EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMAUG00000008550 (Gene tree)
Gene ID
101831296
Gene Symbol
Rbms1
Alias
-
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Mesocricetus_auratus
Status
putative
Strand
Minus strand
Length
208606 bases
Position
chrKB708143.1:20970672-21179277
Accession
101831296
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMAUP00000006688RRM_1PF00076.226.5e-3312
ENSMAUP00000006688RRM_1PF00076.226.5e-3322
ENSMAUP00000006681RRM_1PF00076.227e-3312
ENSMAUP00000006681RRM_1PF00076.227e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMAUT00000010490-1212XM_005068999ENSMAUP00000006688403 (aa)XP_005069056A0A1U7QM65
ENSMAUT00000010483-2484XM_005069001ENSMAUP00000006681417 (aa)XP_005069058A0A1U7Q9V1
Gene Model
Click here to download ENSMAUG00000008550's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000008550's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMAUG00000008550Rbms15633.871ENSMAUG00000021566Elavl47334.783
ENSMAUG00000008550Rbms110069.740ENSMAUG00000016436Rbms39972.170
ENSMAUG00000008550Rbms16661.940ENSMAUG00000016984Rbms210061.940
ENSMAUG00000008550Rbms15135.484ENSMAUG00000016478Elavl36336.207
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMAUG00000008550Rbms110096.552ENSG00000153250RBMS110098.425Homo_sapiens
ENSMAUG00000008550Rbms19061.436ENSAPOG00000013761rbms1a8964.826Acanthochromis_polyacanthus
ENSMAUG00000008550Rbms110072.986ENSAPOG00000024437-10072.038Acanthochromis_polyacanthus
ENSMAUG00000008550Rbms19495.573ENSAMEG00000012661RBMS110095.573Ailuropoda_melanoleuca
ENSMAUG00000008550Rbms18658.551ENSACIG00000000113rbms1a8958.721Amphilophus_citrinellus
ENSMAUG00000008550Rbms19675.578ENSACIG00000021498RBMS19775.578Amphilophus_citrinellus
ENSMAUG00000008550Rbms19958.738ENSAOCG00000010066rbms1a8965.217Amphiprion_ocellaris
ENSMAUG00000008550Rbms110073.634ENSAOCG00000014482-10073.634Amphiprion_ocellaris
ENSMAUG00000008550Rbms110073.397ENSAPEG00000018371-10073.397Amphiprion_percula
ENSMAUG00000008550Rbms19958.738ENSAPEG00000023563rbms1a8965.116Amphiprion_percula
ENSMAUG00000008550Rbms110071.021ENSATEG00000018573RBMS110070.546Anabas_testudineus
ENSMAUG00000008550Rbms18964.167ENSATEG00000015450rbms1a8964.826Anabas_testudineus
ENSMAUG00000008550Rbms19592.932ENSAPLG00000007282RBMS110092.911Anas_platyrhynchos
ENSMAUG00000008550Rbms19591.710ENSACAG00000011984RBMS18089.896Anolis_carolinensis
ENSMAUG00000008550Rbms17996.273ENSANAG00000024424RBMS110096.273Aotus_nancymaae
ENSMAUG00000008550Rbms18664.348ENSACLG00000021512rbms1a9064.535Astatotilapia_calliptera
ENSMAUG00000008550Rbms110070.238ENSACLG00000013048RBMS110070.238Astatotilapia_calliptera
ENSMAUG00000008550Rbms110074.510ENSAMXG00000009969RBMS110075.735Astyanax_mexicanus
ENSMAUG00000008550Rbms19669.779ENSAMXG00000002146rbms1a9768.796Astyanax_mexicanus
