EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000010280 (Gene tree)
Gene ID: 101840869
Gene Symbol: Rpusd4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 9670 bases
Position: chrKB708331.1:931020-940689
Accession: 101840869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000008994	PseudoU_synth_2	PF00849.22	4.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012836	-	1756	XM_005085840	ENSMAUP00000008994	377 (aa)	XP_005085897	A0A1U7R231

Gene Model

Click here to download ENSMAUG00000010280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000010280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000010280	Rpusd4	81	31.077	ENSMAUG00000015473	Rpusd3	88	30.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000010280	Rpusd4	100	80.371	ENSG00000165526	RPUSD4	100	80.371	Homo_sapiens
ENSMAUG00000010280	Rpusd4	90	50.000	ENSAPOG00000011024	rpusd4	85	50.000	Acanthochromis_polyacanthus
ENSMAUG00000010280	Rpusd4	100	79.576	ENSAMEG00000000127	-	100	79.576	Ailuropoda_melanoleuca
ENSMAUG00000010280	Rpusd4	80	84.677	ENSAMEG00000005953	-	100	84.677	Ailuropoda_melanoleuca
ENSMAUG00000010280	Rpusd4	85	49.693	ENSACIG00000003533	rpusd4	95	49.693	Amphilophus_citrinellus
ENSMAUG00000010280	Rpusd4	88	50.298	ENSAOCG00000015409	rpusd4	83	50.298	Amphiprion_ocellaris
ENSMAUG00000010280	Rpusd4	88	50.595	ENSAPEG00000018935	rpusd4	83	50.595	Amphiprion_percula
ENSMAUG00000010280	Rpusd4	91	49.856	ENSATEG00000008059	rpusd4	84	49.856	Anabas_testudineus
ENSMAUG00000010280	Rpusd4	73	59.857	ENSAPLG00000013250	RPUSD4	99	59.122	Anas_platyrhynchos
ENSMAUG00000010280	Rpusd4	97	60.326	ENSACAG00000000189	RPUSD4	100	60.326	Anolis_carolinensis
ENSMAUG00000010280	Rpusd4	99	81.452	ENSANAG00000024050	RPUSD4	100	81.452	Aotus_nancymaae
ENSMAUG00000010280	Rpusd4	90	50.867	ENSACLG00000020996	rpusd4	87	50.867	Astatotilapia_calliptera
ENSMAUG00000010280	Rpusd4	88	50.148	ENSAMXG00000031479	rpusd4	95	50.148	Astyanax_mexicanus
ENSMAUG00000010280	Rpusd4	100	75.397	ENSBTAG00000020900	RPUSD4	100	75.397	Bos_taurus
ENSMAUG00000010280	Rpusd4	98	81.351	ENSCJAG00000042850	RPUSD4	93	81.351	Callithrix_jacchus
ENSMAUG00000010280	Rpusd4	100	79.630	ENSCAFG00000010488	RPUSD4	100	79.630	Canis_familiaris
ENSMAUG00000010280	Rpusd4	100	79.630	ENSCAFG00020010621	RPUSD4	100	79.630	Canis_lupus_dingo
ENSMAUG00000010280	Rpusd4	100	75.989	ENSCHIG00000009975	RPUSD4	100	75.989	Capra_hircus
ENSMAUG00000010280	Rpusd4	100	83.024	ENSTSYG00000008456	RPUSD4	100	83.024	Carlito_syrichta
ENSMAUG00000010280	Rpusd4	68	78.682	ENSCAPG00000006040	RPUSD4	100	78.682	Cavia_aperea
ENSMAUG00000010280	Rpusd4	100	79.045	ENSCPOG00000014971	RPUSD4	100	79.045	Cavia_porcellus
ENSMAUG00000010280	Rpusd4	99	81.720	ENSCCAG00000027838	RPUSD4	100	81.720	Cebus_capucinus
