EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000009490 (Gene tree)
Gene ID: 101827917
Gene Symbol: Slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 12238 bases
Position: chrKB708142.1:20908591-20920828
Accession: 101827917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000007960	SLBP_RNA_bind	PF15247.6	4.6e-29	1	1
ENSMAUP00000007955	SLBP_RNA_bind	PF15247.6	5.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000011771	-	1721	XM_005068894	ENSMAUP00000007955	275 (aa)	XP_005068951	A0A1U7QJK7
ENSMAUT00000011776	-	768	-	ENSMAUP00000007960	255 (aa)	-	UPI00035A209F

Gene Model

Click here to download ENSMAUG00000009490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000009490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000009490	Slbp	100	86.909	ENSG00000163950	SLBP	100	86.182	Homo_sapiens
ENSMAUG00000009490	Slbp	89	48.736	ENSAPOG00000004953	slbp	96	49.270	Acanthochromis_polyacanthus
ENSMAUG00000009490	Slbp	79	94.470	ENSAMEG00000016915	SLBP	100	94.470	Ailuropoda_melanoleuca
ENSMAUG00000009490	Slbp	83	53.012	ENSACIG00000022308	slbp	94	51.429	Amphilophus_citrinellus
ENSMAUG00000009490	Slbp	94	48.227	ENSAOCG00000024545	slbp	93	48.387	Amphiprion_ocellaris
ENSMAUG00000009490	Slbp	89	49.458	ENSAPEG00000017629	slbp	93	49.104	Amphiprion_percula
ENSMAUG00000009490	Slbp	88	50.000	ENSATEG00000016358	slbp	79	56.195	Anabas_testudineus
ENSMAUG00000009490	Slbp	79	75.000	ENSAPLG00000015989	-	100	79.545	Anas_platyrhynchos
ENSMAUG00000009490	Slbp	100	84.043	ENSANAG00000034769	SLBP	100	83.333	Aotus_nancymaae
ENSMAUG00000009490	Slbp	82	51.394	ENSACLG00000007036	-	78	53.881	Astatotilapia_calliptera
ENSMAUG00000009490	Slbp	84	56.452	ENSAMXG00000014527	slbp	77	63.333	Astyanax_mexicanus
ENSMAUG00000009490	Slbp	100	86.182	ENSBTAG00000001328	SLBP	100	86.182	Bos_taurus
ENSMAUG00000009490	Slbp	100	82.624	ENSCJAG00000001790	SLBP	100	82.624	Callithrix_jacchus
ENSMAUG00000009490	Slbp	100	87.273	ENSCAFG00000015016	SLBP	100	87.273	Canis_familiaris
ENSMAUG00000009490	Slbp	100	87.273	ENSCAFG00020012334	SLBP	100	87.273	Canis_lupus_dingo
ENSMAUG00000009490	Slbp	100	85.818	ENSCHIG00000019364	SLBP	100	85.818	Capra_hircus
ENSMAUG00000009490	Slbp	100	88.000	ENSTSYG00000000376	SLBP	100	86.909	Carlito_syrichta
ENSMAUG00000009490	Slbp	66	90.055	ENSCAPG00000016340	SLBP	100	90.055	Cavia_aperea
ENSMAUG00000009490	Slbp	100	84.946	ENSCPOG00000000031	SLBP	100	84.946	Cavia_porcellus
ENSMAUG00000009490	Slbp	62	84.762	ENSCCAG00000026134	SLBP	85	82.857	Cebus_capucinus
ENSMAUG00000009490	Slbp	100	86.909	ENSCATG00000029173	SLBP	100	86.182	Cercocebus_atys
