EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000009843 (Gene tree)
Gene ID: 101824786
Gene Symbol: Pcbp1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 1071 bases
Position: chrKB708153.1:3165054-3166124
Accession: 101824786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000008419	KH_1	PF00013.29	1.3e-51	1	3
ENSMAUP00000008419	KH_1	PF00013.29	1.3e-51	2	3
ENSMAUP00000008419	KH_1	PF00013.29	1.3e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012241	-	1071	XM_005071106	ENSMAUP00000008419	356 (aa)	XP_005071163	A0A1U7QFH5

Gene Model

Click here to download ENSMAUG00000009843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000009843's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000009843	Pcbp1	98	52.691	ENSMAUG00000021064	Pcbp4	77	52.691
ENSMAUG00000009843	Pcbp1	99	66.575	ENSMAUG00000007036	Pcbp3	91	66.575
ENSMAUG00000009843	Pcbp1	99	60.623	ENSMAUG00000007839	Pcbp2	98	60.623
ENSMAUG00000009843	Pcbp1	60	31.548	ENSMAUG00000012513	Fubp3	72	31.737
ENSMAUG00000009843	Pcbp1	85	42.857	ENSMAUG00000015268	-	62	43.529
ENSMAUG00000009843	Pcbp1	69	34.667	ENSMAUG00000018966	Khsrp	59	34.667
ENSMAUG00000009843	Pcbp1	97	74.576	ENSMAUG00000018893	-	97	74.576
ENSMAUG00000009843	Pcbp1	76	43.243	ENSMAUG00000008302	Igf2bp2	63	34.074
ENSMAUG00000009843	Pcbp1	66	41.558	ENSMAUG00000014038	Nova2	50	41.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000009843	Pcbp1	100	99.719	ENSG00000169564	PCBP1	100	99.719	Homo_sapiens
ENSMAUG00000009843	Pcbp1	100	96.910	ENSAMEG00000016094	PCBP1	100	96.910	Ailuropoda_melanoleuca
ENSMAUG00000009843	Pcbp1	100	85.393	ENSANAG00000033377	-	100	85.393	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	100	88.764	ENSANAG00000023938	-	100	88.764	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	79	94.700	ENSANAG00000031745	-	100	94.700	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	100	87.921	ENSANAG00000026077	-	100	87.921	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	89	87.342	ENSANAG00000027108	-	100	87.342	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	97	95.954	ENSANAG00000026989	-	99	95.954	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	79	94.700	ENSANAG00000019364	-	100	94.700	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	79	91.519	ENSANAG00000022494	-	100	91.519	Aotus_nancymaae
ENSMAUG00000009843	Pcbp1	91	99.691	ENSBTAG00000008985	PCBP1	99	99.691	Bos_taurus
ENSMAUG00000009843	Pcbp1	100	94.101	ENSCJAG00000038388	-	95	94.101	Callithrix_jacchus
ENSMAUG00000009843	Pcbp1	100	99.438	ENSCAFG00000003326	PCBP1	100	99.438	Canis_familiaris
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCHIG00000007923	PCBP1	100	99.719	Capra_hircus
ENSMAUG00000009843	Pcbp1	100	99.157	ENSTSYG00000027848	PCBP1	100	99.157	Carlito_syrichta
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCPOG00000013511	PCBP1	100	99.719	Cavia_porcellus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCCAG00000019842	-	100	99.719	Cebus_capucinus
ENSMAUG00000009843	Pcbp1	100	91.292	ENSCCAG00000029186	-	98	91.292	Cebus_capucinus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCATG00000015029	PCBP1	100	99.719	Cercocebus_atys
ENSMAUG00000009843	Pcbp1	100	99.157	ENSCLAG00000017909	PCBP1	100	99.157	Chinchilla_lanigera
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCSAG00000019441	PCBP1	100	99.719	Chlorocebus_sabaeus
ENSMAUG00000009843	Pcbp1	72	84.314	ENSCANG00000033810	-	87	84.314	Colobus_angolensis_palliatus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCANG00000018039	-	100	99.719	Colobus_angolensis_palliatus
ENSMAUG00000009843	Pcbp1	100	89.607	ENSCANG00000032470	-	94	89.607	Colobus_angolensis_palliatus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCGRG00001015078	Pcbp1	100	99.719	Cricetulus_griseus_chok1gshd
ENSMAUG00000009843	Pcbp1	100	99.719	ENSCGRG00000018899	Pcbp1	100	99.719	Cricetulus_griseus_crigri