ENSMAUG00000010280	Rpusd4	100	81.432	ENSCATG00000041570	RPUSD4	100	81.432	Cercocebus_atys
ENSMAUG00000010280	Rpusd4	100	81.963	ENSCLAG00000016553	RPUSD4	100	81.963	Chinchilla_lanigera
ENSMAUG00000010280	Rpusd4	100	81.432	ENSCSAG00000002274	RPUSD4	100	81.432	Chlorocebus_sabaeus
ENSMAUG00000010280	Rpusd4	75	82.686	ENSCHOG00000010249	RPUSD4	100	82.686	Choloepus_hoffmanni
ENSMAUG00000010280	Rpusd4	75	69.123	ENSCPBG00000011175	RPUSD4	98	69.123	Chrysemys_picta_bellii
ENSMAUG00000010280	Rpusd4	76	41.497	ENSCSAVG00000000872	-	57	41.497	Ciona_savignyi
ENSMAUG00000010280	Rpusd4	100	80.902	ENSCANG00000039684	RPUSD4	100	80.902	Colobus_angolensis_palliatus
ENSMAUG00000010280	Rpusd4	100	93.634	ENSCGRG00001024141	Rpusd4	100	93.634	Cricetulus_griseus_chok1gshd
ENSMAUG00000010280	Rpusd4	100	93.634	ENSCGRG00000014415	Rpusd4	100	93.634	Cricetulus_griseus_crigri
ENSMAUG00000010280	Rpusd4	88	50.592	ENSCVAG00000008761	rpusd4	93	48.901	Cyprinodon_variegatus
ENSMAUG00000010280	Rpusd4	88	50.888	ENSCVAG00000000392	rpusd4	94	51.506	Cyprinodon_variegatus
ENSMAUG00000010280	Rpusd4	91	48.555	ENSDARG00000012674	rpusd4	96	48.555	Danio_rerio
ENSMAUG00000010280	Rpusd4	100	76.658	ENSDNOG00000020026	RPUSD4	100	76.658	Dasypus_novemcinctus
ENSMAUG00000010280	Rpusd4	100	77.454	ENSDORG00000016717	Rpusd4	100	77.454	Dipodomys_ordii
ENSMAUG00000010280	Rpusd4	99	76.533	ENSETEG00000013953	RPUSD4	99	76.533	Echinops_telfairi
ENSMAUG00000010280	Rpusd4	100	80.371	ENSEASG00005022982	RPUSD4	100	80.371	Equus_asinus_asinus
ENSMAUG00000010280	Rpusd4	100	79.576	ENSECAG00000000557	RPUSD4	100	79.576	Equus_caballus
ENSMAUG00000010280	Rpusd4	80	79.891	ENSEEUG00000014036	RPUSD4	80	79.891	Erinaceus_europaeus
ENSMAUG00000010280	Rpusd4	89	53.314	ENSELUG00000008075	rpusd4	91	53.314	Esox_lucius
ENSMAUG00000010280	Rpusd4	100	80.902	ENSFCAG00000029789	RPUSD4	100	80.902	Felis_catus
ENSMAUG00000010280	Rpusd4	89	57.227	ENSFALG00000005171	RPUSD4	99	57.227	Ficedula_albicollis
ENSMAUG00000010280	Rpusd4	100	79.947	ENSFDAG00000014307	RPUSD4	100	79.947	Fukomys_damarensis
ENSMAUG00000010280	Rpusd4	89	51.170	ENSFHEG00000004329	rpusd4	87	51.170	Fundulus_heteroclitus
ENSMAUG00000010280	Rpusd4	85	51.077	ENSGMOG00000017726	rpusd4	96	51.077	Gadus_morhua
ENSMAUG00000010280	Rpusd4	91	54.416	ENSGALG00000024326	RPUSD4	99	55.618	Gallus_gallus
ENSMAUG00000010280	Rpusd4	93	46.944	ENSGAFG00000021559	rpusd4	91	46.944	Gambusia_affinis
ENSMAUG00000010280	Rpusd4	89	49.412	ENSGACG00000001657	rpusd4	97	50.714	Gasterosteus_aculeatus
ENSMAUG00000010280	Rpusd4	95	61.560	ENSGAGG00000000132	RPUSD4	98	61.560	Gopherus_agassizii
ENSMAUG00000010280	Rpusd4	100	80.637	ENSGGOG00000016494	RPUSD4	100	80.637	Gorilla_gorilla
