAMG00000015092	usb1	99	50.000	Mastacembelus_armatus
ENSMAUG00000007832	Usb1	84	53.571	ENSMZEG00005010008	usb1	99	48.746	Maylandia_zebra
ENSMAUG00000007832	Usb1	100	83.521	ENSMICG00000004900	USB1	100	84.270	Microcebus_murinus
ENSMAUG00000007832	Usb1	100	90.637	ENSMOCG00000022647	Usb1	100	90.637	Microtus_ochrogaster
ENSMAUG00000007832	Usb1	86	50.655	ENSMMOG00000000490	usb1	99	49.237	Mola_mola
ENSMAUG00000007832	Usb1	100	64.576	ENSMODG00000014067	USB1	100	67.159	Monodelphis_domestica
ENSMAUG00000007832	Usb1	95	48.221	ENSMALG00000005930	usb1	99	47.331	Monopterus_albus
ENSMAUG00000007832	Usb1	100	87.266	MGP_CAROLIEiJ_G0031421	Usb1	100	87.611	Mus_caroli
ENSMAUG00000007832	Usb1	100	87.266	ENSMUSG00000031792	Usb1	100	88.496	Mus_musculus
ENSMAUG00000007832	Usb1	100	87.266	MGP_PahariEiJ_G0023019	Usb1	100	88.034	Mus_pahari
ENSMAUG00000007832	Usb1	100	87.266	MGP_SPRETEiJ_G0032540	Usb1	100	87.266	Mus_spretus
ENSMAUG00000007832	Usb1	100	79.554	ENSMPUG00000004684	USB1	96	79.926	Mustela_putorius_furo
ENSMAUG00000007832	Usb1	87	84.848	ENSMLUG00000007400	USB1	100	84.848	Myotis_lucifugus
ENSMAUG00000007832	Usb1	100	86.617	ENSNGAG00000009703	Usb1	100	86.617	Nannospalax_galili
ENSMAUG00000007832	Usb1	87	48.707	ENSNBRG00000008747	usb1	99	53.271	Neolamprologus_brichardi
ENSMAUG00000007832	Usb1	94	83.730	ENSNLEG00000003340	USB1	100	83.730	Nomascus_leucogenys
ENSMAUG00000007832	Usb1	57	60.131	ENSMEUG00000003328	-	100	61.438	Notamacropus_eugenii
ENSMAUG00000007832	Usb1	63	94.118	ENSOPRG00000011803	USB1	72	94.118	Ochotona_princeps
ENSMAUG00000007832	Usb1	100	80.899	ENSODEG00000016214	USB1	100	80.899	Octodon_degus
ENSMAUG00000007832	Usb1	98	50.179	ENSONIG00000011063	usb1	99	50.179	Oreochromis_niloticus
ENSMAUG00000007832	Usb1	84	71.111	ENSOANG00000012118	USB1	94	71.111	Ornithorhynchus_anatinus
ENSMAUG00000007832	Usb1	84	51.339	ENSORLG00000012479	usb1	99	47.794	Oryzias_latipes
ENSMAUG00000007832	Usb1	84	51.339	ENSORLG00020018671	usb1	99	47.059	Oryzias_latipes_hni
ENSMAUG00000007832	Usb1	84	51.339	ENSORLG00015009679	usb1	99	47.426	Oryzias_latipes_hsok
ENSMAUG00000007832	Usb1	84	51.339	ENSOMEG00000012930	usb1	99	47.273	Oryzias_melastigma
ENSMAUG00000007832	Usb1	100	77.528	ENSOGAG00000003273	USB1	100	77.528	Otolemur_garnettii
ENSMAUG00000007832	Usb1	92	80.488	ENSOARG00000001107	USB1	94	80.488	Ovis_aries
ENSMAUG00000007832	Usb1	100	85.019	ENSPPAG00000042137	USB1	100	85.019	Pan_paniscus
ENSMAUG00000007832	Usb1	100	82.397	ENSPPRG00000024797	USB1	100	82.397	Panthera_pardus
ENSMAUG00000007832	Usb1	100	82.397	ENSPTIG00000007506	USB1	100	82.397	Panthera_tigris_altaica
ENSMAUG00000007832	Usb1	100	77.528	ENSPTRG00000008172	USB1	100	88.318	Pan_troglodytes
ENSMAUG00000007832	Usb1	100	84.270	ENSPANG00000025138	USB1	100	85.019	Papio_anubis
ENSMAUG00000007832	Usb1	96	50.193	ENSPKIG00000015109	usb1	99	46.441	Paramormyrops_kingsleyae
ENSMAUG00000007832	Usb1	84	50.222	ENSPSIG00000004305	USB1	100	50.222	Pelodiscus_sinensis
ENSMAUG00000007832	Usb1	84	52.018	ENSPMGG00000017725	usb1	98	49.042	Periophthalmus_magnuspinnatus
