EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000008799 (Gene tree)
Gene ID: 101844346
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrKB708131.1:22762219-22762479
Accession: 101844346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000006997	LSM	PF01423.22	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000010803	-	261	XM_005065874	ENSMAUP00000006997	86 (aa)	XP_005065931	A0A1U7Q3J8

Gene Model

Click here to download ENSMAUG00000008799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000008799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000008799	-	97	69.880	ENSMAUG00000010289	-	86	69.444
ENSMAUG00000008799	-	73	93.651	ENSMAUG00000019737	-	85	93.651
ENSMAUG00000008799	-	73	93.651	ENSMAUG00000016909	-	85	93.651
ENSMAUG00000008799	-	77	50.000	ENSMAUG00000014938	Lsm6	83	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000008799	-	87	94.667	ENSG00000139343	SNRPF	87	94.667	Homo_sapiens
ENSMAUG00000008799	-	86	93.243	ENSAPOG00000003377	snrpf	59	92.000	Acanthochromis_polyacanthus
ENSMAUG00000008799	-	86	94.595	ENSAMEG00000002166	-	87	94.595	Ailuropoda_melanoleuca
ENSMAUG00000008799	-	88	81.579	ENSAMEG00000018718	-	87	82.667	Ailuropoda_melanoleuca
ENSMAUG00000008799	-	85	93.151	ENSACIG00000013216	snrpf	86	93.151	Amphilophus_citrinellus
ENSMAUG00000008799	-	85	93.151	ENSAOCG00000015108	snrpf	86	93.151	Amphiprion_ocellaris
ENSMAUG00000008799	-	85	93.151	ENSAPEG00000022022	snrpf	86	93.151	Amphiprion_percula
ENSMAUG00000008799	-	85	93.151	ENSATEG00000022625	snrpf	78	93.151	Anabas_testudineus
ENSMAUG00000008799	-	86	93.243	ENSACAG00000014073	SNRPF	85	93.243	Anolis_carolinensis
ENSMAUG00000008799	-	87	94.667	ENSANAG00000032845	SNRPF	87	94.667	Aotus_nancymaae
ENSMAUG00000008799	-	87	68.000	ENSANAG00000025860	-	85	68.000	Aotus_nancymaae
ENSMAUG00000008799	-	83	85.915	ENSANAG00000020297	-	65	85.915	Aotus_nancymaae
ENSMAUG00000008799	-	85	93.151	ENSACLG00000016066	snrpf	86	93.151	Astatotilapia_calliptera
ENSMAUG00000008799	-	87	90.667	ENSAMXG00000007421	snrpf	87	90.667	Astyanax_mexicanus
ENSMAUG00000008799	-	91	88.462	ENSBTAG00000050012	-	93	88.000	Bos_taurus
ENSMAUG00000008799	-	87	94.667	ENSBTAG00000016271	SNRPF	87	94.667	Bos_taurus
ENSMAUG00000008799	-	90	68.831	WBGene00004918	snr-5	85	70.833	Caenorhabditis_elegans
ENSMAUG00000008799	-	87	94.667	ENSCJAG00000002705	-	87	94.667	Callithrix_jacchus
ENSMAUG00000008799	-	87	94.667	ENSCAFG00000006395	-	68	94.667	Canis_familiaris
ENSMAUG00000008799	-	85	86.301	ENSCAFG00000031151	-	87	86.667	Canis_familiaris
