EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000007996 (Gene tree)
Gene ID: 101823192
Gene Symbol: Swt1
Alias: 1200016B10Rik
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 70604 bases
Position: chrKB708154.1:501382-571985
Accession: 101823192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000005925	PIN_4	PF13638.6	6.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000009703	-	2604	XM_013114272	ENSMAUP00000005925	867 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000007996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000007996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000007996	Swt1	97	66.519	ENSG00000116668	SWT1	99	66.519	Homo_sapiens
ENSMAUG00000007996	Swt1	57	32.155	ENSAPOG00000014897	-	58	31.979	Acanthochromis_polyacanthus
ENSMAUG00000007996	Swt1	97	64.895	ENSAMEG00000013585	SWT1	100	65.155	Ailuropoda_melanoleuca
ENSMAUG00000007996	Swt1	57	31.625	ENSAOCG00000013932	swt1	58	31.625	Amphiprion_ocellaris
ENSMAUG00000007996	Swt1	57	31.979	ENSAPEG00000009613	-	58	31.979	Amphiprion_percula
ENSMAUG00000007996	Swt1	58	33.216	ENSATEG00000018946	swt1	58	33.216	Anabas_testudineus
ENSMAUG00000007996	Swt1	64	48.259	ENSAPLG00000008607	SWT1	82	48.259	Anas_platyrhynchos
ENSMAUG00000007996	Swt1	61	42.069	ENSACAG00000002276	SWT1	67	42.069	Anolis_carolinensis
ENSMAUG00000007996	Swt1	97	65.304	ENSANAG00000027068	SWT1	99	65.673	Aotus_nancymaae
ENSMAUG00000007996	Swt1	61	36.189	ENSAMXG00000010971	swt1	69	34.789	Astyanax_mexicanus
ENSMAUG00000007996	Swt1	74	64.670	ENSBTAG00000004492	SWT1	99	68.834	Bos_taurus
ENSMAUG00000007996	Swt1	97	65.011	ENSCJAG00000005544	SWT1	100	65.380	Callithrix_jacchus
ENSMAUG00000007996	Swt1	98	65.965	ENSCAFG00000013543	SWT1	98	66.297	Canis_familiaris
ENSMAUG00000007996	Swt1	97	65.093	ENSCAFG00020015648	SWT1	99	66.667	Canis_lupus_dingo
ENSMAUG00000007996	Swt1	93	65.541	ENSCHIG00000023511	SWT1	100	71.743	Capra_hircus
ENSMAUG00000007996	Swt1	97	67.439	ENSTSYG00000010470	SWT1	100	67.439	Carlito_syrichta
ENSMAUG00000007996	Swt1	93	68.225	ENSCPOG00000014251	SWT1	99	67.587	Cavia_porcellus
ENSMAUG00000007996	Swt1	97	66.188	ENSCCAG00000033926	SWT1	99	66.777	Cebus_capucinus
ENSMAUG00000007996	Swt1	97	65.639	ENSCATG00000042210	SWT1	99	71.550	Cercocebus_atys
ENSMAUG00000007996	Swt1	96	66.592	ENSCLAG00000013959	SWT1	99	66.105	Chinchilla_lanigera
ENSMAUG00000007996	Swt1	97	65.529	ENSCSAG00000012895	SWT1	99	66.007	Chlorocebus_sabaeus
ENSMAUG00000007996	Swt1	63	50.252	ENSCPBG00000015691	SWT1	67	50.244	Chrysemys_picta_bellii
ENSMAUG00000007996	Swt1	97	65.414	ENSCANG00000032207	SWT1	99	71.575	Colobus_angolensis_palliatus
ENSMAUG00000007996	Swt1	100	86.587	ENSCGRG00001022955	Swt1	100	86.587	Cricetulus_griseus_chok1gshd