ENSMAUG00000008550Rbms110095.476ENSBTAG00000005180RBMS110095.476Bos_taurus
ENSMAUG00000008550Rbms19190.710ENSCJAG00000022465-9890.237Callithrix_jacchus
ENSMAUG00000008550Rbms110096.798ENSCJAG00000014861-10096.798Callithrix_jacchus
ENSMAUG00000008550Rbms19990.274ENSCJAG00000012871-9994.102Callithrix_jacchus
ENSMAUG00000008550Rbms19597.468ENSCAFG00000009922RBMS110091.905Canis_familiaris
ENSMAUG00000008550Rbms110097.519ENSCAFG00020006120RBMS110097.519Canis_lupus_dingo
ENSMAUG00000008550Rbms110097.519ENSCHIG00000023380RBMS110097.519Capra_hircus
ENSMAUG00000008550Rbms110096.798ENSTSYG00000005584RBMS110097.297Carlito_syrichta
ENSMAUG00000008550Rbms110097.519ENSCPOG00000012310RBMS110097.519Cavia_porcellus
ENSMAUG00000008550Rbms110096.798ENSCCAG00000033841RBMS110096.798Cebus_capucinus
ENSMAUG00000008550Rbms110096.798ENSCATG00000043032RBMS110097.409Cercocebus_atys
ENSMAUG00000008550Rbms110097.767ENSCLAG00000003031RBMS110097.767Chinchilla_lanigera
ENSMAUG00000008550Rbms110096.798ENSCSAG00000015687RBMS110096.798Chlorocebus_sabaeus
ENSMAUG00000008550Rbms15498.507ENSCHOG00000001579RBMS17398.507Choloepus_hoffmanni
ENSMAUG00000008550Rbms110092.857ENSCPBG00000026455RBMS110092.857Chrysemys_picta_bellii
ENSMAUG00000008550Rbms110096.798ENSCANG00000042152RBMS110097.297Colobus_angolensis_palliatus
ENSMAUG00000008550Rbms110099.504ENSCGRG00001022833Rbms110099.504Cricetulus_griseus_chok1gshd
ENSMAUG00000008550Rbms110099.504ENSCGRG00000008824Rbms110099.504Cricetulus_griseus_crigri
ENSMAUG00000008550Rbms18961.944ENSCSEG00000000889rbms1a9062.500Cynoglossus_semilaevis
ENSMAUG00000008550Rbms110068.558ENSCSEG00000010652RBMS19473.295Cynoglossus_semilaevis
ENSMAUG00000008550Rbms110069.121ENSCVAG00000002027RBMS19675.568Cyprinodon_variegatus
ENSMAUG00000008550Rbms19061.702ENSCVAG00000014698rbms1a8964.826Cyprinodon_variegatus
ENSMAUG00000008550Rbms19669.779ENSDARG00000074023rbms1a9768.796Danio_rerio
ENSMAUG00000008550Rbms19396.658ENSDNOG00000040691RBMS110096.658Dasypus_novemcinctus
ENSMAUG00000008550Rbms110097.519ENSDORG00000007103Rbms110097.668Dipodomys_ordii
ENSMAUG00000008550Rbms19485.039ENSETEG00000012135RBMS110085.039Echinops_telfairi
ENSMAUG00000008550Rbms110096.190ENSEASG00005023132RBMS110096.190Equus_asinus_asinus
ENSMAUG00000008550Rbms110097.291ENSECAG00000019894RBMS110097.291Equus_caballus
ENSMAUG00000008550Rbms179100.000ENSEEUG00000005628RBMS179100.000Erinaceus_europaeus
ENSMAUG00000008550Rbms19562.438ENSELUG00000018923rbms1a9468.000Esox_lucius
ENSMAUG00000008550Rbms19370.526ENSELUG00000019328RBMS19470.526Esox_lucius
ENSMAUG00000008550Rbms110096.552ENSFCAG00000012524RBMS110097.027Felis_catus
ENSMAUG00000008550Rbms18792.550ENSFALG00000004440RBMS19492.550Ficedula_albicollis
ENSMAUG00000008550Rbms110098.015ENSFDAG00000015692RBMS110098.015Fukomys_damarensis