ENSMAUG00000010280	Rpusd4	90	50.867	ENSHBUG00000022838	rpusd4	87	50.867	Haplochromis_burtoni
ENSMAUG00000010280	Rpusd4	100	81.167	ENSHGLG00000002285	RPUSD4	100	81.167	Heterocephalus_glaber_female
ENSMAUG00000010280	Rpusd4	100	81.167	ENSHGLG00100006385	RPUSD4	100	81.167	Heterocephalus_glaber_male
ENSMAUG00000010280	Rpusd4	86	51.672	ENSHCOG00000006612	rpusd4	83	51.672	Hippocampus_comes
ENSMAUG00000010280	Rpusd4	90	52.035	ENSIPUG00000023879	rusd4	89	52.035	Ictalurus_punctatus
ENSMAUG00000010280	Rpusd4	97	81.868	ENSSTOG00000025280	RPUSD4	100	81.868	Ictidomys_tridecemlineatus
ENSMAUG00000010280	Rpusd4	99	84.409	ENSJJAG00000018673	Rpusd4	100	84.409	Jaculus_jaculus
ENSMAUG00000010280	Rpusd4	85	53.374	ENSKMAG00000021805	rpusd4	84	53.374	Kryptolebias_marmoratus
ENSMAUG00000010280	Rpusd4	86	52.134	ENSLBEG00000020394	rpusd4	91	52.134	Labrus_bergylta
ENSMAUG00000010280	Rpusd4	85	61.231	ENSLACG00000011028	RPUSD4	82	61.231	Latimeria_chalumnae
ENSMAUG00000010280	Rpusd4	86	48.930	ENSLOCG00000003124	rpusd4	87	48.930	Lepisosteus_oculatus
ENSMAUG00000010280	Rpusd4	100	79.310	ENSLAFG00000005211	RPUSD4	100	79.310	Loxodonta_africana
ENSMAUG00000010280	Rpusd4	100	81.432	ENSMFAG00000039513	RPUSD4	100	81.432	Macaca_fascicularis
ENSMAUG00000010280	Rpusd4	100	81.167	ENSMMUG00000007933	RPUSD4	100	81.167	Macaca_mulatta
ENSMAUG00000010280	Rpusd4	100	81.167	ENSMNEG00000027414	RPUSD4	100	81.167	Macaca_nemestrina
ENSMAUG00000010280	Rpusd4	100	81.167	ENSMLEG00000042461	RPUSD4	100	81.167	Mandrillus_leucophaeus
ENSMAUG00000010280	Rpusd4	91	48.857	ENSMAMG00000023839	rpusd4	89	48.857	Mastacembelus_armatus
ENSMAUG00000010280	Rpusd4	90	50.867	ENSMZEG00005011999	rpusd4	87	50.867	Maylandia_zebra
ENSMAUG00000010280	Rpusd4	74	59.786	ENSMGAG00000000840	RPUSD4	99	57.231	Meleagris_gallopavo
ENSMAUG00000010280	Rpusd4	100	81.432	ENSMICG00000015979	RPUSD4	100	81.432	Microcebus_murinus
ENSMAUG00000010280	Rpusd4	100	88.064	ENSMOCG00000000661	Rpusd4	100	88.064	Microtus_ochrogaster
ENSMAUG00000010280	Rpusd4	78	54.181	ENSMMOG00000021731	rpusd4	88	54.181	Mola_mola
ENSMAUG00000010280	Rpusd4	86	74.847	ENSMODG00000004521	RPUSD4	84	74.847	Monodelphis_domestica
ENSMAUG00000010280	Rpusd4	80	52.922	ENSMALG00000005839	rpusd4	98	51.543	Monopterus_albus
ENSMAUG00000010280	Rpusd4	100	87.533	MGP_CAROLIEiJ_G0031954	Rpusd4	100	87.533	Mus_caroli
ENSMAUG00000010280	Rpusd4	100	87.003	ENSMUSG00000032044	Rpusd4	100	87.003	Mus_musculus
ENSMAUG00000010280	Rpusd4	100	87.798	MGP_PahariEiJ_G0014819	Rpusd4	100	87.798	Mus_pahari
ENSMAUG00000010280	Rpusd4	100	87.003	MGP_SPRETEiJ_G0033078	Rpusd4	100	87.003	Mus_spretus
ENSMAUG00000010280	Rpusd4	98	79.245	ENSMPUG00000006608	RPUSD4	99	79.245	Mustela_putorius_furo
