EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000008025 (Gene tree)
Gene ID: 101839677
Gene Symbol: Parn
Alias: 1200003I18Rik|DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 156707 bases
Position: chrKB708247.1:6348725-6505431
Accession: 101839677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000005978	R3H	PF01424.22	1.6e-06	1	1
ENSMAUP00000005978	RNA_bind	PF08675.11	1.3e-33	1	1
ENSMAUP00000005978	CAF1	PF04857.20	3.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000009762	-	1839	XM_013121972	ENSMAUP00000005978	612 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000008025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000008025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000008025	Parn	52	30.769	ENSMAUG00000012298	Pnldc1	68	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000008025	Parn	100	80.556	ENSG00000140694	PARN	95	94.286	Homo_sapiens
ENSMAUG00000008025	Parn	100	79.231	ENSAMEG00000011208	PARN	100	79.231	Ailuropoda_melanoleuca
ENSMAUG00000008025	Parn	84	68.624	ENSACIG00000000619	parn	83	68.624	Amphilophus_citrinellus
ENSMAUG00000008025	Parn	91	67.692	ENSAOCG00000003465	parn	83	67.692	Amphiprion_ocellaris
ENSMAUG00000008025	Parn	78	72.840	ENSAPEG00000010661	parn	91	72.840	Amphiprion_percula
ENSMAUG00000008025	Parn	99	63.859	ENSATEG00000004661	parn	92	63.859	Anabas_testudineus
ENSMAUG00000008025	Parn	99	73.988	ENSAPLG00000013914	PARN	99	73.988	Anas_platyrhynchos
ENSMAUG00000008025	Parn	91	73.649	ENSACAG00000004973	PARN	100	69.985	Anolis_carolinensis
ENSMAUG00000008025	Parn	100	79.077	ENSANAG00000031516	PARN	95	94.286	Aotus_nancymaae
ENSMAUG00000008025	Parn	91	69.165	ENSACLG00000004742	parn	84	69.165	Astatotilapia_calliptera
ENSMAUG00000008025	Parn	89	67.888	ENSAMXG00000012390	parn	87	68.704	Astyanax_mexicanus
ENSMAUG00000008025	Parn	100	77.895	ENSBTAG00000018097	PARN	100	81.463	Bos_taurus
ENSMAUG00000008025	Parn	100	79.692	ENSCJAG00000015866	PARN	95	94.286	Callithrix_jacchus
ENSMAUG00000008025	Parn	100	78.428	ENSCAFG00000018795	PARN	100	78.428	Canis_familiaris
ENSMAUG00000008025	Parn	100	78.737	ENSCAFG00020024126	PARN	100	78.737	Canis_lupus_dingo
ENSMAUG00000008025	Parn	100	79.507	ENSCHIG00000018143	PARN	100	79.507	Capra_hircus
ENSMAUG00000008025	Parn	73	58.678	ENSCAPG00000007984	PARN	78	58.678	Cavia_aperea
ENSMAUG00000008025	Parn	100	78.858	ENSCPOG00000002263	PARN	100	78.858	Cavia_porcellus
ENSMAUG00000008025	Parn	100	79.784	ENSCCAG00000030367	PARN	95	94.286	Cebus_capucinus
ENSMAUG00000008025	Parn	100	74.571	ENSCATG00000041368	PARN	95	94.286	Cercocebus_atys
ENSMAUG00000008025	Parn	100	79.321	ENSCLAG00000015406	PARN	99	79.321	Chinchilla_lanigera
ENSMAUG00000008025	Parn	100	80.710	ENSCSAG00000008142	PARN	100	80.710	Chlorocebus_sabaeus
ENSMAUG00000008025	Parn	99	63.125	ENSCHOG00000007014	PARN	100	63.125	Choloepus_hoffmanni
ENSMAUG00000008025	Parn	92	78.179	ENSCPBG00000006609	PARN	99	77.835	Chrysemys_picta_bellii
ENSMAUG00000008025	Parn	81	40.892	ENSCING00000010142	-	99	40.892	Ciona_intestinalis
ENSMAUG00000008025	Parn	100	70.270	ENSCANG00000028849	-	95	94.286	Colobus_angolensis_palliatus
ENSMAUG00000008025	Parn	100	90.063	ENSCGRG00001012096	Parn	100	90.063	Cricetulus_griseus_chok1gshd