ENSMAUG00000008550Rbms110068.409ENSFHEG00000000720RBMS110068.646Fundulus_heteroclitus
ENSMAUG00000008550Rbms19061.968ENSFHEG00000005662rbms1a7980.892Fundulus_heteroclitus
ENSMAUG00000008550Rbms18363.218ENSGMOG00000000525rbms1a9962.500Gadus_morhua
ENSMAUG00000008550Rbms110087.770ENSGALG00000011132RBMS110087.770Gallus_gallus
ENSMAUG00000008550Rbms19473.177ENSGAFG00000007708RBMS19771.358Gambusia_affinis
ENSMAUG00000008550Rbms18964.444ENSGAFG00000011633rbms1a9565.116Gambusia_affinis
ENSMAUG00000008550Rbms19061.702ENSGACG00000015174rbms1a9165.944Gasterosteus_aculeatus
ENSMAUG00000008550Rbms110069.834ENSGACG00000005671RBMS110069.359Gasterosteus_aculeatus
ENSMAUG00000008550Rbms110092.611ENSGAGG00000007866RBMS110092.611Gopherus_agassizii
ENSMAUG00000008550Rbms110089.048ENSGGOG00000043756-10089.048Gorilla_gorilla
ENSMAUG00000008550Rbms19695.128ENSGGOG00000001264RBMS110097.150Gorilla_gorilla
ENSMAUG00000008550Rbms19472.152ENSHBUG00000004516RBMS19476.323Haplochromis_burtoni
ENSMAUG00000008550Rbms18664.348ENSHBUG00000004802rbms1a9064.535Haplochromis_burtoni
ENSMAUG00000008550Rbms110097.270ENSHGLG00000010387RBMS110097.270Heterocephalus_glaber_female
ENSMAUG00000008550Rbms19893.719ENSHGLG00100014105RBMS110097.208Heterocephalus_glaber_male
ENSMAUG00000008550Rbms18962.500ENSHCOG00000020097rbms1a8963.081Hippocampus_comes
ENSMAUG00000008550Rbms110068.409ENSHCOG00000016668RBMS110068.409Hippocampus_comes
ENSMAUG00000008550Rbms19670.025ENSIPUG00000010131RBMS19769.042Ictalurus_punctatus
ENSMAUG00000008550Rbms110077.396ENSIPUG00000014677RBMS110077.396Ictalurus_punctatus
ENSMAUG00000008550Rbms110097.767ENSSTOG00000012501RBMS110097.767Ictidomys_tridecemlineatus
ENSMAUG00000008550Rbms110097.270ENSJJAG00000016543Rbms110097.270Jaculus_jaculus
ENSMAUG00000008550Rbms19377.394ENSKMAG00000013911RBMS19477.394Kryptolebias_marmoratus
ENSMAUG00000008550Rbms19059.947ENSKMAG00000011839-8963.188Kryptolebias_marmoratus
ENSMAUG00000008550Rbms110071.496ENSLBEG00000005787RBMS110071.496Labrus_bergylta
ENSMAUG00000008550Rbms19958.252ENSLBEG00000025962rbms1a8964.535Labrus_bergylta
ENSMAUG00000008550Rbms110077.541ENSLACG00000004324RBMS110076.289Latimeria_chalumnae
ENSMAUG00000008550Rbms19384.574ENSLOCG00000008622rbms1a9484.574Lepisosteus_oculatus
ENSMAUG00000008550Rbms19496.306ENSLAFG00000017217RBMS110096.306Loxodonta_africana
ENSMAUG00000008550Rbms110096.798ENSMFAG00000000274RBMS110097.297Macaca_fascicularis
ENSMAUG00000008550Rbms110096.798ENSMMUG00000016825RBMS110096.798Macaca_mulatta
ENSMAUG00000008550Rbms110096.798ENSMNEG00000039425RBMS110097.297Macaca_nemestrina
ENSMAUG00000008550Rbms19991.852ENSMLEG00000031517RBMS110097.027Mandrillus_leucophaeus
ENSMAUG00000008550Rbms110070.784ENSMAMG00000003159-10071.259Mastacembelus_armatus