ENSMAUG00000009843	Pcbp1	80	98.947	ENSDNOG00000036372	PCBP1	99	98.947	Dasypus_novemcinctus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSDORG00000008216	Pcbp1	100	99.719	Dipodomys_ordii
ENSMAUG00000009843	Pcbp1	100	99.719	ENSFCAG00000022238	PCBP1	100	99.719	Felis_catus
ENSMAUG00000009843	Pcbp1	100	99.438	ENSFDAG00000019637	PCBP1	100	99.438	Fukomys_damarensis
ENSMAUG00000009843	Pcbp1	100	99.719	ENSGGOG00000028130	PCBP1	100	99.719	Gorilla_gorilla
ENSMAUG00000009843	Pcbp1	100	99.438	ENSHGLG00000020345	Pcbp1	100	99.438	Heterocephalus_glaber_female
ENSMAUG00000009843	Pcbp1	100	97.472	ENSHGLG00000020243	-	100	97.472	Heterocephalus_glaber_female
ENSMAUG00000009843	Pcbp1	100	99.157	ENSHGLG00100019620	-	100	99.157	Heterocephalus_glaber_male
ENSMAUG00000009843	Pcbp1	100	99.438	ENSHGLG00100019761	Pcbp1	100	99.438	Heterocephalus_glaber_male
ENSMAUG00000009843	Pcbp1	100	99.719	ENSSTOG00000026002	PCBP1	100	99.719	Ictidomys_tridecemlineatus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSJJAG00000000737	Pcbp1	100	99.719	Jaculus_jaculus
ENSMAUG00000009843	Pcbp1	95	88.131	ENSMFAG00000003400	PCBP1	100	88.131	Macaca_fascicularis
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMMUG00000038295	PCBP1	100	99.719	Macaca_mulatta
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMNEG00000002934	PCBP1	100	99.719	Macaca_nemestrina
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMLEG00000027389	PCBP1	100	99.719	Mandrillus_leucophaeus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMICG00000038221	PCBP1	100	99.719	Microcebus_murinus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMOCG00000008102	Pcbp1	100	99.719	Microtus_ochrogaster
ENSMAUG00000009843	Pcbp1	100	99.719	MGP_CAROLIEiJ_G0028598	Pcbp1	100	99.719	Mus_caroli
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMUSG00000051695	Pcbp1	100	99.719	Mus_musculus
ENSMAUG00000009843	Pcbp1	100	99.719	MGP_PahariEiJ_G0022335	Pcbp1	100	99.719	Mus_pahari
ENSMAUG00000009843	Pcbp1	100	99.719	MGP_SPRETEiJ_G0029609	Pcbp1	100	99.719	Mus_spretus
ENSMAUG00000009843	Pcbp1	100	96.910	ENSMPUG00000007175	PCBP1	100	96.910	Mustela_putorius_furo
ENSMAUG00000009843	Pcbp1	100	99.719	ENSMLUG00000014173	PCBP1	100	99.719	Myotis_lucifugus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSNGAG00000011957	-	100	99.719	Nannospalax_galili
ENSMAUG00000009843	Pcbp1	100	99.719	ENSNGAG00000014909	-	100	99.719	Nannospalax_galili
ENSMAUG00000009843	Pcbp1	100	99.719	ENSNLEG00000018722	PCBP1	100	99.719	Nomascus_leucogenys
ENSMAUG00000009843	Pcbp1	100	83.427	ENSODEG00000000263	PCBP1	100	83.427	Octodon_degus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSOCUG00000003634	PCBP1	100	99.719	Oryctolagus_cuniculus
ENSMAUG00000009843	Pcbp1	100	96.910	ENSOGAG00000028946	PCBP1	100	96.910	Otolemur_garnettii
ENSMAUG00000009843	Pcbp1	100	99.719	ENSOARG00000019516	PCBP1	100	99.719	Ovis_aries
ENSMAUG00000009843	Pcbp1	100	97.753	ENSPPAG00000036116	PCBP1	99	98.319	Pan_paniscus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSPPRG00000020533	PCBP1	100	99.719	Panthera_pardus
ENSMAUG00000009843	Pcbp1	100	99.719	ENSPTIG00000007318	PCBP1	100	99.719	Panthera_tigris_altaica
ENSMAUG00000009843	Pcbp1	100	99.719	ENSPTRG00000012025	PCBP1	100	99.719	Pan_troglodytes
ENSMAUG00000009843	Pcbp1	100	99.719	ENSPANG00000011314	PCBP1	100	99.719	Papio_anubis
ENSMAUG00000009843	Pcbp1	100	99.719	ENSPPYG00000012328	PCBP1	100	99.719	Pongo_abelii
ENSMAUG00000009843	Pcbp1	100	99.719	ENSPCOG00000026934	PCBP1	100	99.719	Propithecus_coquereli
ENSMAUG00000009843	Pcbp1	93	98.494	ENSRROG00000012514	-	100	98.494	Rhinopithecus_roxellana
ENSMAUG00000009843	Pcbp1	100	98.876	ENSRROG00000009684	-	95	98.876	Rhinopithecus_roxellana
ENSMAUG00000009843	Pcbp1	100	83.146	ENSSBOG00000035309	-	94	83.146	Saimiri_boliviensis_boliviensis
ENSMAUG00000009843	Pcbp1	100	99.438	ENSSSCG00000027224	PCBP1	100	99.438	Sus_scrofa
ENSMAUG00000009843	Pcbp1	51	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSMAUG00000009843	Pcbp1	91	99.381	ENSVVUG00000028033	PCBP1	99	99.381	Vulpes_vulpes