ENSMAUG00000008025	Parn	100	90.063	ENSCGRG00000004939	Parn	100	90.063	Cricetulus_griseus_crigri
ENSMAUG00000008025	Parn	90	66.093	ENSCSEG00000002064	parn	100	52.941	Cynoglossus_semilaevis
ENSMAUG00000008025	Parn	90	67.065	ENSCVAG00000014848	parn	83	67.065	Cyprinodon_variegatus
ENSMAUG00000008025	Parn	89	65.858	ENSDARG00000102634	parn	96	62.105	Danio_rerio
ENSMAUG00000008025	Parn	100	79.753	ENSDNOG00000000833	PARN	100	79.753	Dasypus_novemcinctus
ENSMAUG00000008025	Parn	72	77.947	ENSETEG00000014828	-	69	77.947	Echinops_telfairi
ENSMAUG00000008025	Parn	100	79.969	ENSEASG00005011400	PARN	100	79.969	Equus_asinus_asinus
ENSMAUG00000008025	Parn	100	80.123	ENSECAG00000017792	PARN	100	80.123	Equus_caballus
ENSMAUG00000008025	Parn	82	66.516	ENSEEUG00000010370	PARN	84	66.516	Erinaceus_europaeus
ENSMAUG00000008025	Parn	89	66.205	ENSELUG00000013139	parn	74	66.205	Esox_lucius
ENSMAUG00000008025	Parn	100	79.199	ENSFCAG00000044961	PARN	95	91.429	Felis_catus
ENSMAUG00000008025	Parn	99	73.594	ENSFALG00000003911	PARN	98	73.594	Ficedula_albicollis
ENSMAUG00000008025	Parn	100	79.475	ENSFDAG00000009234	PARN	100	79.475	Fukomys_damarensis
ENSMAUG00000008025	Parn	91	60.906	ENSFHEG00000013738	parn	88	60.906	Fundulus_heteroclitus
ENSMAUG00000008025	Parn	84	68.750	ENSGMOG00000003231	parn	97	68.750	Gadus_morhua
ENSMAUG00000008025	Parn	100	72.798	ENSGALG00000003091	PARN	100	72.798	Gallus_gallus
ENSMAUG00000008025	Parn	90	67.123	ENSGAFG00000011061	parn	83	66.893	Gambusia_affinis
ENSMAUG00000008025	Parn	100	64.043	ENSGACG00000019501	parn	100	64.043	Gasterosteus_aculeatus
ENSMAUG00000008025	Parn	54	75.224	ENSGAGG00000023281	PARN	83	75.224	Gopherus_agassizii
ENSMAUG00000008025	Parn	97	81.111	ENSGGOG00000025224	PARN	95	94.286	Gorilla_gorilla
ENSMAUG00000008025	Parn	100	62.384	ENSHBUG00000017906	parn	100	63.003	Haplochromis_burtoni
ENSMAUG00000008025	Parn	100	79.321	ENSHGLG00000010886	PARN	100	79.321	Heterocephalus_glaber_female
ENSMAUG00000008025	Parn	100	79.321	ENSHGLG00100014659	PARN	100	79.321	Heterocephalus_glaber_male
ENSMAUG00000008025	Parn	83	65.799	ENSHCOG00000008683	parn	91	65.799	Hippocampus_comes
ENSMAUG00000008025	Parn	100	51.343	ENSIPUG00000012401	parn	79	58.672	Ictalurus_punctatus
ENSMAUG00000008025	Parn	100	80.062	ENSSTOG00000007519	PARN	100	80.062	Ictidomys_tridecemlineatus
ENSMAUG00000008025	Parn	100	80.781	ENSJJAG00000023049	Parn	100	80.781	Jaculus_jaculus
ENSMAUG00000008025	Parn	91	67.912	ENSKMAG00000009462	parn	83	67.912	Kryptolebias_marmoratus
ENSMAUG00000008025	Parn	91	67.918	ENSLBEG00000009167	parn	89	67.918	Labrus_bergylta
ENSMAUG00000008025	Parn	79	72.353	ENSLACG00000004207	PARN	100	69.515	Latimeria_chalumnae
ENSMAUG00000008025	Parn	92	68.814	ENSLOCG00000000715	parn	85	68.814	Lepisosteus_oculatus
ENSMAUG00000008025	Parn	100	79.844	ENSLAFG00000015036	PARN	100	79.844	Loxodonta_africana
ENSMAUG00000008025	Parn	100	77.812	ENSMFAG00000044852	PARN	95	94.286	Macaca_fascicularis
ENSMAUG00000008025	Parn	100	80.401	ENSMMUG00000018849	PARN	95	94.286	Macaca_mulatta
ENSMAUG00000008025	Parn	100	80.556	ENSMNEG00000045108	PARN	95	94.286	Macaca_nemestrina
