EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000009743 (Gene tree)
Gene ID: 101829891
Gene Symbol: Synj1
Alias: A930006D20Rik
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 73077 bases
Position: chrKB708169.1:6907354-6980430
Accession: 101829891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000008297	Exo_endo_phos	PF03372.23	5.8e-15	1	1
ENSMAUP00000008305	Exo_endo_phos	PF03372.23	1.2e-07	1	1
ENSMAUP00000008297	DUF1866	PF08952.11	6.2e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012124	-	6670	-	ENSMAUP00000008305	693 (aa)	-	-
ENSMAUT00000012116	-	4149	XM_005073817	ENSMAUP00000008297	1308 (aa)	XP_005073874	-

Gene Model

Click here to download ENSMAUG00000009743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000009743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000009743	Synj1	100	58.621	ENSMAUG00000022212	Synj2	90	59.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000009743	Synj1	100	96.537	ENSG00000159082	SYNJ1	99	96.537	Homo_sapiens
ENSMAUG00000009743	Synj1	100	83.022	ENSAPOG00000002809	synj1	92	71.063	Acanthochromis_polyacanthus
ENSMAUG00000009743	Synj1	100	94.864	ENSAMEG00000015028	SYNJ1	81	92.868	Ailuropoda_melanoleuca
ENSMAUG00000009743	Synj1	100	78.849	ENSACIG00000008857	synj1	98	66.968	Amphilophus_citrinellus
ENSMAUG00000009743	Synj1	100	82.446	ENSAOCG00000009835	synj1	98	67.375	Amphiprion_ocellaris
ENSMAUG00000009743	Synj1	100	82.446	ENSAPEG00000021010	synj1	73	68.111	Amphiprion_percula
ENSMAUG00000009743	Synj1	100	82.158	ENSATEG00000002306	synj1	73	68.012	Anabas_testudineus
ENSMAUG00000009743	Synj1	100	91.051	ENSAPLG00000011832	SYNJ1	83	84.470	Anas_platyrhynchos
ENSMAUG00000009743	Synj1	100	89.729	ENSACAG00000003006	-	100	82.864	Anolis_carolinensis
ENSMAUG00000009743	Synj1	100	96.248	ENSANAG00000027325	SYNJ1	100	92.302	Aotus_nancymaae
ENSMAUG00000009743	Synj1	100	82.158	ENSACLG00000002255	synj1	100	66.498	Astatotilapia_calliptera
ENSMAUG00000009743	Synj1	100	82.759	ENSAMXG00000008208	synj1	77	68.055	Astyanax_mexicanus
ENSMAUG00000009743	Synj1	100	96.825	ENSBTAG00000003063	SYNJ1	100	91.585	Bos_taurus
ENSMAUG00000009743	Synj1	100	96.825	ENSCJAG00000009187	SYNJ1	100	92.302	Callithrix_jacchus
ENSMAUG00000009743	Synj1	100	96.104	ENSCAFG00000009041	SYNJ1	99	86.707	Canis_familiaris
ENSMAUG00000009743	Synj1	100	96.537	ENSCAFG00020025776	SYNJ1	98	87.252	Canis_lupus_dingo
ENSMAUG00000009743	Synj1	100	96.681	ENSCHIG00000005095	SYNJ1	84	89.655	Capra_hircus
ENSMAUG00000009743	Synj1	100	96.248	ENSTSYG00000014541	SYNJ1	100	91.533	Carlito_syrichta
ENSMAUG00000009743	Synj1	89	87.081	ENSCAPG00000014483	SYNJ1	84	78.351	Cavia_aperea
ENSMAUG00000009743	Synj1	100	96.681	ENSCPOG00000012182	SYNJ1	100	92.906	Cavia_porcellus
