EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000009071 (Gene tree)
Gene ID: 101840127
Gene Symbol: Sf3b1
Alias: 2810001M05Rik|Prp10|SAP155|SF3b155|Targ4
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 40960 bases
Position: chrKB708233.1:2985118-3026077
Accession: 101840127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000007485	SF3b1	PF08920.10	3.5e-47	1	1
ENSMAUP00000007497	SF3b1	PF08920.10	4.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000011307	-	3795	-	ENSMAUP00000007497	1264 (aa)	-	-
ENSMAUT00000011295	-	3732	XM_005080910	ENSMAUP00000007485	1243 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000009071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000009071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000009071	Sf3b1	99	95.753	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSMAUG00000009071	Sf3b1	99	89.502	ENSAPOG00000011894	sf3b1	99	89.373	Acanthochromis_polyacanthus
ENSMAUG00000009071	Sf3b1	99	95.542	ENSAMEG00000013809	SF3B1	99	95.542	Ailuropoda_melanoleuca
ENSMAUG00000009071	Sf3b1	99	88.949	ENSACIG00000020910	sf3b1	97	88.088	Amphilophus_citrinellus
ENSMAUG00000009071	Sf3b1	99	89.373	ENSAOCG00000004478	sf3b1	99	89.373	Amphiprion_ocellaris
ENSMAUG00000009071	Sf3b1	99	89.373	ENSAPEG00000012937	sf3b1	99	89.373	Amphiprion_percula
ENSMAUG00000009071	Sf3b1	99	89.494	ENSATEG00000020435	sf3b1	99	89.494	Anabas_testudineus
ENSMAUG00000009071	Sf3b1	99	94.850	ENSAPLG00000003993	SF3B1	99	94.696	Anas_platyrhynchos
ENSMAUG00000009071	Sf3b1	99	94.672	ENSACAG00000009612	SF3B1	99	94.517	Anolis_carolinensis
ENSMAUG00000009071	Sf3b1	99	95.753	ENSANAG00000021577	SF3B1	100	95.250	Aotus_nancymaae
ENSMAUG00000009071	Sf3b1	99	88.600	ENSACLG00000023470	sf3b1	99	88.447	Astatotilapia_calliptera
ENSMAUG00000009071	Sf3b1	99	89.901	ENSAMXG00000002219	sf3b1	99	89.748	Astyanax_mexicanus
ENSMAUG00000009071	Sf3b1	99	95.676	ENSBTAG00000008915	SF3B1	99	95.676	Bos_taurus
ENSMAUG00000009071	Sf3b1	98	63.396	WBGene00011605	sftb-1	98	62.066	Caenorhabditis_elegans
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCJAG00000003902	SF3B1	99	95.753	Callithrix_jacchus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCAFG00000010826	SF3B1	99	95.753	Canis_familiaris
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCAFG00020004750	SF3B1	99	95.753	Canis_lupus_dingo
ENSMAUG00000009071	Sf3b1	99	95.676	ENSCHIG00000015226	SF3B1	99	95.676	Capra_hircus
ENSMAUG00000009071	Sf3b1	99	95.676	ENSTSYG00000009214	SF3B1	99	95.676	Carlito_syrichta
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCAPG00000006547	SF3B1	99	95.753	Cavia_aperea