ENSMAUG00000008025	Parn	100	80.710	ENSMLEG00000031743	PARN	95	94.286	Mandrillus_leucophaeus
ENSMAUG00000008025	Parn	90	67.797	ENSMAMG00000006939	parn	82	67.797	Mastacembelus_armatus
ENSMAUG00000008025	Parn	100	62.946	ENSMZEG00005013590	parn	100	62.791	Maylandia_zebra
ENSMAUG00000008025	Parn	94	75.382	ENSMGAG00000001004	PARN	91	75.382	Meleagris_gallopavo
ENSMAUG00000008025	Parn	100	80.989	ENSMICG00000016053	PARN	95	94.286	Microcebus_murinus
ENSMAUG00000008025	Parn	78	88.710	ENSMOCG00000022211	Parn	100	88.710	Microtus_ochrogaster
ENSMAUG00000008025	Parn	100	61.025	ENSMMOG00000011333	parn	100	60.870	Mola_mola
ENSMAUG00000008025	Parn	78	82.178	ENSMODG00000004915	PARN	99	82.178	Monodelphis_domestica
ENSMAUG00000008025	Parn	84	71.062	ENSMALG00000019426	parn	91	71.062	Monopterus_albus
ENSMAUG00000008025	Parn	100	86.572	MGP_CAROLIEiJ_G0020466	Parn	100	86.572	Mus_caroli
ENSMAUG00000008025	Parn	100	86.888	ENSMUSG00000022685	Parn	100	86.888	Mus_musculus
ENSMAUG00000008025	Parn	100	86.256	MGP_PahariEiJ_G0016172	Parn	100	86.256	Mus_pahari
ENSMAUG00000008025	Parn	100	86.730	MGP_SPRETEiJ_G0021361	Parn	100	86.730	Mus_spretus
ENSMAUG00000008025	Parn	100	79.598	ENSMPUG00000014464	PARN	100	79.598	Mustela_putorius_furo
ENSMAUG00000008025	Parn	77	81.312	ENSMLUG00000005414	PARN	100	81.312	Myotis_lucifugus
ENSMAUG00000008025	Parn	100	61.957	ENSNBRG00000006805	parn	100	61.957	Neolamprologus_brichardi
ENSMAUG00000008025	Parn	100	80.247	ENSNLEG00000010241	PARN	95	94.286	Nomascus_leucogenys
ENSMAUG00000008025	Parn	91	59.091	ENSMEUG00000008178	-	91	59.091	Notamacropus_eugenii
ENSMAUG00000008025	Parn	99	75.312	ENSOPRG00000012187	PARN	100	75.312	Ochotona_princeps
ENSMAUG00000008025	Parn	100	75.000	ENSODEG00000001617	PARN	100	75.000	Octodon_degus
ENSMAUG00000008025	Parn	100	64.177	ENSONIG00000000151	parn	100	64.188	Oreochromis_niloticus
ENSMAUG00000008025	Parn	62	74.425	ENSOANG00000020155	-	97	74.936	Ornithorhynchus_anatinus
ENSMAUG00000008025	Parn	99	78.882	ENSOCUG00000000322	PARN	100	78.882	Oryctolagus_cuniculus
ENSMAUG00000008025	Parn	91	66.837	ENSORLG00020010313	parn	85	67.233	Oryzias_latipes_hni
ENSMAUG00000008025	Parn	91	66.327	ENSORLG00015000300	parn	85	66.723	Oryzias_latipes_hsok
ENSMAUG00000008025	Parn	100	58.874	ENSOMEG00000019555	parn	97	55.455	Oryzias_melastigma
ENSMAUG00000008025	Parn	77	81.800	ENSOGAG00000014626	PARN	100	81.800	Otolemur_garnettii
ENSMAUG00000008025	Parn	77	83.499	ENSOARG00000007574	PARN	100	83.499	Ovis_aries
ENSMAUG00000008025	Parn	100	80.247	ENSPPAG00000031438	PARN	95	94.286	Pan_paniscus
ENSMAUG00000008025	Parn	100	79.045	ENSPPRG00000018583	PARN	95	91.429	Panthera_pardus
ENSMAUG00000008025	Parn	100	79.045	ENSPTIG00000012135	PARN	95	91.429	Panthera_tigris_altaica
ENSMAUG00000008025	Parn	100	80.154	ENSPTRG00000007792	PARN	95	94.286	Pan_troglodytes
ENSMAUG00000008025	Parn	100	77.469	ENSPANG00000020099	PARN	95	94.286	Papio_anubis
ENSMAUG00000008025	Parn	91	68.034	ENSPKIG00000022807	parn	91	63.514	Paramormyrops_kingsleyae
ENSMAUG00000008025	Parn	99	74.375	ENSPSIG00000014804	PARN	100	76.621	Pelodiscus_sinensis
ENSMAUG00000008025	Parn	81	71.456	ENSPMGG00000014431	parn	76	68.327	Periophthalmus_magnuspinnatus