ENSMAUG00000007996	Swt1	100	86.587	ENSCGRG00000010224	Swt1	100	86.816	Cricetulus_griseus_crigri
ENSMAUG00000007996	Swt1	58	32.241	ENSCSEG00000017352	swt1	75	32.586	Cynoglossus_semilaevis
ENSMAUG00000007996	Swt1	71	32.500	ENSDARG00000094010	swt1	69	32.647	Danio_rerio
ENSMAUG00000007996	Swt1	90	62.379	ENSDNOG00000005254	SWT1	100	63.350	Dasypus_novemcinctus
ENSMAUG00000007996	Swt1	97	63.626	ENSDORG00000010531	Swt1	100	63.404	Dipodomys_ordii
ENSMAUG00000007996	Swt1	89	64.512	ENSEASG00005005530	SWT1	98	64.442	Equus_asinus_asinus
ENSMAUG00000007996	Swt1	89	65.588	ENSECAG00000012085	SWT1	99	65.588	Equus_caballus
ENSMAUG00000007996	Swt1	85	60.920	ENSEEUG00000003664	SWT1	88	60.920	Erinaceus_europaeus
ENSMAUG00000007996	Swt1	59	34.664	ENSELUG00000020565	swt1	57	34.828	Esox_lucius
ENSMAUG00000007996	Swt1	97	66.630	ENSFCAG00000011286	SWT1	100	66.519	Felis_catus
ENSMAUG00000007996	Swt1	61	46.875	ENSFALG00000003206	SWT1	67	46.875	Ficedula_albicollis
ENSMAUG00000007996	Swt1	97	66.481	ENSFDAG00000007569	SWT1	100	65.998	Fukomys_damarensis
ENSMAUG00000007996	Swt1	59	47.561	ENSGALG00000034230	SWT1	65	47.909	Gallus_gallus
ENSMAUG00000007996	Swt1	70	30.769	ENSGAFG00000007803	-	68	30.769	Gambusia_affinis
ENSMAUG00000007996	Swt1	77	47.632	ENSGAGG00000025050	SWT1	99	55.080	Gopherus_agassizii
ENSMAUG00000007996	Swt1	55	70.644	ENSGGOG00000041167	-	95	70.992	Gorilla_gorilla
ENSMAUG00000007996	Swt1	58	30.915	ENSHBUG00000006188	swt1	68	30.329	Haplochromis_burtoni
ENSMAUG00000007996	Swt1	96	65.502	ENSHGLG00000006542	SWT1	99	64.898	Heterocephalus_glaber_female
ENSMAUG00000007996	Swt1	96	67.117	ENSHGLG00100014408	SWT1	99	66.253	Heterocephalus_glaber_male
ENSMAUG00000007996	Swt1	71	31.579	ENSIPUG00000009113	-	69	31.579	Ictalurus_punctatus
ENSMAUG00000007996	Swt1	97	66.815	ENSSTOG00000010356	SWT1	100	66.556	Ictidomys_tridecemlineatus
ENSMAUG00000007996	Swt1	97	64.477	ENSJJAG00000015927	Swt1	100	64.477	Jaculus_jaculus
ENSMAUG00000007996	Swt1	58	32.812	ENSKMAG00000012533	swt1	59	32.812	Kryptolebias_marmoratus
ENSMAUG00000007996	Swt1	57	33.810	ENSLBEG00000020663	-	57	33.810	Labrus_bergylta
ENSMAUG00000007996	Swt1	73	42.008	ENSLACG00000009194	SWT1	99	42.008	Latimeria_chalumnae
ENSMAUG00000007996	Swt1	64	37.397	ENSLOCG00000001749	swt1	93	39.880	Lepisosteus_oculatus
ENSMAUG00000007996	Swt1	62	73.129	ENSLAFG00000004346	-	100	73.129	Loxodonta_africana
ENSMAUG00000007996	Swt1	97	65.639	ENSMFAG00000031793	SWT1	99	71.624	Macaca_fascicularis
ENSMAUG00000007996	Swt1	97	63.428	ENSMMUG00000013882	SWT1	99	68.557	Macaca_mulatta
ENSMAUG00000007996	Swt1	97	65.749	ENSMNEG00000035502	SWT1	99	71.624	Macaca_nemestrina
ENSMAUG00000007996	Swt1	97	65.967	ENSMLEG00000038692	SWT1	99	71.550	Mandrillus_leucophaeus