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCPOG00000009353	SF3B1	100	95.750	Cavia_porcellus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCCAG00000020506	SF3B1	99	95.753	Cebus_capucinus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCATG00000035735	SF3B1	99	95.753	Cercocebus_atys
ENSMAUG00000009071	Sf3b1	99	95.682	ENSCLAG00000014767	SF3B1	99	95.682	Chinchilla_lanigera
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCSAG00000011505	SF3B1	99	95.753	Chlorocebus_sabaeus
ENSMAUG00000009071	Sf3b1	75	98.462	ENSCHOG00000009860	SF3B1	76	98.462	Choloepus_hoffmanni
ENSMAUG00000009071	Sf3b1	99	94.981	ENSCPBG00000021902	SF3B1	99	94.826	Chrysemys_picta_bellii
ENSMAUG00000009071	Sf3b1	70	75.112	ENSCING00000002558	-	97	75.196	Ciona_intestinalis
ENSMAUG00000009071	Sf3b1	99	76.484	ENSCSAVG00000002559	-	99	75.781	Ciona_savignyi
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCANG00000029415	SF3B1	99	95.753	Colobus_angolensis_palliatus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCGRG00001016990	Sf3b1	99	95.753	Cricetulus_griseus_chok1gshd
ENSMAUG00000009071	Sf3b1	99	95.753	ENSCGRG00000005301	Sf3b1	99	95.753	Cricetulus_griseus_crigri
ENSMAUG00000009071	Sf3b1	99	85.802	ENSCSEG00000003860	sf3b1	99	85.725	Cynoglossus_semilaevis
ENSMAUG00000009071	Sf3b1	95	89.252	ENSCVAG00000003680	sf3b1	99	89.252	Cyprinodon_variegatus
ENSMAUG00000009071	Sf3b1	99	89.373	ENSDARG00000056138	sf3b1	99	89.297	Danio_rerio
ENSMAUG00000009071	Sf3b1	99	95.679	ENSDNOG00000011754	SF3B1	99	95.679	Dasypus_novemcinctus
ENSMAUG00000009071	Sf3b1	99	93.050	ENSDORG00000002399	Sf3b1	100	92.973	Dipodomys_ordii
ENSMAUG00000009071	Sf3b1	99	73.057	FBgn0031266	Sf3b1	99	71.799	Drosophila_melanogaster
ENSMAUG00000009071	Sf3b1	82	94.249	ENSETEG00000009188	SF3B1	100	94.249	Echinops_telfairi
ENSMAUG00000009071	Sf3b1	99	83.282	ENSEBUG00000004325	sf3b1	100	85.677	Eptatretus_burgeri
ENSMAUG00000009071	Sf3b1	99	95.676	ENSEASG00005020159	SF3B1	97	95.676	Equus_asinus_asinus
ENSMAUG00000009071	Sf3b1	99	95.676	ENSECAG00000021657	SF3B1	97	95.676	Equus_caballus
ENSMAUG00000009071	Sf3b1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSMAUG00000009071	Sf3b1	99	88.906	ENSELUG00000005977	sf3b1	97	88.754	Esox_lucius
ENSMAUG00000009071	Sf3b1	99	95.753	ENSFCAG00000005038	SF3B1	99	95.753	Felis_catus
ENSMAUG00000009071	Sf3b1	99	94.850	ENSFALG00000004281	SF3B1	99	94.696	Ficedula_albicollis
ENSMAUG00000009071	Sf3b1	99	95.753	ENSFDAG00000017510	SF3B1	99	95.753	Fukomys_damarensis
ENSMAUG00000009071	Sf3b1	99	88.685	ENSFHEG00000014333	sf3b1	99	88.685	Fundulus_heteroclitus
ENSMAUG00000009071	Sf3b1	99	89.272	ENSGMOG00000006773	sf3b1	99	89.272	Gadus_morhua
ENSMAUG00000009071	Sf3b1	99	95.135	ENSGALG00000008038	SF3B1	99	94.981	Gallus_gallus
ENSMAUG00000009071	Sf3b1	98	89.198	ENSGAFG00000000704	sf3b1	99	89.198	Gambusia_affinis