ENSMAUG00000008799	-	85	86.301	ENSCAFG00020010823	-	87	86.667	Canis_lupus_dingo
ENSMAUG00000008799	-	91	83.333	ENSCAFG00020013161	-	74	91.429	Canis_lupus_dingo
ENSMAUG00000008799	-	87	89.474	ENSTSYG00000036502	-	87	89.474	Carlito_syrichta
ENSMAUG00000008799	-	94	88.889	ENSTSYG00000031636	-	61	90.411	Carlito_syrichta
ENSMAUG00000008799	-	87	81.333	ENSTSYG00000030635	-	87	81.333	Carlito_syrichta
ENSMAUG00000008799	-	86	94.595	ENSCAPG00000007242	SNRPF	87	94.595	Cavia_aperea
ENSMAUG00000008799	-	87	94.667	ENSCPOG00000013898	SNRPF	87	94.667	Cavia_porcellus
ENSMAUG00000008799	-	100	83.721	ENSCCAG00000033627	-	59	84.000	Cebus_capucinus
ENSMAUG00000008799	-	100	94.186	ENSCCAG00000017356	-	87	94.667	Cebus_capucinus
ENSMAUG00000008799	-	87	94.667	ENSCCAG00000037378	-	87	94.667	Cebus_capucinus
ENSMAUG00000008799	-	87	94.667	ENSCLAG00000007200	SNRPF	87	94.667	Chinchilla_lanigera
ENSMAUG00000008799	-	87	94.667	ENSCSAG00000003602	-	61	94.667	Chlorocebus_sabaeus
ENSMAUG00000008799	-	74	93.750	ENSCHOG00000009392	SNRPF	100	93.750	Choloepus_hoffmanni
ENSMAUG00000008799	-	100	84.884	ENSCPBG00000026463	-	87	85.333	Chrysemys_picta_bellii
ENSMAUG00000008799	-	87	86.667	ENSCPBG00000006227	-	87	86.667	Chrysemys_picta_bellii
ENSMAUG00000008799	-	99	89.412	ENSCPBG00000024287	-	60	90.541	Chrysemys_picta_bellii
ENSMAUG00000008799	-	100	83.721	ENSCPBG00000001985	-	89	85.333	Chrysemys_picta_bellii
ENSMAUG00000008799	-	99	83.529	ENSCSAVG00000007498	-	84	85.135	Ciona_savignyi
ENSMAUG00000008799	-	87	88.000	ENSCGRG00001008965	-	58	88.000	Cricetulus_griseus_chok1gshd
ENSMAUG00000008799	-	87	94.667	ENSCGRG00001017100	-	87	94.667	Cricetulus_griseus_chok1gshd
ENSMAUG00000008799	-	93	88.750	ENSCGRG00000018878	-	94	88.000	Cricetulus_griseus_crigri
ENSMAUG00000008799	-	87	94.667	ENSCGRG00000000336	-	87	94.667	Cricetulus_griseus_crigri
ENSMAUG00000008799	-	87	92.000	ENSCSEG00000004748	snrpf	87	92.000	Cynoglossus_semilaevis
ENSMAUG00000008799	-	86	93.243	ENSCVAG00000000397	snrpf	59	93.243	Cyprinodon_variegatus
ENSMAUG00000008799	-	87	90.909	ENSDARG00000105037	snrpf	88	90.909	Danio_rerio
ENSMAUG00000008799	-	87	78.667	ENSDNOG00000049373	-	65	78.667	Dasypus_novemcinctus
ENSMAUG00000008799	-	87	93.333	ENSDNOG00000048989	-	67	93.333	Dasypus_novemcinctus
ENSMAUG00000008799	-	69	91.525	ENSDORG00000029740	-	72	91.525	Dipodomys_ordii
ENSMAUG00000008799	-	84	86.111	ENSDORG00000025351	-	100	86.111	Dipodomys_ordii
ENSMAUG00000008799	-	98	73.810	FBgn0000426	SmF	83	76.712	Drosophila_melanogaster
