EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000010289 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 349 bases
Position: chrKB708132.1:1864131-1864479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000009002	LSM	PF01423.22	8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012845	-	231	-	ENSMAUP00000009002	76 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000010289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000010289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000010289	-	76	93.443	ENSMAUG00000019737	-	82	93.443
ENSMAUG00000010289	-	76	93.443	ENSMAUG00000016909	-	82	93.443
ENSMAUG00000010289	-	62	51.064	ENSMAUG00000014938	Lsm6	59	51.064
ENSMAUG00000010289	-	86	69.444	ENSMAUG00000008799	-	97	69.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000010289	-	96	74.699	ENSG00000139343	SNRPF	97	74.699	Homo_sapiens
ENSMAUG00000010289	-	86	72.222	ENSAPOG00000003377	snrpf	65	72.289	Acanthochromis_polyacanthus
ENSMAUG00000010289	-	67	88.235	ENSAMEG00000018718	-	71	86.885	Ailuropoda_melanoleuca
ENSMAUG00000010289	-	76	93.443	ENSAMEG00000002166	-	72	93.443	Ailuropoda_melanoleuca
ENSMAUG00000010289	-	66	94.000	ENSACIG00000013216	snrpf	72	90.164	Amphilophus_citrinellus
ENSMAUG00000010289	-	66	94.000	ENSAOCG00000015108	snrpf	72	90.164	Amphiprion_ocellaris
ENSMAUG00000010289	-	66	94.000	ENSAPEG00000022022	snrpf	72	90.164	Amphiprion_percula
ENSMAUG00000010289	-	88	71.622	ENSATEG00000022625	snrpf	91	71.765	Anabas_testudineus
ENSMAUG00000010289	-	96	73.494	ENSACAG00000014073	SNRPF	95	73.494	Anolis_carolinensis
ENSMAUG00000010289	-	86	50.000	ENSANAG00000025860	-	96	51.807	Aotus_nancymaae
ENSMAUG00000010289	-	88	70.667	ENSANAG00000020297	-	79	70.930	Aotus_nancymaae
ENSMAUG00000010289	-	96	74.699	ENSANAG00000032845	SNRPF	97	74.699	Aotus_nancymaae
ENSMAUG00000010289	-	66	94.000	ENSACLG00000016066	snrpf	72	90.164	Astatotilapia_calliptera
ENSMAUG00000010289	-	66	90.000	ENSAMXG00000007421	snrpf	71	86.885	Astyanax_mexicanus
ENSMAUG00000010289	-	96	74.699	ENSBTAG00000016271	SNRPF	97	74.699	Bos_taurus
ENSMAUG00000010289	-	70	90.566	ENSBTAG00000050012	-	65	90.566	Bos_taurus
ENSMAUG00000010289	-	72	70.909	WBGene00004918	snr-5	65	70.909	Caenorhabditis_elegans
ENSMAUG00000010289	-	96	74.699	ENSCJAG00000002705	-	97	74.699	Callithrix_jacchus
ENSMAUG00000010289	-	76	93.443	ENSCAFG00000006395	-	55	93.443	Canis_familiaris
ENSMAUG00000010289	-	63	93.750	ENSCAFG00000031151	-	71	88.525	Canis_familiaris
ENSMAUG00000010289	-	74	87.500	ENSCAFG00020013161	-	60	87.500	Canis_lupus_dingo
ENSMAUG00000010289	-	63	93.750	ENSCAFG00020010823	-	71	88.525	Canis_lupus_dingo
ENSMAUG00000010289	-	66	84.000	ENSTSYG00000030635	-	70	81.967	Carlito_syrichta
ENSMAUG00000010289	-	86	68.493	ENSTSYG00000036502	-	96	69.048	Carlito_syrichta
ENSMAUG00000010289	-	92	70.130	ENSTSYG00000031636	-	65	70.130	Carlito_syrichta
ENSMAUG00000010289	-	76	93.443	ENSCAPG00000007242	SNRPF	72	93.443	Cavia_aperea
ENSMAUG00000010289	-	96	74.699	ENSCPOG00000013898	SNRPF	97	74.699	Cavia_porcellus
ENSMAUG00000010289	-	96	74.699	ENSCCAG00000017356	-	97	74.699	Cebus_capucinus
ENSMAUG00000010289	-	96	74.699	ENSCCAG00000037378	-	97	74.699	Cebus_capucinus
ENSMAUG00000010289	-	99	68.235	ENSCCAG00000033627	-	67	68.235	Cebus_capucinus
ENSMAUG00000010289	-	96	74.699	ENSCLAG00000007200	SNRPF	97	74.699	Chinchilla_lanigera
