EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	1	7
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	2	7
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	3	7
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	4	7
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	5	7
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	6	7
ENSMAUP00000008350	zf-C2H2	PF00096.26	3.5e-44	7	7
ENSMAUP00000008350	zf-met	PF12874.7	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012169	-	2436	-	ENSMAUP00000008350	551 (aa)	-	UPI000359722D

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000009785	Zkscan3	61	48.052	ENSMAUG00000005776	Repin1	96	48.052
ENSMAUG00000009785	Zkscan3	58	50.299	ENSMAUG00000014247	-	100	50.299
ENSMAUG00000009785	Zkscan3	61	48.523	ENSMAUG00000000939	-	97	48.261
ENSMAUG00000009785	Zkscan3	59	45.000	ENSMAUG00000010647	Zfp882	99	45.000
ENSMAUG00000009785	Zkscan3	50	52.830	ENSMAUG00000018252	Zfp574	64	49.474
ENSMAUG00000009785	Zkscan3	50	49.432	ENSMAUG00000000735	Zfp354a	74	49.573
ENSMAUG00000009785	Zkscan3	59	57.895	ENSMAUG00000016437	-	97	57.895
ENSMAUG00000009785	Zkscan3	61	45.868	ENSMAUG00000009331	-	90	45.726
ENSMAUG00000009785	Zkscan3	56	43.983	ENSMAUG00000015263	-	62	43.983
ENSMAUG00000009785	Zkscan3	61	47.964	ENSMAUG00000005974	-	99	45.887
ENSMAUG00000009785	Zkscan3	59	50.218	ENSMAUG00000017074	Zfp26	99	49.782
ENSMAUG00000009785	Zkscan3	53	51.542	ENSMAUG00000008812	Zfp583	75	50.840
ENSMAUG00000009785	Zkscan3	54	46.694	ENSMAUG00000001536	Zfp39	65	46.694
ENSMAUG00000009785	Zkscan3	58	40.741	ENSMAUG00000015814	Sall4	54	40.984
ENSMAUG00000009785	Zkscan3	61	51.724	ENSMAUG00000015051	Zscan5b	59	51.724
ENSMAUG00000009785	Zkscan3	66	42.708	ENSMAUG00000018740	Mynn	50	42.708
ENSMAUG00000009785	Zkscan3	56	33.108	ENSMAUG00000015448	Zfp423	69	39.535
ENSMAUG00000009785	Zkscan3	58	55.172	ENSMAUG00000007713	Zfp868	97	44.444
ENSMAUG00000009785	Zkscan3	58	38.889	ENSMAUG00000005691	-	88	38.889
ENSMAUG00000009785	Zkscan3	59	48.291	ENSMAUG00000004844	-	98	48.291
ENSMAUG00000009785	Zkscan3	50	48.701	ENSMAUG00000019656	Gzf1	50	38.182
ENSMAUG00000009785	Zkscan3	59	33.113	ENSMAUG00000015438	Zfp64	82	31.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000009785	Zkscan3	100	97.107	ENSCGRG00001006591	Zkscan3	100	97.107	Cricetulus_griseus_chok1gshd
ENSMAUG00000009785	Zkscan3	100	97.107	ENSCGRG00000001582	Zkscan3	100	97.107	Cricetulus_griseus_crigri
ENSMAUG00000009785	Zkscan3	99	79.422	ENSJJAG00000004576	-	99	79.422	Jaculus_jaculus
ENSMAUG00000009785	Zkscan3	100	96.022	ENSMOCG00000017860	Zkscan3	100	96.022	Microtus_ochrogaster
ENSMAUG00000009785	Zkscan3	97	57.143	MGP_CAROLIEiJ_G0018274	Zkscan4	99	59.436	Mus_caroli
ENSMAUG00000009785	Zkscan3	97	66.048	ENSMUSG00000054931	Zkscan4	99	66.048	Mus_musculus
ENSMAUG00000009785	Zkscan3	100	93.852	ENSMUSG00000021327	Zkscan3	100	93.852	Mus_musculus
ENSMAUG00000009785	Zkscan3	96	60.335	MGP_PahariEiJ_G0019324	Zkscan4	99	63.501	Mus_pahari
ENSMAUG00000009785	Zkscan3	97	59.740	MGP_SPRETEiJ_G0019129	Zkscan4	99	59.555	Mus_spretus
ENSMAUG00000009785	Zkscan3	96	66.974	ENSPCAG00000000195	ZKSCAN4	99	66.974	Procavia_capensis
ENSMAUG00000009785	Zkscan3	97	69.853	ENSSSCG00000001204	ZKSCAN4	99	69.853	Sus_scrofa
ENSMAUG00000009785	Zkscan3	71	64.394	ENSTTRG00000015632	-	99	64.394	Tursiops_truncatus