ENSMAUG00000008550Rbms18962.500ENSMAMG00000005018rbms1a8963.081Mastacembelus_armatus
ENSMAUG00000008550Rbms18664.348ENSMZEG00005005661rbms1a9064.535Maylandia_zebra
ENSMAUG00000008550Rbms18177.134ENSMZEG00005007313RBMS19177.064Maylandia_zebra
ENSMAUG00000008550Rbms18791.761ENSMGAG00000011054RBMS110090.578Meleagris_gallopavo
ENSMAUG00000008550Rbms110096.305ENSMICG00000008325RBMS110096.891Microcebus_murinus
ENSMAUG00000008550Rbms110098.263ENSMOCG00000022617Rbms110098.263Microtus_ochrogaster
ENSMAUG00000008550Rbms110071.259ENSMMOG00000003707RBMS19675.781Mola_mola
ENSMAUG00000008550Rbms18760.274ENSMMOG00000018249rbms1a8168.121Mola_mola
ENSMAUG00000008550Rbms110094.789ENSMODG00000005250RBMS110094.789Monodelphis_domestica
ENSMAUG00000008550Rbms18963.611ENSMALG00000014235rbms1a8964.244Monopterus_albus
ENSMAUG00000008550Rbms19669.900ENSMALG00000015715-9968.106Monopterus_albus
ENSMAUG00000008550Rbms110097.519MGP_CAROLIEiJ_G0023586Rbms110097.519Mus_caroli
ENSMAUG00000008550Rbms110098.015ENSMUSG00000026970Rbms110098.015Mus_musculus
ENSMAUG00000008550Rbms110097.122MGP_PahariEiJ_G0025037Rbms110097.122Mus_pahari
ENSMAUG00000008550Rbms110097.767MGP_SPRETEiJ_G0024508Rbms110097.767Mus_spretus
ENSMAUG00000008550Rbms110094.033ENSMPUG00000000539RBMS110094.033Mustela_putorius_furo
ENSMAUG00000008550Rbms19595.718ENSMLUG00000008762RBMS19595.718Myotis_lucifugus
ENSMAUG00000008550Rbms110098.015ENSNGAG00000013636Rbms110098.015Nannospalax_galili
ENSMAUG00000008550Rbms18771.955ENSNBRG00000015151RBMS19472.159Neolamprologus_brichardi
ENSMAUG00000008550Rbms17467.000ENSNBRG00000020217rbms1a8567.224Neolamprologus_brichardi
ENSMAUG00000008550Rbms110096.552ENSNLEG00000001667RBMS110097.027Nomascus_leucogenys
ENSMAUG00000008550Rbms17980.124ENSMEUG00000000746RBMS110080.124Notamacropus_eugenii
ENSMAUG00000008550Rbms110089.655ENSOPRG00000012431RBMS110089.655Ochotona_princeps
ENSMAUG00000008550Rbms110097.767ENSODEG00000013934RBMS110097.767Octodon_degus
ENSMAUG00000008550Rbms19959.080ENSONIG00000003329rbms1a8865.407Oreochromis_niloticus
ENSMAUG00000008550Rbms110070.952ENSONIG00000008934RBMS110070.952Oreochromis_niloticus
ENSMAUG00000008550Rbms19493.176ENSOANG00000006166RBMS19693.176Ornithorhynchus_anatinus
ENSMAUG00000008550Rbms15356.067ENSOANG00000004477-9957.083Ornithorhynchus_anatinus
ENSMAUG00000008550Rbms19496.042ENSOCUG00000017365RBMS18996.042Oryctolagus_cuniculus
ENSMAUG00000008550Rbms18874.022ENSORLG00000016818RBMS19668.395Oryzias_latipes
ENSMAUG00000008550Rbms18962.222ENSORLG00000003917rbms1a9062.791Oryzias_latipes
ENSMAUG00000008550Rbms18961.944ENSORLG00020018663rbms1a9062.500Oryzias_latipes_hni
ENSMAUG00000008550Rbms19668.069ENSORLG00020022335RBMS19966.746Oryzias_latipes_hni
ENSMAUG00000008550Rbms18962.222ENSORLG00015016556rbms1a9062.899Oryzias_latipes_hsok
