EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000008497 (Gene tree)
Gene ID: 101822487
Gene Symbol: Polr1a
Alias: 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 55748 bases
Position: chrKB708185.1:12324262-12380009
Accession: 101822487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000006615	RNA_pol_Rpb1_5	PF04998.17	1.4e-103	1	1
ENSMAUP00000006615	RNA_pol_Rpb1_4	PF05000.17	1.1e-25	1	1
ENSMAUP00000006615	RNA_pol_Rpb1_2	PF00623.20	2.2e-70	1	1
ENSMAUP00000006615	RNA_pol_Rpb1_3	PF04983.18	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000010417	-	7248	XM_005076124	ENSMAUP00000006615	1573 (aa)	XP_021086309	-

Gene Model

Click here to download ENSMAUG00000008497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000008497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000008497	Polr1a	68	32.548	ENSMAUG00000016247	Polr3a	70	32.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000008497	Polr1a	100	87.176	ENSG00000068654	POLR1A	92	87.366	Homo_sapiens
ENSMAUG00000008497	Polr1a	66	67.341	ENSAPOG00000017945	polr1a	98	66.985	Acanthochromis_polyacanthus
ENSMAUG00000008497	Polr1a	100	88.101	ENSAMEG00000005807	POLR1A	92	87.468	Ailuropoda_melanoleuca
ENSMAUG00000008497	Polr1a	91	68.188	ENSACIG00000022147	polr1a	88	67.012	Amphilophus_citrinellus
ENSMAUG00000008497	Polr1a	99	65.798	ENSAOCG00000017336	polr1a	89	68.763	Amphiprion_ocellaris
ENSMAUG00000008497	Polr1a	99	65.734	ENSAPEG00000016105	polr1a	91	65.635	Amphiprion_percula
ENSMAUG00000008497	Polr1a	99	65.574	ENSATEG00000016773	polr1a	91	65.868	Anabas_testudineus
ENSMAUG00000008497	Polr1a	93	73.383	ENSAPLG00000013871	POLR1A	99	72.136	Anas_platyrhynchos
ENSMAUG00000008497	Polr1a	100	69.007	ENSACAG00000012141	POLR1A	92	68.817	Anolis_carolinensis
ENSMAUG00000008497	Polr1a	100	87.105	ENSANAG00000033927	POLR1A	92	87.231	Aotus_nancymaae
ENSMAUG00000008497	Polr1a	98	62.308	ENSACLG00000020541	polr1a	91	62.564	Astatotilapia_calliptera
ENSMAUG00000008497	Polr1a	100	87.540	ENSBTAG00000006481	POLR1A	92	87.231	Bos_taurus
ENSMAUG00000008497	Polr1a	97	39.413	WBGene00012999	rpoa-1	77	57.609	Caenorhabditis_elegans
ENSMAUG00000008497	Polr1a	100	86.418	ENSCJAG00000019547	POLR1A	92	86.608	Callithrix_jacchus
ENSMAUG00000008497	Polr1a	100	87.342	ENSCAFG00000007613	POLR1A	92	87.532	Canis_familiaris
ENSMAUG00000008497	Polr1a	100	87.658	ENSCAFG00020014752	POLR1A	92	87.848	Canis_lupus_dingo
ENSMAUG00000008497	Polr1a	100	87.166	ENSCHIG00000018204	POLR1A	92	86.595	Capra_hircus
ENSMAUG00000008497	Polr1a	100	86.384	ENSTSYG00000002761	POLR1A	92	86.384	Carlito_syrichta
ENSMAUG00000008497	Polr1a	100	83.820	ENSCAPG00000010132	POLR1A	94	83.820	Cavia_aperea
ENSMAUG00000008497	Polr1a	100	88.945	ENSCPOG00000012350	POLR1A	92	88.945	Cavia_porcellus