ENSMAUG00000009071	Sf3b1	99	89.409	ENSGACG00000008839	sf3b1	99	89.409	Gasterosteus_aculeatus
ENSMAUG00000009071	Sf3b1	99	94.981	ENSGAGG00000017478	SF3B1	99	94.826	Gopherus_agassizii
ENSMAUG00000009071	Sf3b1	99	89.352	ENSGGOG00000009264	SF3B1	99	90.000	Gorilla_gorilla
ENSMAUG00000009071	Sf3b1	99	88.659	ENSHBUG00000007705	sf3b1	99	88.506	Haplochromis_burtoni
ENSMAUG00000009071	Sf3b1	99	95.542	ENSHGLG00000008285	-	99	95.542	Heterocephalus_glaber_female
ENSMAUG00000009071	Sf3b1	99	93.543	ENSHGLG00100005535	-	99	93.543	Heterocephalus_glaber_male
ENSMAUG00000009071	Sf3b1	99	88.821	ENSHCOG00000016775	sf3b1	99	88.669	Hippocampus_comes
ENSMAUG00000009071	Sf3b1	99	89.748	ENSIPUG00000013171	sf3b1	99	89.748	Ictalurus_punctatus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSSTOG00000011034	SF3B1	99	95.753	Ictidomys_tridecemlineatus
ENSMAUG00000009071	Sf3b1	98	95.659	ENSJJAG00000010903	Sf3b1	99	95.659	Jaculus_jaculus
ENSMAUG00000009071	Sf3b1	99	88.863	ENSKMAG00000004009	sf3b1	99	88.787	Kryptolebias_marmoratus
ENSMAUG00000009071	Sf3b1	99	89.316	ENSLBEG00000022208	sf3b1	99	89.162	Labrus_bergylta
ENSMAUG00000009071	Sf3b1	99	87.738	ENSLACG00000014832	SF3B1	99	87.738	Latimeria_chalumnae
ENSMAUG00000009071	Sf3b1	99	90.680	ENSLOCG00000003899	sf3b1	99	90.527	Lepisosteus_oculatus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSLAFG00000001956	SF3B1	99	95.753	Loxodonta_africana
ENSMAUG00000009071	Sf3b1	99	95.458	ENSMMUG00000022430	SF3B1	99	95.311	Macaca_mulatta
ENSMAUG00000009071	Sf3b1	99	95.753	ENSMNEG00000042333	SF3B1	100	95.250	Macaca_nemestrina
ENSMAUG00000009071	Sf3b1	94	88.961	ENSMLEG00000026141	SF3B1	98	89.504	Mandrillus_leucophaeus
ENSMAUG00000009071	Sf3b1	99	89.365	ENSMAMG00000010241	sf3b1	99	89.365	Mastacembelus_armatus
ENSMAUG00000009071	Sf3b1	99	88.600	ENSMZEG00005021254	sf3b1	99	88.447	Maylandia_zebra
ENSMAUG00000009071	Sf3b1	99	94.303	ENSMGAG00000007017	SF3B1	99	94.149	Meleagris_gallopavo
ENSMAUG00000009071	Sf3b1	99	95.686	ENSMICG00000013879	SF3B1	99	95.686	Microcebus_murinus
ENSMAUG00000009071	Sf3b1	99	91.000	ENSMOCG00000000455	Sf3b1	99	91.000	Microtus_ochrogaster
ENSMAUG00000009071	Sf3b1	82	88.029	ENSMMOG00000000475	sf3b1	99	88.029	Mola_mola
ENSMAUG00000009071	Sf3b1	99	95.058	ENSMODG00000012275	SF3B1	99	95.058	Monodelphis_domestica
ENSMAUG00000009071	Sf3b1	99	89.288	ENSMALG00000017211	sf3b1	99	89.288	Monopterus_albus
ENSMAUG00000009071	Sf3b1	99	95.753	MGP_CAROLIEiJ_G0014141	Sf3b1	99	95.753	Mus_caroli
ENSMAUG00000009071	Sf3b1	99	95.753	ENSMUSG00000025982	Sf3b1	99	95.753	Mus_musculus
ENSMAUG00000009071	Sf3b1	99	95.753	MGP_SPRETEiJ_G0014947	Sf3b1	99	95.753	Mus_spretus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSMPUG00000007799	SF3B1	99	95.753	Mustela_putorius_furo