ENSMAUG00000008550Rbms19668.564ENSORLG00015018208RBMS19967.221Oryzias_latipes_hsok
ENSMAUG00000008550Rbms19668.983ENSOMEG00000002394RBMS19967.619Oryzias_melastigma
ENSMAUG00000008550Rbms19295.200ENSOGAG00000002900RBMS110095.200Otolemur_garnettii
ENSMAUG00000008550Rbms110097.519ENSOARG00000006870RBMS110097.519Ovis_aries
ENSMAUG00000008550Rbms19392.287ENSPPAG00000036520-9992.287Pan_paniscus
ENSMAUG00000008550Rbms19597.215ENSPPAG00000040083RBMS19997.215Pan_paniscus
ENSMAUG00000008550Rbms110096.552ENSPPRG00000005040RBMS110097.027Panthera_pardus
ENSMAUG00000008550Rbms19496.325ENSPTIG00000021240RBMS110097.027Panthera_tigris_altaica
ENSMAUG00000008550Rbms110096.552ENSPTRG00000052304RBMS110096.552Pan_troglodytes
ENSMAUG00000008550Rbms19592.746ENSPTRG00000039358-10092.487Pan_troglodytes
ENSMAUG00000008550Rbms110097.519ENSPANG00000001383RBMS110097.519Papio_anubis
ENSMAUG00000008550Rbms110077.751ENSPKIG00000001498rbms1a10076.773Paramormyrops_kingsleyae
ENSMAUG00000008550Rbms19672.277ENSPKIG00000012818rbms1a10075.309Paramormyrops_kingsleyae
ENSMAUG00000008550Rbms110093.300ENSPSIG00000010240RBMS110093.300Pelodiscus_sinensis
ENSMAUG00000008550Rbms18176.133ENSPMGG00000006310RBMS19567.898Periophthalmus_magnuspinnatus
ENSMAUG00000008550Rbms18660.694ENSPMGG00000004341rbms1a9060.580Periophthalmus_magnuspinnatus
ENSMAUG00000008550Rbms110099.256ENSPEMG00000009449Rbms110099.256Peromyscus_maniculatus_bairdii
ENSMAUG00000008550Rbms110094.789ENSPCIG00000018405RBMS110094.789Phascolarctos_cinereus
ENSMAUG00000008550Rbms18964.444ENSPFOG00000016116rbms1a8965.116Poecilia_formosa
ENSMAUG00000008550Rbms110069.834ENSPFOG00000017483RBMS110069.834Poecilia_formosa
ENSMAUG00000008550Rbms18964.444ENSPLAG00000013864rbms1a8965.116Poecilia_latipinna
ENSMAUG00000008550Rbms110068.884ENSPLAG00000000920RBMS110070.071Poecilia_latipinna
ENSMAUG00000008550Rbms19958.738ENSPMEG00000016185rbms1a8965.116Poecilia_mexicana
ENSMAUG00000008550Rbms110069.834ENSPMEG00000015838RBMS110069.834Poecilia_mexicana
ENSMAUG00000008550Rbms110070.071ENSPREG00000008146RBMS110070.071Poecilia_reticulata
ENSMAUG00000008550Rbms18964.444ENSPREG00000020161rbms1a8965.116Poecilia_reticulata
ENSMAUG00000008550Rbms110092.654ENSPPYG00000012879-10092.654Pongo_abelii
ENSMAUG00000008550Rbms110089.901ENSPCAG00000009673RBMS110089.901Procavia_capensis
ENSMAUG00000008550Rbms110096.552ENSPCOG00000027294RBMS110097.027Propithecus_coquereli
ENSMAUG00000008550Rbms18898.157ENSPVAG00000010429RBMS18798.157Pteropus_vampyrus
ENSMAUG00000008550Rbms110070.714ENSPNYG00000002643RBMS110070.714Pundamilia_nyererei
ENSMAUG00000008550Rbms110075.000ENSPNAG00000023479RBMS110076.225Pygocentrus_nattereri
ENSMAUG00000008550Rbms18773.295ENSPNAG00000010225rbms1a8873.295Pygocentrus_nattereri
ENSMAUG00000008550Rbms110097.767ENSRNOG00000008482Rbms110097.767Rattus_norvegicus