ENSMAUG00000007832	Usb1	100	90.441	ENSPEMG00000016183	Usb1	100	90.441	Peromyscus_maniculatus_bairdii
ENSMAUG00000007832	Usb1	91	48.374	ENSPMAG00000000462	usb1	99	48.374	Petromyzon_marinus
ENSMAUG00000007832	Usb1	98	48.913	ENSPFOG00000011130	usb1	99	48.913	Poecilia_formosa
ENSMAUG00000007832	Usb1	98	48.551	ENSPLAG00000009820	usb1	99	48.551	Poecilia_latipinna
ENSMAUG00000007832	Usb1	98	49.275	ENSPMEG00000006402	usb1	99	49.275	Poecilia_mexicana
ENSMAUG00000007832	Usb1	85	50.000	ENSPREG00000001047	usb1	98	50.000	Poecilia_reticulata
ENSMAUG00000007832	Usb1	95	80.315	ENSPPYG00000007401	USB1	100	80.315	Pongo_abelii
ENSMAUG00000007832	Usb1	100	83.895	ENSPCOG00000022612	USB1	100	83.895	Propithecus_coquereli
ENSMAUG00000007832	Usb1	100	78.277	ENSPVAG00000004613	USB1	100	78.277	Pteropus_vampyrus
ENSMAUG00000007832	Usb1	85	54.185	ENSPNYG00000022262	usb1	99	49.462	Pundamilia_nyererei
ENSMAUG00000007832	Usb1	90	49.791	ENSPNAG00000011736	usb1	99	45.392	Pygocentrus_nattereri
ENSMAUG00000007832	Usb1	100	88.764	ENSRNOG00000013216	Usb1	100	88.764	Rattus_norvegicus
ENSMAUG00000007832	Usb1	100	77.528	ENSRBIG00000044466	USB1	100	89.252	Rhinopithecus_bieti
ENSMAUG00000007832	Usb1	100	83.895	ENSRROG00000029211	USB1	100	84.644	Rhinopithecus_roxellana
ENSMAUG00000007832	Usb1	100	84.270	ENSSBOG00000029362	USB1	100	84.270	Saimiri_boliviensis_boliviensis
ENSMAUG00000007832	Usb1	82	71.233	ENSSHAG00000006993	USB1	100	66.797	Sarcophilus_harrisii
ENSMAUG00000007832	Usb1	87	57.143	ENSSFOG00015023663	usb1	91	50.000	Scleropages_formosus
ENSMAUG00000007832	Usb1	98	47.959	ENSSMAG00000015834	usb1	99	47.959	Scophthalmus_maximus
ENSMAUG00000007832	Usb1	84	54.464	ENSSDUG00000002949	usb1	99	50.000	Seriola_dumerili
ENSMAUG00000007832	Usb1	84	54.464	ENSSLDG00000014174	usb1	99	48.746	Seriola_lalandi_dorsalis
ENSMAUG00000007832	Usb1	80	67.757	ENSSPUG00000006741	USB1	100	67.757	Sphenodon_punctatus
ENSMAUG00000007832	Usb1	98	45.936	ENSSPAG00000007484	usb1	99	48.410	Stegastes_partitus
ENSMAUG00000007832	Usb1	100	82.156	ENSSSCG00000002807	USB1	100	82.156	Sus_scrofa
ENSMAUG00000007832	Usb1	78	69.856	ENSTGUG00000004792	USB1	99	61.798	Taeniopygia_guttata
ENSMAUG00000007832	Usb1	98	46.840	ENSTRUG00000021069	usb1	99	46.840	Takifugu_rubripes
ENSMAUG00000007832	Usb1	98	45.420	ENSTNIG00000000626	usb1	98	45.420	Tetraodon_nigroviridis
ENSMAUG00000007832	Usb1	87	59.914	ENSTBEG00000001507	USB1	100	59.914	Tupaia_belangeri
ENSMAUG00000007832	Usb1	57	87.500	ENSTTRG00000008429	-	57	87.500	Tursiops_truncatus
ENSMAUG00000007832	Usb1	100	81.041	ENSUAMG00000016823	USB1	100	81.041	Ursus_americanus
ENSMAUG00000007832	Usb1	80	84.579	ENSUMAG00000021369	USB1	100	84.579	Ursus_maritimus
ENSMAUG00000007832	Usb1	77	57.767	ENSVPAG00000009834	-	100	57.767	Vicugna_pacos
ENSMAUG00000007832	Usb1	99	80.597	ENSVVUG00000023700	USB1	95	80.408	Vulpes_vulpes
ENSMAUG00000007832	Usb1	81	57.339	ENSXETG00000013795	usb1	94	55.508	Xenopus_tropicalis
ENSMAUG00000007832	Usb1	85	53.070	ENSXMAG00000024687	usb1	80	49.799	Xiphophorus_maculatus