ENSMAUG00000009071	Sf3b1	99	94.517	ENSMLUG00000000840	SF3B1	99	94.517	Myotis_lucifugus
ENSMAUG00000009071	Sf3b1	99	95.750	ENSNGAG00000021884	-	99	95.750	Nannospalax_galili
ENSMAUG00000009071	Sf3b1	99	84.816	ENSNBRG00000015816	sf3b1	99	84.816	Neolamprologus_brichardi
ENSMAUG00000009071	Sf3b1	99	95.753	ENSNLEG00000006861	SF3B1	99	95.753	Nomascus_leucogenys
ENSMAUG00000009071	Sf3b1	73	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSMAUG00000009071	Sf3b1	99	83.784	ENSOPRG00000008596	SF3B1	99	83.784	Ochotona_princeps
ENSMAUG00000009071	Sf3b1	99	95.753	ENSODEG00000011153	-	99	95.753	Octodon_degus
ENSMAUG00000009071	Sf3b1	99	88.600	ENSONIG00000013758	sf3b1	99	88.447	Oreochromis_niloticus
ENSMAUG00000009071	Sf3b1	82	93.911	ENSOCUG00000012722	-	96	93.911	Oryctolagus_cuniculus
ENSMAUG00000009071	Sf3b1	99	89.135	ENSORLG00000020219	sf3b1	99	89.135	Oryzias_latipes
ENSMAUG00000009071	Sf3b1	99	89.135	ENSORLG00020001746	sf3b1	99	89.135	Oryzias_latipes_hni
ENSMAUG00000009071	Sf3b1	67	90.952	ENSORLG00015001759	sf3b1	98	90.952	Oryzias_latipes_hsok
ENSMAUG00000009071	Sf3b1	99	89.144	ENSOMEG00000019231	sf3b1	99	89.144	Oryzias_melastigma
ENSMAUG00000009071	Sf3b1	51	83.281	ENSOGAG00000000267	-	100	83.281	Otolemur_garnettii
ENSMAUG00000009071	Sf3b1	99	95.676	ENSOARG00000015374	SF3B1	99	95.676	Ovis_aries
ENSMAUG00000009071	Sf3b1	99	95.753	ENSPPAG00000035007	SF3B1	100	95.462	Pan_paniscus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSPPRG00000009090	SF3B1	99	95.753	Panthera_pardus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSPTIG00000021557	SF3B1	99	95.753	Panthera_tigris_altaica
ENSMAUG00000009071	Sf3b1	99	87.221	ENSPTRG00000012771	SF3B1	99	87.221	Pan_troglodytes
ENSMAUG00000009071	Sf3b1	99	95.753	ENSPANG00000013417	SF3B1	99	95.753	Papio_anubis
ENSMAUG00000009071	Sf3b1	99	90.805	ENSPKIG00000000784	sf3b1	99	90.651	Paramormyrops_kingsleyae
ENSMAUG00000009071	Sf3b1	99	93.241	ENSPSIG00000017222	SF3B1	99	93.088	Pelodiscus_sinensis
ENSMAUG00000009071	Sf3b1	89	89.304	ENSPMGG00000004330	sf3b1	98	89.134	Periophthalmus_magnuspinnatus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSPEMG00000010699	Sf3b1	100	95.753	Peromyscus_maniculatus_bairdii
ENSMAUG00000009071	Sf3b1	99	86.162	ENSPMAG00000001311	sf3b1	99	86.315	Petromyzon_marinus
ENSMAUG00000009071	Sf3b1	100	94.571	ENSPCIG00000010642	SF3B1	100	94.571	Phascolarctos_cinereus
ENSMAUG00000009071	Sf3b1	99	89.076	ENSPFOG00000000073	sf3b1	99	89.076	Poecilia_formosa
ENSMAUG00000009071	Sf3b1	99	89.144	ENSPLAG00000002293	sf3b1	99	89.144	Poecilia_latipinna
ENSMAUG00000009071	Sf3b1	99	89.144	ENSPMEG00000000446	sf3b1	97	89.144	Poecilia_mexicana
ENSMAUG00000009071	Sf3b1	99	89.220	ENSPREG00000019652	sf3b1	99	89.220	Poecilia_reticulata