ENSMAUG00000009490	Slbp	100	85.818	ENSCLAG00000008157	SLBP	100	85.818	Chinchilla_lanigera
ENSMAUG00000009490	Slbp	100	72.857	ENSCSAG00000015628	SLBP	100	72.857	Chlorocebus_sabaeus
ENSMAUG00000009490	Slbp	100	72.340	ENSCPBG00000000746	SLBP	100	72.340	Chrysemys_picta_bellii
ENSMAUG00000009490	Slbp	79	89.352	ENSCANG00000041008	SLBP	100	88.426	Colobus_angolensis_palliatus
ENSMAUG00000009490	Slbp	100	98.545	ENSCGRG00001009760	-	100	98.545	Cricetulus_griseus_chok1gshd
ENSMAUG00000009490	Slbp	100	94.909	ENSCGRG00001012991	-	100	94.909	Cricetulus_griseus_chok1gshd
ENSMAUG00000009490	Slbp	100	98.545	ENSCGRG00000004506	Slbp	100	98.545	Cricetulus_griseus_crigri
ENSMAUG00000009490	Slbp	88	50.000	ENSCSEG00000020337	-	81	54.667	Cynoglossus_semilaevis
ENSMAUG00000009490	Slbp	76	54.260	ENSCVAG00000019592	-	81	54.545	Cyprinodon_variegatus
ENSMAUG00000009490	Slbp	84	54.618	ENSDARG00000100558	slbp	70	60.000	Danio_rerio
ENSMAUG00000009490	Slbp	100	78.799	ENSDNOG00000047539	SLBP	100	78.799	Dasypus_novemcinctus
ENSMAUG00000009490	Slbp	79	91.667	ENSDORG00000003028	Slbp	100	91.667	Dipodomys_ordii
ENSMAUG00000009490	Slbp	86	79.916	ENSETEG00000004641	SLBP	99	79.916	Echinops_telfairi
ENSMAUG00000009490	Slbp	70	92.708	ENSEASG00005022714	SLBP	100	92.708	Equus_asinus_asinus
ENSMAUG00000009490	Slbp	87	80.753	ENSECAG00000011689	SLBP	69	90.000	Equus_caballus
ENSMAUG00000009490	Slbp	95	45.936	ENSELUG00000012854	slbp	99	49.117	Esox_lucius
ENSMAUG00000009490	Slbp	100	88.364	ENSFCAG00000000169	SLBP	100	88.364	Felis_catus
ENSMAUG00000009490	Slbp	100	69.751	ENSFALG00000010003	-	100	69.395	Ficedula_albicollis
ENSMAUG00000009490	Slbp	92	90.119	ENSFDAG00000007592	SLBP	99	90.119	Fukomys_damarensis
ENSMAUG00000009490	Slbp	85	49.020	ENSFHEG00000007497	slbp	80	51.613	Fundulus_heteroclitus
ENSMAUG00000009490	Slbp	53	71.333	ENSGMOG00000015352	slbp	96	71.333	Gadus_morhua
ENSMAUG00000009490	Slbp	100	71.530	ENSGALG00000015712	SLBP	100	71.530	Gallus_gallus
ENSMAUG00000009490	Slbp	85	51.737	ENSGAFG00000019577	slbp	84	54.751	Gambusia_affinis
ENSMAUG00000009490	Slbp	89	48.837	ENSGACG00000019596	slbp	86	54.460	Gasterosteus_aculeatus
ENSMAUG00000009490	Slbp	86	68.443	ENSGAGG00000012096	SLBP	91	72.687	Gopherus_agassizii
ENSMAUG00000009490	Slbp	100	86.909	ENSGGOG00000003167	SLBP	100	86.182	Gorilla_gorilla
ENSMAUG00000009490	Slbp	82	51.969	ENSHBUG00000003338	-	78	53.881	Haplochromis_burtoni
ENSMAUG00000009490	Slbp	100	76.364	ENSHGLG00000005955	-	100	76.364	Heterocephalus_glaber_female
ENSMAUG00000009490	Slbp	84	84.475	ENSHGLG00000010461	-	96	84.483	Heterocephalus_glaber_female