ENSMAUG00000010280	Rpusd4	89	83.383	ENSMLUG00000017328	-	96	80.000	Myotis_lucifugus
ENSMAUG00000010280	Rpusd4	67	82.677	ENSMLUG00000029348	-	100	82.677	Myotis_lucifugus
ENSMAUG00000010280	Rpusd4	99	82.979	ENSNGAG00000020847	Rpusd4	99	82.979	Nannospalax_galili
ENSMAUG00000010280	Rpusd4	86	52.439	ENSNBRG00000005207	rpusd4	94	52.439	Neolamprologus_brichardi
ENSMAUG00000010280	Rpusd4	100	81.963	ENSNLEG00000007465	RPUSD4	100	81.963	Nomascus_leucogenys
ENSMAUG00000010280	Rpusd4	91	72.384	ENSMEUG00000004370	RPUSD4	93	72.384	Notamacropus_eugenii
ENSMAUG00000010280	Rpusd4	70	59.245	ENSOPRG00000013141	-	100	59.245	Ochotona_princeps
ENSMAUG00000010280	Rpusd4	100	79.576	ENSODEG00000004577	RPUSD4	100	79.576	Octodon_degus
ENSMAUG00000010280	Rpusd4	92	50.852	ENSONIG00000018879	rpusd4	94	50.852	Oreochromis_niloticus
ENSMAUG00000010280	Rpusd4	77	68.814	ENSOANG00000007247	RPUSD4	100	66.454	Ornithorhynchus_anatinus
ENSMAUG00000010280	Rpusd4	100	80.159	ENSOCUG00000017039	RPUSD4	100	80.159	Oryctolagus_cuniculus
ENSMAUG00000010280	Rpusd4	93	49.577	ENSORLG00000002750	rpusd4	97	49.577	Oryzias_latipes
ENSMAUG00000010280	Rpusd4	87	50.000	ENSORLG00020002044	rpusd4	83	50.000	Oryzias_latipes_hni
ENSMAUG00000010280	Rpusd4	87	50.599	ENSORLG00015020034	rpusd4	83	50.599	Oryzias_latipes_hsok
ENSMAUG00000010280	Rpusd4	89	51.163	ENSOMEG00000004861	rpusd4	84	51.163	Oryzias_melastigma
ENSMAUG00000010280	Rpusd4	100	79.365	ENSOGAG00000008922	RPUSD4	100	79.365	Otolemur_garnettii
ENSMAUG00000010280	Rpusd4	98	76.757	ENSOARG00000012238	RPUSD4	98	76.819	Ovis_aries
ENSMAUG00000010280	Rpusd4	100	80.637	ENSPPAG00000042883	RPUSD4	93	80.637	Pan_paniscus
ENSMAUG00000010280	Rpusd4	100	80.637	ENSPPRG00000003081	RPUSD4	100	80.637	Panthera_pardus
ENSMAUG00000010280	Rpusd4	100	80.637	ENSPTIG00000012059	RPUSD4	100	80.637	Panthera_tigris_altaica
ENSMAUG00000010280	Rpusd4	100	80.371	ENSPTRG00000004454	RPUSD4	100	80.371	Pan_troglodytes
ENSMAUG00000010280	Rpusd4	100	81.698	ENSPANG00000015040	RPUSD4	100	81.698	Papio_anubis
ENSMAUG00000010280	Rpusd4	89	57.396	ENSPKIG00000023986	rpusd4	86	57.396	Paramormyrops_kingsleyae
ENSMAUG00000010280	Rpusd4	79	68.000	ENSPSIG00000014268	RPUSD4	95	68.000	Pelodiscus_sinensis
ENSMAUG00000010280	Rpusd4	86	49.848	ENSPMGG00000002806	rpusd4	91	49.695	Periophthalmus_magnuspinnatus
ENSMAUG00000010280	Rpusd4	100	81.698	ENSPEMG00000000278	Rpusd4	100	81.698	Peromyscus_maniculatus_bairdii
ENSMAUG00000010280	Rpusd4	80	45.373	ENSPMAG00000008183	rpusd4	97	45.373	Petromyzon_marinus
ENSMAUG00000010280	Rpusd4	93	72.521	ENSPCIG00000010212	RPUSD4	97	72.521	Phascolarctos_cinereus
ENSMAUG00000010280	Rpusd4	89	49.855	ENSPFOG00000019030	rpusd4	90	49.855	Poecilia_formosa
ENSMAUG00000010280	Rpusd4	89	50.437	ENSPLAG00000016848	rpusd4	87	50.437	Poecilia_latipinna