ENSMAUG00000009071	Sf3b1	99	93.796	ENSPPYG00000013044	SF3B1	96	93.796	Pongo_abelii
ENSMAUG00000009071	Sf3b1	99	95.598	ENSPCAG00000009292	SF3B1	99	95.598	Procavia_capensis
ENSMAUG00000009071	Sf3b1	99	95.676	ENSPCOG00000024074	SF3B1	99	95.676	Propithecus_coquereli
ENSMAUG00000009071	Sf3b1	99	95.753	ENSPVAG00000008302	SF3B1	99	95.753	Pteropus_vampyrus
ENSMAUG00000009071	Sf3b1	99	88.600	ENSPNYG00000014939	sf3b1	99	88.447	Pundamilia_nyererei
ENSMAUG00000009071	Sf3b1	99	89.748	ENSPNAG00000008288	sf3b1	99	89.748	Pygocentrus_nattereri
ENSMAUG00000009071	Sf3b1	99	95.753	ENSRNOG00000013516	Sf3b1	99	95.753	Rattus_norvegicus
ENSMAUG00000009071	Sf3b1	99	92.207	ENSRBIG00000026096	SF3B1	99	92.207	Rhinopithecus_bieti
ENSMAUG00000009071	Sf3b1	99	95.756	ENSRROG00000031308	SF3B1	99	95.756	Rhinopithecus_roxellana
ENSMAUG00000009071	Sf3b1	99	95.753	ENSSBOG00000020080	SF3B1	99	95.753	Saimiri_boliviensis_boliviensis
ENSMAUG00000009071	Sf3b1	99	95.058	ENSSHAG00000017564	SF3B1	99	95.058	Sarcophilus_harrisii
ENSMAUG00000009071	Sf3b1	99	90.367	ENSSFOG00015021535	sf3b1	99	90.520	Scleropages_formosus
ENSMAUG00000009071	Sf3b1	99	88.711	ENSSMAG00000013977	sf3b1	98	88.558	Scophthalmus_maximus
ENSMAUG00000009071	Sf3b1	99	89.135	ENSSDUG00000017422	sf3b1	99	89.135	Seriola_dumerili
ENSMAUG00000009071	Sf3b1	99	89.059	ENSSLDG00000019495	sf3b1	99	89.059	Seriola_lalandi_dorsalis
ENSMAUG00000009071	Sf3b1	74	100.000	ENSSARG00000007016	SF3B1	75	100.000	Sorex_araneus
ENSMAUG00000009071	Sf3b1	99	94.903	ENSSPUG00000000410	SF3B1	99	94.749	Sphenodon_punctatus
ENSMAUG00000009071	Sf3b1	99	89.441	ENSSPAG00000010451	sf3b1	98	89.441	Stegastes_partitus
ENSMAUG00000009071	Sf3b1	90	94.915	ENSSSCG00000016075	SF3B1	100	95.250	Sus_scrofa
ENSMAUG00000009071	Sf3b1	99	95.058	ENSTGUG00000010553	SF3B1	99	94.903	Taeniopygia_guttata
ENSMAUG00000009071	Sf3b1	99	89.212	ENSTRUG00000015534	sf3b1	99	89.059	Takifugu_rubripes
ENSMAUG00000009071	Sf3b1	87	100.000	ENSTBEG00000008714	SF3B1	93	100.000	Tupaia_belangeri
ENSMAUG00000009071	Sf3b1	92	100.000	ENSTTRG00000003414	SF3B1	88	100.000	Tursiops_truncatus
ENSMAUG00000009071	Sf3b1	94	95.230	ENSUAMG00000018506	SF3B1	99	95.530	Ursus_americanus
ENSMAUG00000009071	Sf3b1	99	95.753	ENSUMAG00000020945	SF3B1	99	95.753	Ursus_maritimus
ENSMAUG00000009071	Sf3b1	99	87.568	ENSVPAG00000005798	SF3B1	99	87.568	Vicugna_pacos
ENSMAUG00000009071	Sf3b1	99	95.753	ENSVVUG00000025948	SF3B1	94	95.753	Vulpes_vulpes
ENSMAUG00000009071	Sf3b1	99	92.510	ENSXETG00000013339	sf3b1	99	92.510	Xenopus_tropicalis
ENSMAUG00000009071	Sf3b1	99	85.604	ENSXCOG00000018086	sf3b1	99	85.506	Xiphophorus_couchianus
ENSMAUG00000009071	Sf3b1	99	89.144	ENSXMAG00000007369	sf3b1	99	89.388	Xiphophorus_maculatus