ENSMAUG00000009490	Slbp	89	85.088	ENSHGLG00000008313	-	100	81.176	Heterocephalus_glaber_female
ENSMAUG00000009490	Slbp	84	84.475	ENSHGLG00100014906	-	96	84.483	Heterocephalus_glaber_male
ENSMAUG00000009490	Slbp	100	87.636	ENSHGLG00100014018	-	100	87.636	Heterocephalus_glaber_male
ENSMAUG00000009490	Slbp	89	85.965	ENSHGLG00100010510	-	100	81.961	Heterocephalus_glaber_male
ENSMAUG00000009490	Slbp	89	47.925	ENSHCOG00000013425	slbp	94	47.692	Hippocampus_comes
ENSMAUG00000009490	Slbp	70	67.172	ENSIPUG00000016780	slbp	74	67.172	Ictalurus_punctatus
ENSMAUG00000009490	Slbp	100	90.909	ENSSTOG00000003262	SLBP	100	90.909	Ictidomys_tridecemlineatus
ENSMAUG00000009490	Slbp	100	92.000	ENSJJAG00000020549	-	100	92.000	Jaculus_jaculus
ENSMAUG00000009490	Slbp	100	90.909	ENSJJAG00000002394	-	100	90.909	Jaculus_jaculus
ENSMAUG00000009490	Slbp	86	50.373	ENSKMAG00000008187	slbp	83	52.790	Kryptolebias_marmoratus
ENSMAUG00000009490	Slbp	84	51.373	ENSLBEG00000024709	slbp	76	55.924	Labrus_bergylta
ENSMAUG00000009490	Slbp	95	55.882	ENSLACG00000014623	SLBP	96	55.515	Latimeria_chalumnae
ENSMAUG00000009490	Slbp	95	50.175	ENSLOCG00000011027	slbp	95	52.797	Lepisosteus_oculatus
ENSMAUG00000009490	Slbp	86	84.774	ENSLAFG00000012933	SLBP	100	84.774	Loxodonta_africana
ENSMAUG00000009490	Slbp	91	87.649	ENSMFAG00000030130	SLBP	81	86.719	Macaca_fascicularis
ENSMAUG00000009490	Slbp	93	84.791	ENSMMUG00000032303	SLBP	96	88.940	Macaca_mulatta
ENSMAUG00000009490	Slbp	100	67.730	ENSMNEG00000008082	SLBP	100	67.021	Macaca_nemestrina
ENSMAUG00000009490	Slbp	93	79.608	ENSMLEG00000024639	SLBP	98	78.824	Mandrillus_leucophaeus
ENSMAUG00000009490	Slbp	88	46.442	ENSMAMG00000001046	-	93	46.591	Mastacembelus_armatus
ENSMAUG00000009490	Slbp	82	51.969	ENSMZEG00005017261	-	78	53.881	Maylandia_zebra
ENSMAUG00000009490	Slbp	79	79.263	ENSMGAG00000013085	SLBP	100	79.263	Meleagris_gallopavo
ENSMAUG00000009490	Slbp	100	86.909	ENSMICG00000014244	SLBP	100	85.818	Microcebus_murinus
ENSMAUG00000009490	Slbp	100	96.727	ENSMOCG00000015826	Slbp	99	96.727	Microtus_ochrogaster
ENSMAUG00000009490	Slbp	85	52.282	ENSMMOG00000010181	slbp	93	49.789	Mola_mola
ENSMAUG00000009490	Slbp	93	81.226	ENSMODG00000004304	SLBP	100	81.226	Monodelphis_domestica
ENSMAUG00000009490	Slbp	89	46.953	ENSMALG00000013883	-	59	53.509	Monopterus_albus
ENSMAUG00000009490	Slbp	100	95.273	MGP_CAROLIEiJ_G0027117	Slbp	100	95.273	Mus_caroli
ENSMAUG00000009490	Slbp	100	95.636	ENSMUSG00000004642	Slbp	100	95.636	Mus_musculus
ENSMAUG00000009490	Slbp	100	95.636	MGP_PahariEiJ_G0016901	Slbp	100	95.636	Mus_pahari