ENSMAUG00000009743	Synj1	100	96.248	ENSCCAG00000020825	SYNJ1	100	92.073	Cebus_capucinus
ENSMAUG00000009743	Synj1	100	96.681	ENSCATG00000033891	SYNJ1	100	92.372	Cercocebus_atys
ENSMAUG00000009743	Synj1	100	96.392	ENSCLAG00000009796	SYNJ1	100	96.392	Chinchilla_lanigera
ENSMAUG00000009743	Synj1	100	95.007	ENSCSAG00000009654	SYNJ1	100	93.364	Chlorocebus_sabaeus
ENSMAUG00000009743	Synj1	83	97.872	ENSCHOG00000012390	SYNJ1	68	90.228	Choloepus_hoffmanni
ENSMAUG00000009743	Synj1	100	93.074	ENSCPBG00000006402	SYNJ1	97	86.812	Chrysemys_picta_bellii
ENSMAUG00000009743	Synj1	100	96.681	ENSCANG00000031359	SYNJ1	100	92.372	Colobus_angolensis_palliatus
ENSMAUG00000009743	Synj1	100	97.980	ENSCGRG00001010861	Synj1	100	97.095	Cricetulus_griseus_chok1gshd
ENSMAUG00000009743	Synj1	100	97.980	ENSCGRG00000015749	Synj1	100	97.980	Cricetulus_griseus_crigri
ENSMAUG00000009743	Synj1	100	80.939	ENSCSEG00000019614	synj1	99	67.955	Cynoglossus_semilaevis
ENSMAUG00000009743	Synj1	100	77.229	ENSCVAG00000019250	synj1	93	67.582	Cyprinodon_variegatus
ENSMAUG00000009743	Synj1	100	81.650	ENSDARG00000025011	synj1	100	68.741	Danio_rerio
ENSMAUG00000009743	Synj1	100	88.102	ENSDNOG00000010732	SYNJ1	83	88.186	Dasypus_novemcinctus
ENSMAUG00000009743	Synj1	100	96.392	ENSDORG00000014735	-	100	96.392	Dipodomys_ordii
ENSMAUG00000009743	Synj1	86	94.017	ENSETEG00000018674	SYNJ1	73	94.017	Echinops_telfairi
ENSMAUG00000009743	Synj1	100	97.114	ENSEASG00005006287	SYNJ1	98	92.931	Equus_asinus_asinus
ENSMAUG00000009743	Synj1	100	96.970	ENSECAG00000004829	SYNJ1	100	87.757	Equus_caballus
ENSMAUG00000009743	Synj1	83	97.872	ENSEEUG00000005150	SYNJ1	79	86.867	Erinaceus_europaeus
ENSMAUG00000009743	Synj1	100	81.295	ENSELUG00000009731	synj1	81	71.608	Esox_lucius
ENSMAUG00000009743	Synj1	100	96.392	ENSFCAG00000012498	SYNJ1	100	91.241	Felis_catus
ENSMAUG00000009743	Synj1	74	78.039	ENSFALG00000004680	SYNJ1	78	77.732	Ficedula_albicollis
ENSMAUG00000009743	Synj1	100	96.825	ENSFDAG00000016818	SYNJ1	100	96.825	Fukomys_damarensis
ENSMAUG00000009743	Synj1	100	80.654	ENSFHEG00000017689	synj1	75	68.093	Fundulus_heteroclitus
ENSMAUG00000009743	Synj1	93	79.116	ENSGMOG00000014852	synj1	77	72.326	Gadus_morhua
ENSMAUG00000009743	Synj1	100	92.352	ENSGALG00000034317	SYNJ1	82	79.592	Gallus_gallus
ENSMAUG00000009743	Synj1	100	82.302	ENSGAFG00000019466	synj1	74	67.364	Gambusia_affinis
ENSMAUG00000009743	Synj1	98	76.012	ENSGACG00000020575	synj1	89	65.437	Gasterosteus_aculeatus
ENSMAUG00000009743	Synj1	100	93.218	ENSGAGG00000022523	SYNJ1	100	84.586	Gopherus_agassizii
ENSMAUG00000009743	Synj1	100	96.537	ENSGGOG00000015945	SYNJ1	100	92.143	Gorilla_gorilla
ENSMAUG00000009743	Synj1	100	80.797	ENSHBUG00000007774	synj1	100	66.643	Haplochromis_burtoni