ENSMAUG00000008550Rbms110096.552ENSRBIG00000044262RBMS110096.552Rhinopithecus_bieti
ENSMAUG00000008550Rbms110095.714ENSRROG00000043108RBMS110095.714Rhinopithecus_roxellana
ENSMAUG00000008550Rbms19396.658ENSSBOG00000034705RBMS110096.658Saimiri_boliviensis_boliviensis
ENSMAUG00000008550Rbms110094.541ENSSHAG00000012271RBMS110094.541Sarcophilus_harrisii
ENSMAUG00000008550Rbms18778.693ENSSFOG00015014493rbms1a9578.693Scleropages_formosus
ENSMAUG00000008550Rbms19979.703ENSSFOG00015022929rbms19979.703Scleropages_formosus
ENSMAUG00000008550Rbms110071.496ENSSMAG00000012152RBMS19671.496Scophthalmus_maximus
ENSMAUG00000008550Rbms18664.058ENSSMAG00000012722rbms1a9564.244Scophthalmus_maximus
ENSMAUG00000008550Rbms18964.444ENSSDUG00000020602rbms1a9565.116Seriola_dumerili
ENSMAUG00000008550Rbms110072.209ENSSDUG00000018803RBMS110072.209Seriola_dumerili
ENSMAUG00000008550Rbms18964.444ENSSLDG00000009495rbms1a8965.116Seriola_lalandi_dorsalis
ENSMAUG00000008550Rbms110071.971ENSSLDG00000016556RBMS110071.971Seriola_lalandi_dorsalis
ENSMAUG00000008550Rbms110067.980ENSSARG00000011085RBMS110067.980Sorex_araneus
ENSMAUG00000008550Rbms18792.045ENSSPUG00000017163RBMS19492.045Sphenodon_punctatus
ENSMAUG00000008550Rbms19958.252ENSSPAG00000005371rbms1a8964.535Stegastes_partitus
ENSMAUG00000008550Rbms110072.922ENSSPAG00000000059RBMS110072.922Stegastes_partitus
ENSMAUG00000008550Rbms110093.795ENSSSCG00000015888RBMS110093.795Sus_scrofa
ENSMAUG00000008550Rbms110093.052ENSTGUG00000006606RBMS110093.052Taeniopygia_guttata
ENSMAUG00000008550Rbms110066.903ENSTRUG00000005466-9672.280Takifugu_rubripes
ENSMAUG00000008550Rbms18563.743ENSTRUG00000017155rbms1a8963.663Takifugu_rubripes
ENSMAUG00000008550Rbms18762.108ENSTNIG00000009477rbms1a9962.346Tetraodon_nigroviridis
ENSMAUG00000008550Rbms19374.005ENSTNIG00000016496RBMS19776.136Tetraodon_nigroviridis
ENSMAUG00000008550Rbms19486.089ENSTBEG00000016156RBMS110086.089Tupaia_belangeri
ENSMAUG00000008550Rbms19496.063ENSTTRG00000011058RBMS110096.063Tursiops_truncatus
ENSMAUG00000008550Rbms110097.022ENSUAMG00000022331RBMS110097.022Ursus_americanus
ENSMAUG00000008550Rbms19596.482ENSUMAG00000008605RBMS19996.482Ursus_maritimus
ENSMAUG00000008550Rbms19495.276ENSVPAG00000002716RBMS110095.276Vicugna_pacos
ENSMAUG00000008550Rbms110093.795ENSVVUG00000018682RBMS110097.668Vulpes_vulpes
ENSMAUG00000008550Rbms19481.984ENSXETG00000016204rbms110081.201Xenopus_tropicalis
ENSMAUG00000008550Rbms18775.000ENSXCOG00000000211RBMS19575.000Xiphophorus_couchianus
ENSMAUG00000008550Rbms18961.389ENSXCOG00000001659rbms1a8961.919Xiphophorus_couchianus
ENSMAUG00000008550Rbms110069.834ENSXMAG00000011405RBMS110069.834Xiphophorus_maculatus
ENSMAUG00000008550Rbms18964.444ENSXMAG00000001802rbms1a8965.116Xiphophorus_maculatus

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