ENSMAUG00000008497	Polr1a	100	86.860	ENSCCAG00000019839	POLR1A	92	87.050	Cebus_capucinus
ENSMAUG00000008497	Polr1a	100	87.492	ENSCATG00000029786	POLR1A	92	87.146	Cercocebus_atys
ENSMAUG00000008497	Polr1a	100	89.347	ENSCLAG00000005187	POLR1A	92	89.157	Chinchilla_lanigera
ENSMAUG00000008497	Polr1a	100	87.618	ENSCSAG00000016251	POLR1A	92	87.335	Chlorocebus_sabaeus
ENSMAUG00000008497	Polr1a	99	74.541	ENSCPBG00000001115	POLR1A	92	74.541	Chrysemys_picta_bellii
ENSMAUG00000008497	Polr1a	98	47.442	ENSCSAVG00000007184	-	90	47.022	Ciona_savignyi
ENSMAUG00000008497	Polr1a	100	84.659	ENSCANG00000031785	POLR1A	92	84.320	Colobus_angolensis_palliatus
ENSMAUG00000008497	Polr1a	100	92.186	ENSCGRG00001006651	Polr1a	91	92.186	Cricetulus_griseus_chok1gshd
ENSMAUG00000008497	Polr1a	65	97.756	ENSCGRG00000010834	Polr1a	100	97.756	Cricetulus_griseus_crigri
ENSMAUG00000008497	Polr1a	100	61.699	ENSCSEG00000020190	polr1a	91	61.407	Cynoglossus_semilaevis
ENSMAUG00000008497	Polr1a	99	63.300	ENSCVAG00000020941	polr1a	91	63.711	Cyprinodon_variegatus
ENSMAUG00000008497	Polr1a	100	66.646	ENSDARG00000098375	polr1a	91	66.751	Danio_rerio
ENSMAUG00000008497	Polr1a	100	81.317	ENSDNOG00000010829	POLR1A	92	81.317	Dasypus_novemcinctus
ENSMAUG00000008497	Polr1a	100	89.444	ENSDORG00000008298	Polr1a	92	89.444	Dipodomys_ordii
ENSMAUG00000008497	Polr1a	76	46.733	FBgn0019938	RpI1	89	45.083	Drosophila_melanogaster
ENSMAUG00000008497	Polr1a	69	96.875	ENSETEG00000000412	-	63	96.875	Echinops_telfairi
ENSMAUG00000008497	Polr1a	98	48.165	ENSEBUG00000005667	-	93	67.442	Eptatretus_burgeri
ENSMAUG00000008497	Polr1a	100	87.997	ENSEASG00005001625	POLR1A	92	87.942	Equus_asinus_asinus
ENSMAUG00000008497	Polr1a	100	88.061	ENSECAG00000030510	-	94	88.005	Equus_caballus
ENSMAUG00000008497	Polr1a	100	88.061	ENSECAG00000010092	POLR1A	94	88.005	Equus_caballus
ENSMAUG00000008497	Polr1a	100	88.061	ENSECAG00000036306	-	91	90.788	Equus_caballus
ENSMAUG00000008497	Polr1a	87	93.076	ENSEEUG00000000676	POLR1A	80	93.076	Erinaceus_europaeus
ENSMAUG00000008497	Polr1a	100	65.387	ENSELUG00000012769	polr1a	90	66.159	Esox_lucius
ENSMAUG00000008497	Polr1a	100	87.745	ENSFCAG00000008966	POLR1A	92	87.492	Felis_catus
ENSMAUG00000008497	Polr1a	99	71.610	ENSFALG00000010082	POLR1A	92	70.984	Ficedula_albicollis
ENSMAUG00000008497	Polr1a	100	89.270	ENSFDAG00000013726	POLR1A	92	89.079	Fukomys_damarensis
ENSMAUG00000008497	Polr1a	99	60.710	ENSFHEG00000005996	polr1a	91	60.506	Fundulus_heteroclitus
ENSMAUG00000008497	Polr1a	98	61.988	ENSGMOG00000002230	polr1a	91	61.818	Gadus_morhua
ENSMAUG00000008497	Polr1a	90	69.209	ENSGALG00000038160	-	90	68.693	Gallus_gallus
ENSMAUG00000008497	Polr1a	97	66.103	ENSGAFG00000015266	polr1a	90	65.974	Gambusia_affinis