ENSMAUG00000008799	-	87	94.667	ENSETEG00000001558	-	87	94.667	Echinops_telfairi
ENSMAUG00000008799	-	94	71.605	ENSEBUG00000001793	-	72	80.597	Eptatretus_burgeri
ENSMAUG00000008799	-	87	94.667	ENSECAG00000019817	SNRPF	61	94.667	Equus_caballus
ENSMAUG00000008799	-	86	94.595	ENSEEUG00000013509	SNRPF	87	94.595	Erinaceus_europaeus
ENSMAUG00000008799	-	87	90.667	ENSELUG00000003121	RUXF	87	90.667	Esox_lucius
ENSMAUG00000008799	-	100	88.372	ENSELUG00000007737	RUXF	86	89.333	Esox_lucius
ENSMAUG00000008799	-	87	70.667	ENSFCAG00000021942	-	87	70.667	Felis_catus
ENSMAUG00000008799	-	87	94.667	ENSFCAG00000029966	-	87	94.667	Felis_catus
ENSMAUG00000008799	-	98	73.810	ENSFCAG00000031148	-	72	71.795	Felis_catus
ENSMAUG00000008799	-	86	94.595	ENSFALG00000010799	SNRPF	87	93.333	Ficedula_albicollis
ENSMAUG00000008799	-	87	94.667	ENSFDAG00000002831	-	87	94.667	Fukomys_damarensis
ENSMAUG00000008799	-	86	93.243	ENSFHEG00000003240	snrpf	65	93.243	Fundulus_heteroclitus
ENSMAUG00000008799	-	86	93.243	ENSGMOG00000007741	snrpf	87	93.243	Gadus_morhua
ENSMAUG00000008799	-	87	94.667	ENSGALG00000011409	SNRPF	87	94.667	Gallus_gallus
ENSMAUG00000008799	-	85	93.151	ENSGAFG00000016187	snrpf	84	93.151	Gambusia_affinis
ENSMAUG00000008799	-	86	91.892	ENSGACG00000020055	snrpf	87	91.892	Gasterosteus_aculeatus
ENSMAUG00000008799	-	92	86.076	ENSGAGG00000022991	-	80	88.235	Gopherus_agassizii
ENSMAUG00000008799	-	86	87.838	ENSGAGG00000012945	-	69	89.333	Gopherus_agassizii
ENSMAUG00000008799	-	80	81.159	ENSGAGG00000014132	-	83	81.159	Gopherus_agassizii
ENSMAUG00000008799	-	71	93.443	ENSGAGG00000020974	-	51	93.443	Gopherus_agassizii
ENSMAUG00000008799	-	70	85.000	ENSGAGG00000011163	-	86	87.755	Gopherus_agassizii
ENSMAUG00000008799	-	87	94.667	ENSGGOG00000001127	-	87	94.667	Gorilla_gorilla
ENSMAUG00000008799	-	92	72.152	ENSGGOG00000039564	-	90	70.667	Gorilla_gorilla
ENSMAUG00000008799	-	98	76.190	ENSGGOG00000039936	-	83	73.333	Gorilla_gorilla
ENSMAUG00000008799	-	87	94.667	ENSHGLG00000009108	SNRPF	87	94.667	Heterocephalus_glaber_female
ENSMAUG00000008799	-	87	93.333	ENSHGLG00000021172	-	87	93.333	Heterocephalus_glaber_female
ENSMAUG00000008799	-	86	94.595	ENSHGLG00100008103	-	87	94.595	Heterocephalus_glaber_male
ENSMAUG00000008799	-	87	93.333	ENSHGLG00100019596	-	87	93.333	Heterocephalus_glaber_male
ENSMAUG00000008799	-	73	81.429	ENSHCOG00000018663	snrpf	55	81.429	Hippocampus_comes
ENSMAUG00000008799	-	87	93.333	ENSIPUG00000018994	snrpf	87	93.333	Ictalurus_punctatus
ENSMAUG00000008799	-	87	94.667	ENSSTOG00000010434	-	87	94.667	Ictidomys_tridecemlineatus