ENSMAUG00000009743	Synj1	100	96.825	ENSHGLG00000006420	SYNJ1	100	96.825	Heterocephalus_glaber_female
ENSMAUG00000009743	Synj1	100	96.825	ENSHGLG00100012591	SYNJ1	100	96.825	Heterocephalus_glaber_male
ENSMAUG00000009743	Synj1	100	76.691	ENSHCOG00000012774	synj1	86	71.725	Hippocampus_comes
ENSMAUG00000009743	Synj1	100	83.022	ENSIPUG00000010691	SYNJ1	83	69.977	Ictalurus_punctatus
ENSMAUG00000009743	Synj1	100	96.825	ENSSTOG00000015806	SYNJ1	100	94.432	Ictidomys_tridecemlineatus
ENSMAUG00000009743	Synj1	99	88.388	ENSJJAG00000020168	Synj1	82	88.388	Jaculus_jaculus
ENSMAUG00000009743	Synj1	100	82.014	ENSKMAG00000004221	synj1	96	71.390	Kryptolebias_marmoratus
ENSMAUG00000009743	Synj1	100	81.241	ENSLBEG00000015081	synj1	82	74.864	Labrus_bergylta
ENSMAUG00000009743	Synj1	100	85.836	ENSLACG00000005928	SYNJ1	82	76.703	Latimeria_chalumnae
ENSMAUG00000009743	Synj1	100	84.211	ENSLOCG00000009230	synj1	88	76.187	Lepisosteus_oculatus
ENSMAUG00000009743	Synj1	100	94.294	ENSLAFG00000011806	SYNJ1	83	91.325	Loxodonta_africana
ENSMAUG00000009743	Synj1	98	92.662	ENSMFAG00000018883	SYNJ1	99	93.312	Macaca_fascicularis
ENSMAUG00000009743	Synj1	100	95.435	ENSMMUG00000004624	SYNJ1	100	93.227	Macaca_mulatta
ENSMAUG00000009743	Synj1	100	96.681	ENSMNEG00000040077	SYNJ1	94	93.440	Macaca_nemestrina
ENSMAUG00000009743	Synj1	100	96.681	ENSMLEG00000037029	SYNJ1	100	92.372	Mandrillus_leucophaeus
ENSMAUG00000009743	Synj1	100	82.734	ENSMAMG00000013404	synj1	78	68.736	Mastacembelus_armatus
ENSMAUG00000009743	Synj1	100	82.158	ENSMZEG00005024358	synj1	100	66.450	Maylandia_zebra
ENSMAUG00000009743	Synj1	100	88.967	ENSMGAG00000014522	SYNJ1	83	83.585	Meleagris_gallopavo
ENSMAUG00000009743	Synj1	100	96.392	ENSMICG00000034953	SYNJ1	100	92.067	Microcebus_murinus
ENSMAUG00000009743	Synj1	100	81.135	ENSMMOG00000010203	synj1	98	69.151	Mola_mola
ENSMAUG00000009743	Synj1	100	85.449	ENSMODG00000021073	SYNJ1	100	79.787	Monodelphis_domestica
ENSMAUG00000009743	Synj1	100	82.590	ENSMALG00000014015	synj1	77	68.195	Monopterus_albus
ENSMAUG00000009743	Synj1	100	97.691	MGP_CAROLIEiJ_G0020951	Synj1	100	97.691	Mus_caroli
ENSMAUG00000009743	Synj1	100	98.124	ENSMUSG00000022973	Synj1	100	98.124	Mus_musculus
ENSMAUG00000009743	Synj1	100	98.124	MGP_PahariEiJ_G0016656	Synj1	100	98.124	Mus_pahari
ENSMAUG00000009743	Synj1	100	98.413	MGP_SPRETEiJ_G0021857	Synj1	100	98.413	Mus_spretus
ENSMAUG00000009743	Synj1	100	95.319	ENSMPUG00000001153	SYNJ1	83	92.372	Mustela_putorius_furo
ENSMAUG00000009743	Synj1	94	94.181	ENSMLUG00000026584	-	100	94.074	Myotis_lucifugus
ENSMAUG00000009743	Synj1	62	82.475	ENSMLUG00000005764	-	76	82.475	Myotis_lucifugus
ENSMAUG00000009743	Synj1	100	96.970	ENSNGAG00000000453	Synj1	100	96.970	Nannospalax_galili
ENSMAUG00000009743	Synj1	100	82.302	ENSNBRG00000011936	synj1	99	63.827	Neolamprologus_brichardi
