EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000007879 (Gene tree)
Gene ID: 101831041
Gene Symbol: -
Alias: -
Full Name: la-related protein 1B
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 32536 bases
Position: chrKB708146.1:7547628-7580163
Accession: 101831041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000005820	La	PF05383.17	1.4e-22	1	1
ENSMAUP00000005826	La	PF05383.17	2.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000009587	-	867	-	ENSMAUP00000005826	288 (aa)	-	UPI0003596722
ENSMAUT00000009579	-	1008	-	ENSMAUP00000005820	335 (aa)	XP_021082555	UPI000359F860
ENSMAUT00000009565	-	2023	XM_013113109	ENSMAUP00000005808	14 (aa)	XP_012968563	UPI000620A999

Gene Model

Click here to download ENSMAUG00000007879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000007879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000007879	-	100	88.657	ENSG00000138709	LARP1B	100	88.657	Homo_sapiens
ENSMAUG00000007879	-	100	90.448	ENSAMEG00000002748	LARP1B	100	90.448	Ailuropoda_melanoleuca
ENSMAUG00000007879	-	99	76.970	ENSANAG00000034618	LARP1B	96	76.970	Aotus_nancymaae
ENSMAUG00000007879	-	98	87.576	ENSBTAG00000012135	LARP1B	63	87.576	Bos_taurus
ENSMAUG00000007879	-	100	90.746	ENSCJAG00000003338	LARP1B	100	90.746	Callithrix_jacchus
ENSMAUG00000007879	-	100	90.625	ENSCAFG00020018899	LARP1B	100	90.625	Canis_lupus_dingo
ENSMAUG00000007879	-	100	87.889	ENSCHIG00000023144	LARP1B	100	87.889	Capra_hircus
ENSMAUG00000007879	-	99	86.760	ENSTSYG00000002037	-	99	86.760	Carlito_syrichta
ENSMAUG00000007879	-	76	93.750	ENSCPOG00000034668	-	93	93.750	Cavia_porcellus
ENSMAUG00000007879	-	99	90.120	ENSCCAG00000021948	LARP1B	99	90.120	Cebus_capucinus
ENSMAUG00000007879	-	100	86.269	ENSCATG00000013541	LARP1B	100	86.269	Cercocebus_atys
ENSMAUG00000007879	-	100	85.764	ENSCLAG00000006448	-	100	85.764	Chinchilla_lanigera
ENSMAUG00000007879	-	100	89.931	ENSCANG00000026958	LARP1B	100	89.931	Colobus_angolensis_palliatus
ENSMAUG00000007879	-	100	99.104	ENSCGRG00001004660	-	100	99.104	Cricetulus_griseus_chok1gshd
ENSMAUG00000007879	-	100	98.806	ENSCGRG00000001914	-	100	98.806	Cricetulus_griseus_crigri
ENSMAUG00000007879	-	98	89.666	ENSDNOG00000018765	-	64	89.666	Dasypus_novemcinctus
ENSMAUG00000007879	-	99	91.289	ENSEASG00005018106	LARP1B	99	91.289	Equus_asinus_asinus
ENSMAUG00000007879	-	100	90.149	ENSFCAG00000014650	-	100	90.149	Felis_catus
ENSMAUG00000007879	-	100	88.657	ENSGGOG00000015900	LARP1B	100	88.657	Gorilla_gorilla
ENSMAUG00000007879	-	100	85.959	ENSHGLG00000006728	-	99	85.959	Heterocephalus_glaber_female
ENSMAUG00000007879	-	98	74.164	ENSHGLG00000013922	-	96	73.860	Heterocephalus_glaber_female
ENSMAUG00000007879	-	100	86.806	ENSHGLG00100014041	-	96	85.970	Heterocephalus_glaber_male
ENSMAUG00000007879	-	98	74.164	ENSHGLG00100016491	-	96	73.860	Heterocephalus_glaber_male
ENSMAUG00000007879	-	90	75.290	ENSSTOG00000033183	-	97	74.900	Ictidomys_tridecemlineatus
ENSMAUG00000007879	-	100	89.273	ENSSTOG00000008596	-	100	89.273	Ictidomys_tridecemlineatus
ENSMAUG00000007879	-	96	71.340	ENSSTOG00000034510	-	87	71.340	Ictidomys_tridecemlineatus