ENSMAUG00000008497	Polr1a	99	63.436	ENSGACG00000018791	polr1a	92	63.940	Gasterosteus_aculeatus
ENSMAUG00000008497	Polr1a	98	75.519	ENSGAGG00000004984	-	96	80.678	Gopherus_agassizii
ENSMAUG00000008497	Polr1a	100	87.239	ENSGGOG00000001788	POLR1A	92	87.429	Gorilla_gorilla
ENSMAUG00000008497	Polr1a	81	70.071	ENSHBUG00000020021	polr1a	82	70.265	Haplochromis_burtoni
ENSMAUG00000008497	Polr1a	100	89.898	ENSHGLG00000006334	POLR1A	92	89.898	Heterocephalus_glaber_female
ENSMAUG00000008497	Polr1a	100	89.614	ENSHGLG00100006614	POLR1A	92	89.614	Heterocephalus_glaber_male
ENSMAUG00000008497	Polr1a	97	63.695	ENSHCOG00000003345	polr1a	91	63.454	Hippocampus_comes
ENSMAUG00000008497	Polr1a	100	66.246	ENSIPUG00000013174	polr1a	92	65.828	Ictalurus_punctatus
ENSMAUG00000008497	Polr1a	100	87.413	ENSSTOG00000012580	POLR1A	92	87.476	Ictidomys_tridecemlineatus
ENSMAUG00000008497	Polr1a	100	90.482	ENSJJAG00000013113	Polr1a	92	90.673	Jaculus_jaculus
ENSMAUG00000008497	Polr1a	99	65.019	ENSKMAG00000007399	polr1a	91	64.635	Kryptolebias_marmoratus
ENSMAUG00000008497	Polr1a	90	68.869	ENSLBEG00000015401	polr1a	87	68.531	Labrus_bergylta
ENSMAUG00000008497	Polr1a	100	70.659	ENSLOCG00000010881	polr1a	92	70.722	Lepisosteus_oculatus
ENSMAUG00000008497	Polr1a	100	86.739	ENSLAFG00000014948	POLR1A	92	86.565	Loxodonta_africana
ENSMAUG00000008497	Polr1a	100	87.618	ENSMFAG00000046097	POLR1A	92	87.272	Macaca_fascicularis
ENSMAUG00000008497	Polr1a	100	87.618	ENSMMUG00000015815	POLR1A	92	87.272	Macaca_mulatta
ENSMAUG00000008497	Polr1a	100	87.618	ENSMNEG00000043313	POLR1A	92	87.272	Macaca_nemestrina
ENSMAUG00000008497	Polr1a	100	86.924	ENSMLEG00000042428	POLR1A	92	86.578	Mandrillus_leucophaeus
ENSMAUG00000008497	Polr1a	100	65.906	ENSMAMG00000016565	polr1a	91	65.926	Mastacembelus_armatus
ENSMAUG00000008497	Polr1a	100	64.861	ENSMZEG00005004915	polr1a	91	65.127	Maylandia_zebra
ENSMAUG00000008497	Polr1a	99	69.265	ENSMGAG00000013111	POLR1A	92	69.090	Meleagris_gallopavo
ENSMAUG00000008497	Polr1a	100	88.321	ENSMICG00000000757	POLR1A	92	88.258	Microcebus_murinus
ENSMAUG00000008497	Polr1a	100	95.550	ENSMOCG00000000122	Polr1a	92	95.486	Microtus_ochrogaster
ENSMAUG00000008497	Polr1a	99	64.971	ENSMMOG00000010216	polr1a	91	64.553	Mola_mola
ENSMAUG00000008497	Polr1a	100	75.016	ENSMODG00000009335	POLR1A	72	82.297	Monodelphis_domestica
ENSMAUG00000008497	Polr1a	100	64.956	ENSMALG00000013363	polr1a	98	64.851	Monopterus_albus
ENSMAUG00000008497	Polr1a	100	93.011	MGP_CAROLIEiJ_G0028494	Polr1a	100	90.310	Mus_caroli
ENSMAUG00000008497	Polr1a	100	93.139	ENSMUSG00000049553	Polr1a	99	90.310	Mus_musculus
ENSMAUG00000008497	Polr1a	100	93.643	MGP_PahariEiJ_G0022230	Polr1a	100	90.566	Mus_pahari
ENSMAUG00000008497	Polr1a	100	90.717	MGP_SPRETEiJ_G0029499	Polr1a	100	91.925	Mus_spretus