ENSMAUG00000010280	Rpusd4	89	49.563	ENSPMEG00000017534	rpusd4	87	49.563	Poecilia_mexicana
ENSMAUG00000010280	Rpusd4	87	49.852	ENSPREG00000005689	rpusd4	87	49.852	Poecilia_reticulata
ENSMAUG00000010280	Rpusd4	100	80.637	ENSPPYG00000004043	RPUSD4	100	80.637	Pongo_abelii
ENSMAUG00000010280	Rpusd4	80	76.757	ENSPCAG00000000753	RPUSD4	82	76.757	Procavia_capensis
ENSMAUG00000010280	Rpusd4	98	75.202	ENSPCOG00000020694	RPUSD4	100	75.202	Propithecus_coquereli
ENSMAUG00000010280	Rpusd4	100	80.106	ENSPVAG00000000988	RPUSD4	100	80.106	Pteropus_vampyrus
ENSMAUG00000010280	Rpusd4	90	49.422	ENSPNYG00000009652	rpusd4	87	49.422	Pundamilia_nyererei
ENSMAUG00000010280	Rpusd4	88	51.198	ENSPNAG00000012264	rpusd4	88	51.198	Pygocentrus_nattereri
ENSMAUG00000010280	Rpusd4	100	87.533	ENSRNOG00000011567	Rpusd4	100	87.533	Rattus_norvegicus
ENSMAUG00000010280	Rpusd4	96	83.380	ENSRBIG00000034842	RPUSD4	100	81.698	Rhinopithecus_bieti
ENSMAUG00000010280	Rpusd4	96	83.380	ENSRROG00000039753	RPUSD4	100	81.698	Rhinopithecus_roxellana
ENSMAUG00000010280	Rpusd4	99	80.376	ENSSBOG00000030413	RPUSD4	100	80.376	Saimiri_boliviensis_boliviensis
ENSMAUG00000010280	Rpusd4	80	76.080	ENSSHAG00000008304	RPUSD4	99	76.080	Sarcophilus_harrisii
ENSMAUG00000010280	Rpusd4	90	54.335	ENSSFOG00015006203	rpusd4	93	54.335	Scleropages_formosus
ENSMAUG00000010280	Rpusd4	95	48.387	ENSSMAG00000020978	rpusd4	97	48.387	Scophthalmus_maximus
ENSMAUG00000010280	Rpusd4	88	49.853	ENSSDUG00000013399	rpusd4	89	49.853	Seriola_dumerili
ENSMAUG00000010280	Rpusd4	88	49.555	ENSSLDG00000023507	rpusd4	89	49.555	Seriola_lalandi_dorsalis
ENSMAUG00000010280	Rpusd4	90	61.988	ENSSPUG00000001401	RPUSD4	94	62.573	Sphenodon_punctatus
ENSMAUG00000010280	Rpusd4	87	52.410	ENSSPAG00000012163	rpusd4	85	52.410	Stegastes_partitus
ENSMAUG00000010280	Rpusd4	99	78.552	ENSSSCG00000015233	RPUSD4	99	78.552	Sus_scrofa
ENSMAUG00000010280	Rpusd4	79	60.000	ENSTGUG00000000773	RPUSD4	100	60.000	Taeniopygia_guttata
ENSMAUG00000010280	Rpusd4	86	50.303	ENSTRUG00000012283	rpusd4	84	50.303	Takifugu_rubripes
ENSMAUG00000010280	Rpusd4	93	48.179	ENSTNIG00000014676	rpusd4	90	48.179	Tetraodon_nigroviridis
ENSMAUG00000010280	Rpusd4	100	78.515	ENSTTRG00000001555	RPUSD4	100	78.515	Tursiops_truncatus
ENSMAUG00000010280	Rpusd4	100	79.045	ENSUMAG00000002219	RPUSD4	100	79.045	Ursus_maritimus
ENSMAUG00000010280	Rpusd4	70	80.000	ENSVPAG00000001066	RPUSD4	100	80.000	Vicugna_pacos
ENSMAUG00000010280	Rpusd4	100	79.420	ENSVVUG00000020101	RPUSD4	100	79.420	Vulpes_vulpes
ENSMAUG00000010280	Rpusd4	89	49.854	ENSXCOG00000004676	rpusd4	90	49.854	Xiphophorus_couchianus
ENSMAUG00000010280	Rpusd4	86	51.205	ENSXMAG00000023351	rpusd4	84	51.205	Xiphophorus_maculatus