ENSMAUG00000008799	-	100	80.233	ENSJJAG00000010502	-	89	81.333	Jaculus_jaculus
ENSMAUG00000008799	-	100	76.744	ENSJJAG00000004558	-	89	77.333	Jaculus_jaculus
ENSMAUG00000008799	-	78	88.060	ENSJJAG00000004828	-	86	89.286	Jaculus_jaculus
ENSMAUG00000008799	-	87	94.667	ENSJJAG00000011272	-	87	94.667	Jaculus_jaculus
ENSMAUG00000008799	-	87	92.000	ENSKMAG00000013566	snrpf	87	92.000	Kryptolebias_marmoratus
ENSMAUG00000008799	-	87	92.000	ENSLBEG00000008800	snrpf	87	92.000	Labrus_bergylta
ENSMAUG00000008799	-	87	93.333	ENSLACG00000002456	-	64	93.333	Latimeria_chalumnae
ENSMAUG00000008799	-	87	90.667	ENSLOCG00000015744	snrpf	87	90.667	Lepisosteus_oculatus
ENSMAUG00000008799	-	86	94.595	ENSLAFG00000017426	SNRPF	87	93.333	Loxodonta_africana
ENSMAUG00000008799	-	85	91.781	ENSMAMG00000016593	snrpf	86	91.781	Mastacembelus_armatus
ENSMAUG00000008799	-	85	93.151	ENSMZEG00005014701	snrpf	86	93.151	Maylandia_zebra
ENSMAUG00000008799	-	85	94.521	ENSMGAG00000011453	-	66	94.521	Meleagris_gallopavo
ENSMAUG00000008799	-	87	88.000	ENSMICG00000030494	-	60	88.000	Microcebus_murinus
ENSMAUG00000008799	-	87	94.667	ENSMICG00000012153	-	87	94.667	Microcebus_murinus
ENSMAUG00000008799	-	87	80.000	ENSMOCG00000022166	-	82	80.000	Microtus_ochrogaster
ENSMAUG00000008799	-	79	77.941	ENSMOCG00000020220	-	87	77.941	Microtus_ochrogaster
ENSMAUG00000008799	-	87	94.667	ENSMOCG00000020437	Snrpf	87	94.667	Microtus_ochrogaster
ENSMAUG00000008799	-	86	91.892	ENSMMOG00000007127	snrpf	87	91.892	Mola_mola
ENSMAUG00000008799	-	87	94.667	ENSMODG00000008091	SNRPF	66	94.667	Monodelphis_domestica
ENSMAUG00000008799	-	85	93.151	ENSMALG00000012328	snrpf	86	93.151	Monopterus_albus
ENSMAUG00000008799	-	87	94.667	MGP_CAROLIEiJ_G0015735	-	87	94.667	Mus_caroli
ENSMAUG00000008799	-	87	94.667	ENSMUSG00000020018	Snrpf	87	94.667	Mus_musculus
ENSMAUG00000008799	-	87	94.667	MGP_PahariEiJ_G0031350	Snrpf	87	94.667	Mus_pahari
ENSMAUG00000008799	-	87	94.667	MGP_SPRETEiJ_G0016553	Snrpf	87	94.667	Mus_spretus
ENSMAUG00000008799	-	87	94.667	ENSMPUG00000007176	-	67	94.667	Mustela_putorius_furo
ENSMAUG00000008799	-	86	94.595	ENSMLUG00000013577	-	87	94.595	Myotis_lucifugus
ENSMAUG00000008799	-	87	94.667	ENSMLUG00000029201	-	71	94.667	Myotis_lucifugus
ENSMAUG00000008799	-	87	94.667	ENSMLUG00000026149	-	71	94.667	Myotis_lucifugus
ENSMAUG00000008799	-	100	75.581	ENSMLUG00000026269	-	71	73.333	Myotis_lucifugus
ENSMAUG00000008799	-	87	94.667	ENSMLUG00000027932	-	71	94.667	Myotis_lucifugus