ENSMAUG00000008497	Polr1a	100	88.109	ENSMPUG00000009135	POLR1A	92	88.109	Mustela_putorius_furo
ENSMAUG00000008497	Polr1a	100	86.797	ENSMLUG00000015723	POLR1A	92	86.987	Myotis_lucifugus
ENSMAUG00000008497	Polr1a	100	92.503	ENSNGAG00000017907	Polr1a	92	92.503	Nannospalax_galili
ENSMAUG00000008497	Polr1a	100	65.506	ENSNBRG00000000519	polr1a	91	65.253	Neolamprologus_brichardi
ENSMAUG00000008497	Polr1a	100	85.292	ENSNLEG00000002264	POLR1A	92	85.607	Nomascus_leucogenys
ENSMAUG00000008497	Polr1a	71	93.701	ENSMEUG00000011665	-	65	93.701	Notamacropus_eugenii
ENSMAUG00000008497	Polr1a	99	84.373	ENSOPRG00000008269	POLR1A	91	83.967	Ochotona_princeps
ENSMAUG00000008497	Polr1a	100	89.714	ENSODEG00000003542	POLR1A	92	89.778	Octodon_degus
ENSMAUG00000008497	Polr1a	100	65.212	ENSONIG00000015895	polr1a	92	65.256	Oreochromis_niloticus
ENSMAUG00000008497	Polr1a	100	89.290	ENSOCUG00000010138	POLR1A	92	89.340	Oryctolagus_cuniculus
ENSMAUG00000008497	Polr1a	99	64.408	ENSORLG00000008753	polr1a	91	64.245	Oryzias_latipes
ENSMAUG00000008497	Polr1a	99	63.165	ENSORLG00020020726	polr1a	91	62.846	Oryzias_latipes_hni
ENSMAUG00000008497	Polr1a	99	62.689	ENSORLG00015016071	polr1a	94	62.555	Oryzias_latipes_hsok
ENSMAUG00000008497	Polr1a	100	88.503	ENSOGAG00000004031	POLR1A	92	88.250	Otolemur_garnettii
ENSMAUG00000008497	Polr1a	100	87.060	ENSOARG00000020601	POLR1A	92	87.516	Ovis_aries
ENSMAUG00000008497	Polr1a	100	86.987	ENSPPAG00000042450	POLR1A	92	87.176	Pan_paniscus
ENSMAUG00000008497	Polr1a	100	87.555	ENSPPRG00000006702	POLR1A	92	87.555	Panthera_pardus
ENSMAUG00000008497	Polr1a	100	87.036	ENSPTIG00000018783	POLR1A	92	87.036	Panthera_tigris_altaica
ENSMAUG00000008497	Polr1a	100	86.924	ENSPTRG00000012147	POLR1A	92	87.113	Pan_troglodytes
ENSMAUG00000008497	Polr1a	100	87.555	ENSPANG00000025908	POLR1A	92	87.209	Papio_anubis
ENSMAUG00000008497	Polr1a	100	66.561	ENSPKIG00000005468	polr1a	92	66.286	Paramormyrops_kingsleyae
ENSMAUG00000008497	Polr1a	68	72.407	ENSPSIG00000009321	-	99	71.019	Pelodiscus_sinensis
ENSMAUG00000008497	Polr1a	50	70.558	ENSPMGG00000009718	polr1a	81	70.558	Periophthalmus_magnuspinnatus
ENSMAUG00000008497	Polr1a	100	96.379	ENSPEMG00000022224	Polr1a	92	96.379	Peromyscus_maniculatus_bairdii
ENSMAUG00000008497	Polr1a	94	79.451	ENSPCIG00000004222	POLR1A	90	79.518	Phascolarctos_cinereus
ENSMAUG00000008497	Polr1a	99	64.598	ENSPFOG00000005025	polr1a	91	64.661	Poecilia_formosa
ENSMAUG00000008497	Polr1a	99	64.975	ENSPLAG00000021389	polr1a	91	64.975	Poecilia_latipinna
ENSMAUG00000008497	Polr1a	99	62.429	ENSPMEG00000006463	polr1a	91	62.998	Poecilia_mexicana
ENSMAUG00000008497	Polr1a	99	64.832	ENSPREG00000002389	polr1a	93	64.524	Poecilia_reticulata