ENSMAUG00000008025	Parn	100	85.782	ENSPEMG00000018439	Parn	100	85.782	Peromyscus_maniculatus_bairdii
ENSMAUG00000008025	Parn	82	61.787	ENSPMAG00000003956	parn	99	61.787	Petromyzon_marinus
ENSMAUG00000008025	Parn	66	73.380	ENSPCIG00000001259	PARN	92	73.148	Phascolarctos_cinereus
ENSMAUG00000008025	Parn	90	67.526	ENSPFOG00000012823	parn	83	67.291	Poecilia_formosa
ENSMAUG00000008025	Parn	90	67.698	ENSPLAG00000006395	parn	83	67.462	Poecilia_latipinna
ENSMAUG00000008025	Parn	90	67.698	ENSPMEG00000007711	parn	83	67.462	Poecilia_mexicana
ENSMAUG00000008025	Parn	90	67.526	ENSPREG00000000147	parn	83	67.291	Poecilia_reticulata
ENSMAUG00000008025	Parn	100	79.908	ENSPPYG00000007123	PARN	100	80.000	Pongo_abelii
ENSMAUG00000008025	Parn	94	70.798	ENSPCAG00000001741	PARN	96	70.798	Procavia_capensis
ENSMAUG00000008025	Parn	100	79.134	ENSPCOG00000019292	PARN	95	94.286	Propithecus_coquereli
ENSMAUG00000008025	Parn	99	75.312	ENSPVAG00000002547	PARN	100	75.312	Pteropus_vampyrus
ENSMAUG00000008025	Parn	100	60.681	ENSPNYG00000006835	parn	100	60.526	Pundamilia_nyererei
ENSMAUG00000008025	Parn	83	70.291	ENSPNAG00000018905	parn	82	70.291	Pygocentrus_nattereri
ENSMAUG00000008025	Parn	100	83.410	ENSRNOG00000002912	Parn	100	96.040	Rattus_norvegicus
ENSMAUG00000008025	Parn	51	83.178	ENSRBIG00000018726	PARN	96	82.866	Rhinopithecus_bieti
ENSMAUG00000008025	Parn	51	83.178	ENSRROG00000011162	-	96	82.866	Rhinopithecus_roxellana
ENSMAUG00000008025	Parn	100	78.154	ENSSBOG00000034726	PARN	95	94.286	Saimiri_boliviensis_boliviensis
ENSMAUG00000008025	Parn	65	78.923	ENSSHAG00000008493	PARN	94	78.923	Sarcophilus_harrisii
ENSMAUG00000008025	Parn	89	69.352	ENSSFOG00015014165	parn	94	66.667	Scleropages_formosus
ENSMAUG00000008025	Parn	100	58.257	ENSSMAG00000000685	parn	100	58.410	Scophthalmus_maximus
ENSMAUG00000008025	Parn	90	67.747	ENSSDUG00000014555	parn	83	67.747	Seriola_dumerili
ENSMAUG00000008025	Parn	84	85.327	ENSSARG00000014339	PARN	89	85.327	Sorex_araneus
ENSMAUG00000008025	Parn	100	74.268	ENSSPUG00000007719	PARN	100	74.268	Sphenodon_punctatus
ENSMAUG00000008025	Parn	91	68.889	ENSSPAG00000007095	parn	86	67.035	Stegastes_partitus
ENSMAUG00000008025	Parn	100	78.582	ENSSSCG00000007878	PARN	89	78.582	Sus_scrofa
ENSMAUG00000008025	Parn	99	73.676	ENSTGUG00000004971	PARN	99	73.676	Taeniopygia_guttata
ENSMAUG00000008025	Parn	100	63.117	ENSTNIG00000008252	parn	100	63.426	Tetraodon_nigroviridis
ENSMAUG00000008025	Parn	94	70.847	ENSTBEG00000010407	PARN	100	70.678	Tupaia_belangeri
ENSMAUG00000008025	Parn	99	74.062	ENSTTRG00000002843	PARN	100	74.062	Tursiops_truncatus
ENSMAUG00000008025	Parn	77	72.117	ENSUAMG00000008283	PARN	90	76.180	Ursus_americanus
ENSMAUG00000008025	Parn	100	79.045	ENSUMAG00000004527	PARN	100	79.045	Ursus_maritimus
ENSMAUG00000008025	Parn	96	76.404	ENSVPAG00000008968	PARN	99	76.404	Vicugna_pacos
ENSMAUG00000008025	Parn	100	78.891	ENSVVUG00000019509	PARN	100	78.891	Vulpes_vulpes
ENSMAUG00000008025	Parn	100	66.615	ENSXETG00000010994	parn	100	73.645	Xenopus_tropicalis
ENSMAUG00000008025	Parn	90	64.948	ENSXCOG00000015990	parn	96	64.626	Xiphophorus_couchianus
ENSMAUG00000008025	Parn	91	66.667	ENSXMAG00000014783	parn	83	66.667	Xiphophorus_maculatus