ENSMAUG00000007996	Swt1	58	30.503	ENSMZEG00005018489	swt1	68	30.329	Maylandia_zebra
ENSMAUG00000007996	Swt1	61	46.026	ENSMGAG00000000973	SWT1	100	46.026	Meleagris_gallopavo
ENSMAUG00000007996	Swt1	97	68.102	ENSMICG00000014975	SWT1	100	68.102	Microcebus_murinus
ENSMAUG00000007996	Swt1	100	79.716	ENSMOCG00000009776	Swt1	100	79.716	Microtus_ochrogaster
ENSMAUG00000007996	Swt1	97	53.094	ENSMODG00000007472	SWT1	99	52.226	Monodelphis_domestica
ENSMAUG00000007996	Swt1	58	35.189	ENSMALG00000019308	swt1	58	35.189	Monopterus_albus
ENSMAUG00000007996	Swt1	99	73.472	MGP_CAROLIEiJ_G0014692	Swt1	100	90.395	Mus_caroli
ENSMAUG00000007996	Swt1	99	73.472	ENSMUSG00000052748	Swt1	99	88.136	Mus_musculus
ENSMAUG00000007996	Swt1	100	74.891	MGP_PahariEiJ_G0027928	Swt1	100	92.655	Mus_pahari
ENSMAUG00000007996	Swt1	99	73.908	MGP_SPRETEiJ_G0015499	Swt1	100	90.395	Mus_spretus
ENSMAUG00000007996	Swt1	97	64.530	ENSMPUG00000011913	SWT1	100	64.790	Mustela_putorius_furo
ENSMAUG00000007996	Swt1	98	64.128	ENSMLUG00000001142	SWT1	99	64.128	Myotis_lucifugus
ENSMAUG00000007996	Swt1	100	73.232	ENSNGAG00000021080	Swt1	100	73.094	Nannospalax_galili
ENSMAUG00000007996	Swt1	97	66.261	ENSNLEG00000018031	SWT1	99	66.150	Nomascus_leucogenys
ENSMAUG00000007996	Swt1	87	63.359	ENSMEUG00000000236	-	87	63.359	Notamacropus_eugenii
ENSMAUG00000007996	Swt1	86	53.318	ENSOPRG00000000692	SWT1	88	53.318	Ochotona_princeps
ENSMAUG00000007996	Swt1	57	32.702	ENSONIG00000009994	swt1	70	40.206	Oreochromis_niloticus
ENSMAUG00000007996	Swt1	73	55.043	ENSOANG00000001013	-	87	55.043	Ornithorhynchus_anatinus
ENSMAUG00000007996	Swt1	97	58.472	ENSOCUG00000004901	SWT1	99	59.025	Oryctolagus_cuniculus
ENSMAUG00000007996	Swt1	60	31.466	ENSORLG00000009682	swt1	62	31.466	Oryzias_latipes
ENSMAUG00000007996	Swt1	60	31.631	ENSORLG00020011654	swt1	62	31.631	Oryzias_latipes_hni
ENSMAUG00000007996	Swt1	60	31.301	ENSORLG00015007734	swt1	63	31.301	Oryzias_latipes_hsok
ENSMAUG00000007996	Swt1	59	32.818	ENSOMEG00000006607	swt1	59	32.818	Oryzias_melastigma
ENSMAUG00000007996	Swt1	97	66.262	ENSOGAG00000016195	SWT1	100	66.262	Otolemur_garnettii
ENSMAUG00000007996	Swt1	98	65.965	ENSOARG00000004156	SWT1	98	65.965	Ovis_aries
ENSMAUG00000007996	Swt1	97	66.630	ENSPPAG00000021400	SWT1	99	66.630	Pan_paniscus
ENSMAUG00000007996	Swt1	97	66.261	ENSPPRG00000023754	SWT1	100	66.740	Panthera_pardus
ENSMAUG00000007996	Swt1	97	66.372	ENSPTIG00000021889	SWT1	100	66.851	Panthera_tigris_altaica
ENSMAUG00000007996	Swt1	97	66.409	ENSPTRG00000001777	SWT1	99	66.409	Pan_troglodytes
ENSMAUG00000007996	Swt1	97	65.050	ENSPANG00000005099	SWT1	99	70.869	Papio_anubis
ENSMAUG00000007996	Swt1	60	34.186	ENSPKIG00000005979	swt1	57	34.186	Paramormyrops_kingsleyae
ENSMAUG00000007996	Swt1	61	51.453	ENSPSIG00000008961	SWT1	64	51.453	Pelodiscus_sinensis