ENSMAUG00000009490	Slbp	100	95.636	MGP_SPRETEiJ_G0028113	Slbp	100	95.636	Mus_spretus
ENSMAUG00000009490	Slbp	67	91.848	ENSMPUG00000011139	SLBP	94	91.848	Mustela_putorius_furo
ENSMAUG00000009490	Slbp	79	88.532	ENSMLUG00000004425	SLBP	93	88.532	Myotis_lucifugus
ENSMAUG00000009490	Slbp	100	90.182	ENSNGAG00000020799	Slbp	100	90.182	Nannospalax_galili
ENSMAUG00000009490	Slbp	80	52.066	ENSNBRG00000006044	-	87	52.609	Neolamprologus_brichardi
ENSMAUG00000009490	Slbp	100	84.752	ENSNLEG00000000048	SLBP	100	84.043	Nomascus_leucogenys
ENSMAUG00000009490	Slbp	65	87.640	ENSMEUG00000002501	SLBP	100	87.640	Notamacropus_eugenii
ENSMAUG00000009490	Slbp	100	85.455	ENSODEG00000012641	SLBP	100	85.455	Octodon_degus
ENSMAUG00000009490	Slbp	82	51.969	ENSONIG00000017469	-	78	54.338	Oreochromis_niloticus
ENSMAUG00000009490	Slbp	79	85.714	ENSOANG00000014243	SLBP	95	85.714	Ornithorhynchus_anatinus
ENSMAUG00000009490	Slbp	84	51.029	ENSORLG00000024887	-	89	47.699	Oryzias_latipes
ENSMAUG00000009490	Slbp	84	50.617	ENSORLG00020007798	slbp	77	50.962	Oryzias_latipes_hni
ENSMAUG00000009490	Slbp	84	51.440	ENSORLG00015016656	slbp	73	53.769	Oryzias_latipes_hsok
ENSMAUG00000009490	Slbp	84	50.617	ENSOMEG00000010818	slbp	77	54.762	Oryzias_melastigma
ENSMAUG00000009490	Slbp	100	86.182	ENSOGAG00000009750	SLBP	100	85.455	Otolemur_garnettii
ENSMAUG00000009490	Slbp	79	91.244	ENSOARG00000016090	SLBP	100	91.244	Ovis_aries
ENSMAUG00000009490	Slbp	100	87.273	ENSPPAG00000033300	SLBP	100	86.545	Pan_paniscus
ENSMAUG00000009490	Slbp	91	89.600	ENSPPRG00000016897	SLBP	100	89.600	Panthera_pardus
ENSMAUG00000009490	Slbp	70	92.708	ENSPTIG00000015057	SLBP	100	92.708	Panthera_tigris_altaica
ENSMAUG00000009490	Slbp	100	86.909	ENSPTRG00000015832	SLBP	100	86.182	Pan_troglodytes
ENSMAUG00000009490	Slbp	100	83.099	ENSPANG00000004932	SLBP	100	82.394	Papio_anubis
ENSMAUG00000009490	Slbp	88	52.874	ENSPKIG00000006183	slbp	94	51.648	Paramormyrops_kingsleyae
ENSMAUG00000009490	Slbp	80	51.542	ENSPMGG00000017684	-	88	59.887	Periophthalmus_magnuspinnatus
ENSMAUG00000009490	Slbp	100	97.818	ENSPEMG00000018369	Slbp	100	97.818	Peromyscus_maniculatus_bairdii
ENSMAUG00000009490	Slbp	100	75.254	ENSPCIG00000013575	SLBP	86	75.254	Phascolarctos_cinereus
ENSMAUG00000009490	Slbp	85	51.163	ENSPFOG00000000462	slbp	80	54.751	Poecilia_formosa
ENSMAUG00000009490	Slbp	85	51.550	ENSPLAG00000008300	slbp	84	52.679	Poecilia_latipinna
ENSMAUG00000009490	Slbp	85	51.163	ENSPMEG00000020807	slbp	80	54.751	Poecilia_mexicana
ENSMAUG00000009490	Slbp	85	51.163	ENSPREG00000004561	slbp	80	54.751	Poecilia_reticulata
ENSMAUG00000009490	Slbp	100	87.273	ENSPPYG00000014529	SLBP	100	86.545	Pongo_abelii