ENSMAUG00000009743	Synj1	88	89.589	ENSNLEG00000003734	SYNJ1	100	88.157	Nomascus_leucogenys
ENSMAUG00000009743	Synj1	89	79.185	ENSMEUG00000004158	-	73	76.660	Notamacropus_eugenii
ENSMAUG00000009743	Synj1	100	90.014	ENSOPRG00000013602	SYNJ1	75	92.683	Ochotona_princeps
ENSMAUG00000009743	Synj1	100	96.537	ENSODEG00000002409	-	100	96.537	Octodon_degus
ENSMAUG00000009743	Synj1	100	81.223	ENSONIG00000004667	synj1	91	70.651	Oreochromis_niloticus
ENSMAUG00000009743	Synj1	94	91.071	ENSOANG00000006929	SYNJ1	83	84.837	Ornithorhynchus_anatinus
ENSMAUG00000009743	Synj1	100	95.150	ENSOCUG00000001420	SYNJ1	83	89.594	Oryctolagus_cuniculus
ENSMAUG00000009743	Synj1	100	81.295	ENSORLG00000004320	synj1	100	66.135	Oryzias_latipes
ENSMAUG00000009743	Synj1	100	77.809	ENSORLG00020011994	synj1	97	67.808	Oryzias_latipes_hni
ENSMAUG00000009743	Synj1	100	81.439	ENSORLG00015018077	synj1	77	66.081	Oryzias_latipes_hsok
ENSMAUG00000009743	Synj1	100	82.014	ENSOMEG00000014322	synj1	99	67.807	Oryzias_melastigma
ENSMAUG00000009743	Synj1	100	88.316	ENSOGAG00000006010	SYNJ1	81	88.316	Otolemur_garnettii
ENSMAUG00000009743	Synj1	100	95.035	ENSOARG00000013414	SYNJ1	81	91.235	Ovis_aries
ENSMAUG00000009743	Synj1	100	96.537	ENSPPAG00000026784	SYNJ1	100	92.449	Pan_paniscus
ENSMAUG00000009743	Synj1	100	96.537	ENSPPRG00000023469	SYNJ1	100	91.394	Panthera_pardus
ENSMAUG00000009743	Synj1	100	96.392	ENSPTIG00000007930	SYNJ1	100	91.318	Panthera_tigris_altaica
ENSMAUG00000009743	Synj1	100	96.537	ENSPTRG00000023787	SYNJ1	100	92.449	Pan_troglodytes
ENSMAUG00000009743	Synj1	100	96.537	ENSPTRG00000048135	-	100	88.508	Pan_troglodytes
ENSMAUG00000009743	Synj1	100	96.681	ENSPANG00000022531	SYNJ1	100	93.516	Papio_anubis
ENSMAUG00000009743	Synj1	100	83.741	ENSPKIG00000022603	synj1	95	75.917	Paramormyrops_kingsleyae
ENSMAUG00000009743	Synj1	100	82.158	ENSPMGG00000016831	synj1	90	67.048	Periophthalmus_magnuspinnatus
ENSMAUG00000009743	Synj1	100	98.413	ENSPEMG00000018767	Synj1	100	98.413	Peromyscus_maniculatus_bairdii
ENSMAUG00000009743	Synj1	100	63.701	ENSPMAG00000002887	synj1	96	52.892	Petromyzon_marinus
ENSMAUG00000009743	Synj1	100	91.631	ENSPCIG00000016372	SYNJ1	100	85.053	Phascolarctos_cinereus
ENSMAUG00000009743	Synj1	100	80.682	ENSPFOG00000016886	synj1	100	65.299	Poecilia_formosa
ENSMAUG00000009743	Synj1	100	81.583	ENSPLAG00000017559	synj1	100	64.103	Poecilia_latipinna
ENSMAUG00000009743	Synj1	100	81.439	ENSPMEG00000007643	synj1	79	65.405	Poecilia_mexicana
ENSMAUG00000009743	Synj1	100	82.014	ENSPREG00000012412	synj1	100	66.667	Poecilia_reticulata
ENSMAUG00000009743	Synj1	100	95.007	ENSPPYG00000011365	SYNJ1	94	93.059	Pongo_abelii
ENSMAUG00000009743	Synj1	83	90.000	ENSPCAG00000009906	SYNJ1	72	90.000	Procavia_capensis