ENSMAUG00000007996	Swt1	100	80.589	ENSPEMG00000008208	Swt1	100	80.589	Peromyscus_maniculatus_bairdii
ENSMAUG00000007996	Swt1	97	77.273	ENSPCIG00000002443	SWT1	92	77.273	Phascolarctos_cinereus
ENSMAUG00000007996	Swt1	59	31.197	ENSPFOG00000010988	-	69	32.027	Poecilia_formosa
ENSMAUG00000007996	Swt1	59	30.457	ENSPLAG00000022908	-	60	30.457	Poecilia_latipinna
ENSMAUG00000007996	Swt1	59	31.197	ENSPMEG00000006943	-	60	31.197	Poecilia_mexicana
ENSMAUG00000007996	Swt1	97	65.635	ENSPPYG00000000415	SWT1	99	66.115	Pongo_abelii
ENSMAUG00000007996	Swt1	93	64.341	ENSPCAG00000008337	SWT1	93	64.341	Procavia_capensis
ENSMAUG00000007996	Swt1	66	82.418	ENSPCOG00000018195	-	93	82.418	Propithecus_coquereli
ENSMAUG00000007996	Swt1	76	66.106	ENSPVAG00000005968	SWT1	79	66.291	Pteropus_vampyrus
ENSMAUG00000007996	Swt1	58	30.503	ENSPNYG00000012934	swt1	68	30.329	Pundamilia_nyererei
ENSMAUG00000007996	Swt1	72	33.480	ENSPNAG00000017795	swt1	70	33.480	Pygocentrus_nattereri
ENSMAUG00000007996	Swt1	100	75.082	ENSRNOG00000032258	Swt1	100	75.843	Rattus_norvegicus
ENSMAUG00000007996	Swt1	97	63.204	ENSRBIG00000040630	SWT1	99	69.178	Rhinopithecus_bieti
ENSMAUG00000007996	Swt1	69	69.444	ENSRROG00000028596	SWT1	100	68.553	Rhinopithecus_roxellana
ENSMAUG00000007996	Swt1	97	66.262	ENSSBOG00000028825	SWT1	99	66.262	Saimiri_boliviensis_boliviensis
ENSMAUG00000007996	Swt1	97	52.268	ENSSHAG00000009241	SWT1	100	52.038	Sarcophilus_harrisii
ENSMAUG00000007996	Swt1	59	36.804	ENSSFOG00015004895	swt1	57	36.804	Scleropages_formosus
ENSMAUG00000007996	Swt1	57	32.570	ENSSDUG00000012345	swt1	58	32.509	Seriola_dumerili
ENSMAUG00000007996	Swt1	57	32.394	ENSSLDG00000003821	swt1	58	32.332	Seriola_lalandi_dorsalis
ENSMAUG00000007996	Swt1	91	39.462	ENSSPUG00000003899	SWT1	96	39.462	Sphenodon_punctatus
ENSMAUG00000007996	Swt1	58	31.046	ENSSPAG00000001030	swt1	59	30.532	Stegastes_partitus
ENSMAUG00000007996	Swt1	92	68.735	ENSSSCG00000015569	SWT1	100	67.687	Sus_scrofa
ENSMAUG00000007996	Swt1	58	48.485	ENSTGUG00000003718	-	100	48.485	Taeniopygia_guttata
ENSMAUG00000007996	Swt1	58	31.532	ENSTRUG00000006420	swt1	61	31.532	Takifugu_rubripes
ENSMAUG00000007996	Swt1	52	85.484	ENSTBEG00000016891	-	54	85.484	Tupaia_belangeri
ENSMAUG00000007996	Swt1	97	63.907	ENSTTRG00000005914	SWT1	100	63.907	Tursiops_truncatus
ENSMAUG00000007996	Swt1	97	64.673	ENSUAMG00000020937	SWT1	99	67.191	Ursus_americanus
ENSMAUG00000007996	Swt1	97	65.338	ENSUMAG00000021918	SWT1	100	65.929	Ursus_maritimus
ENSMAUG00000007996	Swt1	89	68.171	ENSVPAG00000011855	SWT1	92	68.171	Vicugna_pacos
ENSMAUG00000007996	Swt1	97	65.819	ENSVVUG00000009182	SWT1	100	66.150	Vulpes_vulpes
ENSMAUG00000007996	Swt1	70	30.657	ENSXMAG00000023472	-	69	30.592	Xiphophorus_maculatus