ENSMAUG00000009490	Slbp	100	87.636	ENSPCOG00000017399	SLBP	100	86.545	Propithecus_coquereli
ENSMAUG00000009490	Slbp	100	81.091	ENSPVAG00000002807	SLBP	100	81.091	Pteropus_vampyrus
ENSMAUG00000009490	Slbp	82	51.969	ENSPNYG00000005451	-	78	53.881	Pundamilia_nyererei
ENSMAUG00000009490	Slbp	82	58.750	ENSPNAG00000018503	slbp	89	58.750	Pygocentrus_nattereri
ENSMAUG00000009490	Slbp	100	95.273	ENSRNOG00000037162	Slbp	100	95.273	Rattus_norvegicus
ENSMAUG00000009490	Slbp	100	86.909	ENSRBIG00000039159	SLBP	100	86.182	Rhinopithecus_bieti
ENSMAUG00000009490	Slbp	96	85.985	ENSRROG00000030081	SLBP	97	85.227	Rhinopithecus_roxellana
ENSMAUG00000009490	Slbp	70	89.062	ENSSBOG00000033897	SLBP	100	88.021	Saimiri_boliviensis_boliviensis
ENSMAUG00000009490	Slbp	100	74.582	ENSSHAG00000013939	SLBP	100	74.582	Sarcophilus_harrisii
ENSMAUG00000009490	Slbp	85	57.200	ENSSFOG00015019429	slbp	89	55.600	Scleropages_formosus
ENSMAUG00000009490	Slbp	77	50.840	ENSSMAG00000016028	-	82	51.064	Scophthalmus_maximus
ENSMAUG00000009490	Slbp	85	50.000	ENSSDUG00000000855	-	82	53.947	Seriola_dumerili
ENSMAUG00000009490	Slbp	50	53.333	ENSSLDG00000022893	-	86	53.741	Seriola_lalandi_dorsalis
ENSMAUG00000009490	Slbp	74	41.546	ENSSLDG00000007554	-	71	41.546	Seriola_lalandi_dorsalis
ENSMAUG00000009490	Slbp	97	67.537	ENSSPUG00000016007	SLBP	98	67.537	Sphenodon_punctatus
ENSMAUG00000009490	Slbp	82	51.190	ENSSPAG00000004021	slbp	81	56.938	Stegastes_partitus
ENSMAUG00000009490	Slbp	100	84.727	ENSSSCG00000008676	SLBP	100	84.727	Sus_scrofa
ENSMAUG00000009490	Slbp	93	72.031	ENSTGUG00000010626	-	100	71.648	Taeniopygia_guttata
ENSMAUG00000009490	Slbp	91	50.000	ENSTRUG00000000688	slbp	91	51.587	Takifugu_rubripes
ENSMAUG00000009490	Slbp	88	46.923	ENSTNIG00000000484	-	82	48.636	Tetraodon_nigroviridis
ENSMAUG00000009490	Slbp	68	94.118	ENSTBEG00000004085	SLBP	100	68.110	Tupaia_belangeri
ENSMAUG00000009490	Slbp	79	93.519	ENSTTRG00000010901	-	100	93.519	Tursiops_truncatus
ENSMAUG00000009490	Slbp	65	88.202	ENSTTRG00000004010	-	100	88.202	Tursiops_truncatus
ENSMAUG00000009490	Slbp	100	88.087	ENSUAMG00000012990	SLBP	100	88.087	Ursus_americanus
ENSMAUG00000009490	Slbp	70	92.708	ENSUMAG00000006119	SLBP	100	92.708	Ursus_maritimus
ENSMAUG00000009490	Slbp	100	86.545	ENSVVUG00000015578	-	100	86.545	Vulpes_vulpes
ENSMAUG00000009490	Slbp	89	56.746	ENSXETG00000003876	slbp	93	58.893	Xenopus_tropicalis
ENSMAUG00000009490	Slbp	75	54.425	ENSXCOG00000008275	slbp	84	54.709	Xiphophorus_couchianus
ENSMAUG00000009490	Slbp	85	51.163	ENSXMAG00000001331	-	79	54.751	Xiphophorus_maculatus