ENSMAUG00000009743	Synj1	85	98.396	ENSPCOG00000024841	SYNJ1	95	88.943	Propithecus_coquereli
ENSMAUG00000009743	Synj1	100	94.437	ENSPVAG00000000892	SYNJ1	83	87.739	Pteropus_vampyrus
ENSMAUG00000009743	Synj1	100	82.158	ENSPNYG00000022989	synj1	100	66.222	Pundamilia_nyererei
ENSMAUG00000009743	Synj1	100	82.446	ENSPNAG00000021119	synj1	91	76.609	Pygocentrus_nattereri
ENSMAUG00000009743	Synj1	100	97.004	ENSRNOG00000002051	Synj1	100	95.576	Rattus_norvegicus
ENSMAUG00000009743	Synj1	100	96.537	ENSRBIG00000034477	SYNJ1	100	92.220	Rhinopithecus_bieti
ENSMAUG00000009743	Synj1	100	95.150	ENSRROG00000039256	SYNJ1	100	92.372	Rhinopithecus_roxellana
ENSMAUG00000009743	Synj1	100	96.681	ENSSBOG00000021001	SYNJ1	100	92.226	Saimiri_boliviensis_boliviensis
ENSMAUG00000009743	Synj1	100	91.486	ENSSHAG00000008538	SYNJ1	84	82.929	Sarcophilus_harrisii
ENSMAUG00000009743	Synj1	100	82.878	ENSSFOG00015006095	synj1	83	67.836	Scleropages_formosus
ENSMAUG00000009743	Synj1	100	81.871	ENSSMAG00000018066	synj1	95	65.723	Scophthalmus_maximus
ENSMAUG00000009743	Synj1	100	82.302	ENSSDUG00000013058	synj1	77	67.445	Seriola_dumerili
ENSMAUG00000009743	Synj1	100	81.871	ENSSLDG00000021406	synj1	100	68.891	Seriola_lalandi_dorsalis
ENSMAUG00000009743	Synj1	76	93.084	ENSSARG00000009490	SYNJ1	60	94.925	Sorex_araneus
ENSMAUG00000009743	Synj1	100	92.641	ENSSPUG00000012552	SYNJ1	82	79.970	Sphenodon_punctatus
ENSMAUG00000009743	Synj1	89	82.797	ENSSPAG00000006812	SYNJ1	72	67.596	Stegastes_partitus
ENSMAUG00000009743	Synj1	100	82.590	ENSSPAG00000017029	synj1	89	68.491	Stegastes_partitus
ENSMAUG00000009743	Synj1	100	96.681	ENSSSCG00000012035	SYNJ1	100	91.812	Sus_scrofa
ENSMAUG00000009743	Synj1	100	90.652	ENSTGUG00000013445	SYNJ1	83	83.005	Taeniopygia_guttata
ENSMAUG00000009743	Synj1	100	81.583	ENSTRUG00000006907	synj1	96	66.590	Takifugu_rubripes
ENSMAUG00000009743	Synj1	100	76.858	ENSTNIG00000009940	synj1	96	67.739	Tetraodon_nigroviridis
ENSMAUG00000009743	Synj1	92	98.396	ENSTBEG00000016298	SYNJ1	75	86.166	Tupaia_belangeri
ENSMAUG00000009743	Synj1	100	88.873	ENSTTRG00000002222	SYNJ1	83	81.054	Tursiops_truncatus
ENSMAUG00000009743	Synj1	100	96.537	ENSUAMG00000018606	SYNJ1	99	94.595	Ursus_americanus
ENSMAUG00000009743	Synj1	100	96.537	ENSUMAG00000018419	SYNJ1	99	94.595	Ursus_maritimus
ENSMAUG00000009743	Synj1	87	95.749	ENSVPAG00000001241	SYNJ1	70	96.714	Vicugna_pacos
ENSMAUG00000009743	Synj1	100	96.681	ENSVVUG00000023125	SYNJ1	100	92.824	Vulpes_vulpes
ENSMAUG00000009743	Synj1	100	84.561	ENSXETG00000009899	synj1	84	77.903	Xenopus_tropicalis
ENSMAUG00000009743	Synj1	100	80.797	ENSXCOG00000011896	synj1	99	68.906	Xiphophorus_couchianus
ENSMAUG00000009743	Synj1	100	80.512	ENSXMAG00000017524	synj1	100	69.345	Xiphophorus_maculatus