ENSMAUG00000007879	-	99	79.154	ENSSTOG00000021917	-	94	80.060	Ictidomys_tridecemlineatus
ENSMAUG00000007879	-	99	90.592	ENSJJAG00000022360	Larp1b	99	90.592	Jaculus_jaculus
ENSMAUG00000007879	-	98	71.299	ENSLACG00000015247	LARP1B	85	69.277	Latimeria_chalumnae
ENSMAUG00000007879	-	99	91.369	ENSLAFG00000008473	-	99	91.369	Loxodonta_africana
ENSMAUG00000007879	-	100	89.851	ENSMFAG00000002218	LARP1B	100	89.851	Macaca_fascicularis
ENSMAUG00000007879	-	100	65.278	ENSMFAG00000003306	-	93	85.517	Macaca_fascicularis
ENSMAUG00000007879	-	100	89.851	ENSMMUG00000021347	LARP1B	100	89.851	Macaca_mulatta
ENSMAUG00000007879	-	75	86.713	ENSMNEG00000027747	-	89	86.713	Macaca_nemestrina
ENSMAUG00000007879	-	84	54.959	ENSMZEG00005002545	larp1b	54	54.444	Maylandia_zebra
ENSMAUG00000007879	-	100	92.239	ENSMICG00000036111	LARP1B	100	92.239	Microcebus_murinus
ENSMAUG00000007879	-	97	68.405	ENSMICG00000028052	-	63	68.405	Microcebus_murinus
ENSMAUG00000007879	-	98	81.818	ENSMICG00000037883	-	88	81.818	Microcebus_murinus
ENSMAUG00000007879	-	79	97.338	ENSMOCG00000001490	Larp1b	95	97.338	Microtus_ochrogaster
ENSMAUG00000007879	-	100	94.925	MGP_CAROLIEiJ_G0024962	Larp1b	100	94.925	Mus_caroli
ENSMAUG00000007879	-	100	95.821	ENSMUSG00000025762	Larp1b	100	95.821	Mus_musculus
ENSMAUG00000007879	-	100	95.522	MGP_PahariEiJ_G0026403	Larp1b	100	95.522	Mus_pahari
ENSMAUG00000007879	-	100	95.821	MGP_SPRETEiJ_G0025897	Larp1b	100	95.821	Mus_spretus
ENSMAUG00000007879	-	100	88.955	ENSNLEG00000013819	LARP1B	100	88.955	Nomascus_leucogenys
ENSMAUG00000007879	-	100	85.764	ENSODEG00000001292	-	100	85.764	Octodon_degus
ENSMAUG00000007879	-	100	88.358	ENSPPAG00000030439	LARP1B	100	88.358	Pan_paniscus
ENSMAUG00000007879	-	100	90.149	ENSPPRG00000002743	-	100	90.149	Panthera_pardus
ENSMAUG00000007879	-	100	90.149	ENSPTIG00000011225	LARP1B	100	90.149	Panthera_tigris_altaica
ENSMAUG00000007879	-	100	88.657	ENSPTRG00000016437	LARP1B	100	88.657	Pan_troglodytes
ENSMAUG00000007879	-	100	89.552	ENSPANG00000012488	LARP1B	100	89.552	Papio_anubis
ENSMAUG00000007879	-	99	84.776	ENSPCIG00000026516	LARP1B	87	85.455	Phascolarctos_cinereus
ENSMAUG00000007879	-	99	51.226	ENSPFOG00000022837	-	52	50.954	Poecilia_formosa
ENSMAUG00000007879	-	79	60.088	ENSPREG00000005955	-	89	55.282	Poecilia_reticulata
ENSMAUG00000007879	-	100	91.343	ENSPCOG00000021874	LARP1B	100	91.343	Propithecus_coquereli
ENSMAUG00000007879	-	100	96.716	ENSRNOG00000038366	Larp1b	100	96.716	Rattus_norvegicus
ENSMAUG00000007879	-	100	87.463	ENSRBIG00000039982	-	100	86.866	Rhinopithecus_bieti
ENSMAUG00000007879	-	100	80.299	ENSRBIG00000038568	-	92	80.299	Rhinopithecus_bieti
ENSMAUG00000007879	-	100	89.851	ENSRROG00000030771	LARP1B	100	89.851	Rhinopithecus_roxellana
ENSMAUG00000007879	-	100	81.661	ENSRROG00000038525	-	96	81.661	Rhinopithecus_roxellana
ENSMAUG00000007879	-	99	54.007	ENSSSCG00000040491	-	99	77.778	Sus_scrofa
ENSMAUG00000007879	-	98	88.754	ENSSSCG00000034280	LARP1B	63	88.754	Sus_scrofa
ENSMAUG00000007879	-	100	79.701	ENSUAMG00000016938	-	91	92.899	Ursus_americanus
ENSMAUG00000007879	-	98	89.666	ENSVVUG00000011307	LARP1B	65	89.666	Vulpes_vulpes