ENSMAUG00000008799	-	87	94.667	ENSNGAG00000024292	-	87	94.667	Nannospalax_galili
ENSMAUG00000008799	-	73	87.302	ENSNGAG00000005851	-	71	86.667	Nannospalax_galili
ENSMAUG00000008799	-	86	93.243	ENSNBRG00000011682	snrpf	76	93.243	Neolamprologus_brichardi
ENSMAUG00000008799	-	86	67.568	ENSMEUG00000000671	SNRPF	87	67.568	Notamacropus_eugenii
ENSMAUG00000008799	-	87	94.667	ENSODEG00000010328	-	87	94.667	Octodon_degus
ENSMAUG00000008799	-	87	93.333	ENSOCUG00000010925	SNRPF	66	93.333	Oryctolagus_cuniculus
ENSMAUG00000008799	-	86	90.541	ENSORLG00020008216	snrpf	87	90.541	Oryzias_latipes_hni
ENSMAUG00000008799	-	86	90.541	ENSORLG00015007418	snrpf	87	90.541	Oryzias_latipes_hsok
ENSMAUG00000008799	-	85	91.781	ENSOMEG00000003018	snrpf	86	91.781	Oryzias_melastigma
ENSMAUG00000008799	-	87	93.333	ENSOGAG00000030323	-	87	93.333	Otolemur_garnettii
ENSMAUG00000008799	-	87	94.667	ENSOARG00000011853	-	65	94.667	Ovis_aries
ENSMAUG00000008799	-	98	76.190	ENSPPAG00000037544	-	83	73.333	Pan_paniscus
ENSMAUG00000008799	-	92	70.886	ENSPPAG00000037479	-	91	69.333	Pan_paniscus
ENSMAUG00000008799	-	87	94.667	ENSPPRG00000005875	-	87	94.667	Panthera_pardus
ENSMAUG00000008799	-	98	72.619	ENSPPRG00000007449	-	77	72.000	Panthera_pardus
ENSMAUG00000008799	-	87	94.667	ENSPTIG00000007520	SNRPF	87	94.667	Panthera_tigris_altaica
ENSMAUG00000008799	-	98	75.000	ENSPTIG00000005117	-	89	72.000	Panthera_tigris_altaica
ENSMAUG00000008799	-	92	70.886	ENSPTRG00000047717	-	91	69.333	Pan_troglodytes
ENSMAUG00000008799	-	98	76.190	ENSPTRG00000043814	-	83	73.333	Pan_troglodytes
ENSMAUG00000008799	-	86	93.243	ENSPKIG00000014784	snrpf	81	93.243	Paramormyrops_kingsleyae
ENSMAUG00000008799	-	86	94.595	ENSPSIG00000016462	SNRPF	87	93.333	Pelodiscus_sinensis
ENSMAUG00000008799	-	86	91.892	ENSPMGG00000023548	snrpf	87	91.892	Periophthalmus_magnuspinnatus
ENSMAUG00000008799	-	87	94.667	ENSPEMG00000023326	Snrpf	87	94.667	Peromyscus_maniculatus_bairdii
ENSMAUG00000008799	-	85	93.151	ENSPLAG00000023932	snrpf	86	93.151	Poecilia_latipinna
ENSMAUG00000008799	-	85	93.151	ENSPMEG00000003377	snrpf	86	93.151	Poecilia_mexicana
ENSMAUG00000008799	-	85	93.151	ENSPREG00000022635	snrpf	84	93.151	Poecilia_reticulata
ENSMAUG00000008799	-	87	94.667	ENSPPYG00000004847	-	87	94.667	Pongo_abelii
ENSMAUG00000008799	-	87	94.667	ENSPCOG00000023833	-	87	94.667	Propithecus_coquereli
ENSMAUG00000008799	-	87	94.667	ENSPVAG00000009036	SNRPF	87	94.667	Pteropus_vampyrus
ENSMAUG00000008799	-	85	93.151	ENSPNYG00000021712	snrpf	86	93.151	Pundamilia_nyererei