ENSMAUG00000008497	Polr1a	100	86.734	ENSPPYG00000012217	POLR1A	92	86.924	Pongo_abelii
ENSMAUG00000008497	Polr1a	96	81.803	ENSPCAG00000011582	POLR1A	88	81.803	Procavia_capensis
ENSMAUG00000008497	Polr1a	100	87.957	ENSPCOG00000026987	POLR1A	92	88.020	Propithecus_coquereli
ENSMAUG00000008497	Polr1a	94	85.725	ENSPVAG00000012674	POLR1A	87	85.872	Pteropus_vampyrus
ENSMAUG00000008497	Polr1a	100	64.947	ENSPNYG00000000026	polr1a	91	65.127	Pundamilia_nyererei
ENSMAUG00000008497	Polr1a	100	68.228	ENSPNAG00000019223	polr1a	92	68.121	Pygocentrus_nattereri
ENSMAUG00000008497	Polr1a	100	94.723	ENSRNOG00000009545	Polr1a	92	94.278	Rattus_norvegicus
ENSMAUG00000008497	Polr1a	100	86.924	ENSRBIG00000028335	POLR1A	92	86.704	Rhinopithecus_bieti
ENSMAUG00000008497	Polr1a	100	86.860	ENSRROG00000031473	POLR1A	100	85.185	Rhinopithecus_roxellana
ENSMAUG00000008497	Polr1a	99	36.731	YOR341W	RPA190	89	36.731	Saccharomyces_cerevisiae
ENSMAUG00000008497	Polr1a	100	86.481	ENSSBOG00000030262	POLR1A	92	86.671	Saimiri_boliviensis_boliviensis
ENSMAUG00000008497	Polr1a	100	73.409	ENSSHAG00000014739	POLR1A	92	73.220	Sarcophilus_harrisii
ENSMAUG00000008497	Polr1a	100	67.427	ENSSFOG00015019716	polr1a	92	67.025	Scleropages_formosus
ENSMAUG00000008497	Polr1a	100	64.943	ENSSMAG00000014342	polr1a	91	64.295	Scophthalmus_maximus
ENSMAUG00000008497	Polr1a	100	66.350	ENSSDUG00000014631	polr1a	91	66.351	Seriola_dumerili
ENSMAUG00000008497	Polr1a	98	65.325	ENSSLDG00000024095	polr1a	90	65.327	Seriola_lalandi_dorsalis
ENSMAUG00000008497	Polr1a	77	96.809	ENSSARG00000003136	-	72	96.809	Sorex_araneus
ENSMAUG00000008497	Polr1a	99	70.450	ENSSPUG00000004215	POLR1A	89	76.923	Sphenodon_punctatus
ENSMAUG00000008497	Polr1a	58	71.227	ENSSPAG00000016341	polr1a	81	70.646	Stegastes_partitus
ENSMAUG00000008497	Polr1a	82	88.975	ENSSSCG00000008226	POLR1A	89	88.941	Sus_scrofa
ENSMAUG00000008497	Polr1a	99	71.011	ENSTGUG00000010704	POLR1A	93	70.947	Taeniopygia_guttata
ENSMAUG00000008497	Polr1a	99	62.751	ENSTRUG00000002210	polr1a	91	63.538	Takifugu_rubripes
ENSMAUG00000008497	Polr1a	99	59.332	ENSTNIG00000010116	polr1a	92	59.269	Tetraodon_nigroviridis
ENSMAUG00000008497	Polr1a	71	96.903	ENSTBEG00000008646	POLR1A	65	96.903	Tupaia_belangeri
ENSMAUG00000008497	Polr1a	100	83.565	ENSTTRG00000008597	POLR1A	92	83.112	Tursiops_truncatus
ENSMAUG00000008497	Polr1a	75	87.976	ENSUAMG00000012158	-	94	87.871	Ursus_americanus
ENSMAUG00000008497	Polr1a	100	86.844	ENSUMAG00000006700	POLR1A	92	86.582	Ursus_maritimus
ENSMAUG00000008497	Polr1a	100	87.152	ENSVVUG00000001245	POLR1A	92	87.342	Vulpes_vulpes
ENSMAUG00000008497	Polr1a	100	68.501	ENSXETG00000001952	polr1a	92	68.501	Xenopus_tropicalis
ENSMAUG00000008497	Polr1a	99	64.702	ENSXMAG00000004032	polr1a	91	64.702	Xiphophorus_maculatus