ENSMAUG00000008799	-	85	91.781	ENSPNAG00000019117	snrpf	86	91.781	Pygocentrus_nattereri
ENSMAUG00000008799	-	87	94.667	ENSRNOG00000005556	Snrpf	87	94.667	Rattus_norvegicus
ENSMAUG00000008799	-	87	92.000	ENSRBIG00000030414	-	87	92.000	Rhinopithecus_bieti
ENSMAUG00000008799	-	87	92.000	ENSRROG00000021975	-	87	92.000	Rhinopithecus_roxellana
ENSMAUG00000008799	-	81	56.338	YPR182W	SMX3	83	56.338	Saccharomyces_cerevisiae
ENSMAUG00000008799	-	87	94.667	ENSSBOG00000012868	-	87	94.667	Saimiri_boliviensis_boliviensis
ENSMAUG00000008799	-	91	75.309	ENSSBOG00000027638	-	91	75.309	Saimiri_boliviensis_boliviensis
ENSMAUG00000008799	-	87	94.667	ENSSBOG00000036179	-	87	94.667	Saimiri_boliviensis_boliviensis
ENSMAUG00000008799	-	87	82.667	ENSSBOG00000032297	-	86	82.667	Saimiri_boliviensis_boliviensis
ENSMAUG00000008799	-	86	94.595	ENSSHAG00000012294	SNRPF	67	94.595	Sarcophilus_harrisii
ENSMAUG00000008799	-	74	92.188	ENSSFOG00015021523	snrpf	96	92.188	Scleropages_formosus
ENSMAUG00000008799	-	87	90.667	ENSSMAG00000005533	snrpf	86	90.667	Scophthalmus_maximus
ENSMAUG00000008799	-	76	92.308	ENSSDUG00000016283	snrpf	77	92.308	Seriola_dumerili
ENSMAUG00000008799	-	87	92.000	ENSSLDG00000005119	snrpf	87	92.000	Seriola_lalandi_dorsalis
ENSMAUG00000008799	-	93	68.750	ENSSLDG00000003885	-	90	71.622	Seriola_lalandi_dorsalis
ENSMAUG00000008799	-	85	94.521	ENSSPUG00000014590	-	86	94.521	Sphenodon_punctatus
ENSMAUG00000008799	-	86	93.243	ENSSPAG00000003283	snrpf	84	93.243	Stegastes_partitus
ENSMAUG00000008799	-	87	94.667	ENSSSCG00000000895	SNRPF	87	94.667	Sus_scrofa
ENSMAUG00000008799	-	67	89.655	ENSTRUG00000014956	snrpf	84	89.655	Takifugu_rubripes
ENSMAUG00000008799	-	87	92.000	ENSTNIG00000012672	snrpf	87	92.000	Tetraodon_nigroviridis
ENSMAUG00000008799	-	87	68.000	ENSTTRG00000006070	SNRPF	87	68.000	Tursiops_truncatus
ENSMAUG00000008799	-	87	94.667	ENSUAMG00000008176	-	87	94.667	Ursus_americanus
ENSMAUG00000008799	-	100	82.558	ENSUAMG00000001101	-	88	84.000	Ursus_americanus
ENSMAUG00000008799	-	87	84.000	ENSUMAG00000006177	-	88	84.000	Ursus_maritimus
ENSMAUG00000008799	-	87	94.667	ENSUMAG00000003528	-	87	94.667	Ursus_maritimus
ENSMAUG00000008799	-	87	94.667	ENSVPAG00000008712	-	87	94.667	Vicugna_pacos
ENSMAUG00000008799	-	91	87.179	ENSVVUG00000023821	-	96	86.667	Vulpes_vulpes
ENSMAUG00000008799	-	86	72.368	ENSXETG00000021630	snrpf	87	69.737	Xenopus_tropicalis
ENSMAUG00000008799	-	85	93.151	ENSXCOG00000013860	snrpf	84	93.151	Xiphophorus_couchianus
ENSMAUG00000008799	-	85	93.151	ENSXMAG00000015448	snrpf	86	93.151	Xiphophorus_maculatus