ENSMAUG00000010289	-	76	93.443	ENSCSAG00000003602	-	50	93.443	Chlorocebus_sabaeus
ENSMAUG00000010289	-	51	97.436	ENSCHOG00000009392	SNRPF	61	97.436	Choloepus_hoffmanni
ENSMAUG00000010289	-	76	85.246	ENSCPBG00000026463	-	71	85.246	Chrysemys_picta_bellii
ENSMAUG00000010289	-	64	91.837	ENSCPBG00000006227	-	70	86.667	Chrysemys_picta_bellii
ENSMAUG00000010289	-	96	71.605	ENSCPBG00000001985	-	96	71.605	Chrysemys_picta_bellii
ENSMAUG00000010289	-	96	74.074	ENSCPBG00000024287	-	65	74.074	Chrysemys_picta_bellii
ENSMAUG00000010289	-	72	89.091	ENSCSAVG00000007498	-	63	89.091	Ciona_savignyi
ENSMAUG00000010289	-	96	74.699	ENSCGRG00001017100	-	97	74.699	Cricetulus_griseus_chok1gshd
ENSMAUG00000010289	-	86	70.833	ENSCGRG00001008965	-	65	71.084	Cricetulus_griseus_chok1gshd
ENSMAUG00000010289	-	92	70.130	ENSCGRG00000018878	-	96	70.130	Cricetulus_griseus_crigri
ENSMAUG00000010289	-	96	74.699	ENSCGRG00000000336	-	97	74.699	Cricetulus_griseus_crigri
ENSMAUG00000010289	-	86	70.833	ENSCSEG00000004748	snrpf	97	71.084	Cynoglossus_semilaevis
ENSMAUG00000010289	-	86	72.222	ENSCVAG00000000397	snrpf	66	72.289	Cyprinodon_variegatus
ENSMAUG00000010289	-	66	90.385	ENSDARG00000105037	snrpf	97	70.588	Danio_rerio
ENSMAUG00000010289	-	76	93.443	ENSDNOG00000048989	-	54	93.443	Dasypus_novemcinctus
ENSMAUG00000010289	-	66	82.000	ENSDNOG00000049373	-	53	77.049	Dasypus_novemcinctus
ENSMAUG00000010289	-	96	74.699	ENSDNOG00000043775	-	53	74.699	Dasypus_novemcinctus
ENSMAUG00000010289	-	82	66.667	ENSDORG00000025351	-	96	66.667	Dipodomys_ordii
ENSMAUG00000010289	-	76	91.803	ENSDORG00000029740	-	74	91.803	Dipodomys_ordii
ENSMAUG00000010289	-	76	73.770	FBgn0000426	SmF	69	73.770	Drosophila_melanogaster
ENSMAUG00000010289	-	96	74.699	ENSETEG00000001558	-	97	74.699	Echinops_telfairi
ENSMAUG00000010289	-	75	72.414	ENSEBUG00000001793	-	62	72.414	Eptatretus_burgeri
ENSMAUG00000010289	-	76	93.443	ENSECAG00000019817	SNRPF	50	93.443	Equus_caballus
ENSMAUG00000010289	-	76	93.443	ENSEEUG00000013509	SNRPF	72	93.443	Erinaceus_europaeus
ENSMAUG00000010289	-	86	72.222	ENSELUG00000003121	RUXF	97	72.289	Esox_lucius
ENSMAUG00000010289	-	96	68.675	ENSELUG00000007737	RUXF	95	68.675	Esox_lucius
ENSMAUG00000010289	-	93	56.790	ENSFCAG00000031148	-	74	56.790	Felis_catus
ENSMAUG00000010289	-	96	74.699	ENSFCAG00000029966	-	97	74.699	Felis_catus
ENSMAUG00000010289	-	61	76.087	ENSFCAG00000021942	-	65	75.439	Felis_catus
ENSMAUG00000010289	-	96	74.699	ENSFALG00000010799	SNRPF	97	74.699	Ficedula_albicollis
ENSMAUG00000010289	-	96	74.699	ENSFDAG00000002831	-	97	74.699	Fukomys_damarensis
ENSMAUG00000010289	-	86	72.222	ENSFHEG00000003240	snrpf	73	72.289	Fundulus_heteroclitus
ENSMAUG00000010289	-	66	94.000	ENSGMOG00000007741	snrpf	72	90.164	Gadus_morhua
ENSMAUG00000010289	-	96	74.699	ENSGALG00000011409	SNRPF	97	74.699	Gallus_gallus
ENSMAUG00000010289	-	89	70.667	ENSGAFG00000016187	snrpf	99	70.930	Gambusia_affinis
ENSMAUG00000010289	-	66	92.000	ENSGACG00000020055	snrpf	72	88.525	Gasterosteus_aculeatus
ENSMAUG00000010289	-	82	63.768	ENSGAGG00000014132	-	93	55.422	Gopherus_agassizii
ENSMAUG00000010289	-	92	77.922	ENSGAGG00000022991	-	91	77.922	Gopherus_agassizii
ENSMAUG00000010289	-	75	94.737	ENSGAGG00000011163	-	100	94.737	Gopherus_agassizii
ENSMAUG00000010289	-	76	91.525	ENSGAGG00000012945	-	54	91.525	Gopherus_agassizii
ENSMAUG00000010289	-	68	69.492	ENSGAGG00000020974	-	50	69.492	Gopherus_agassizii
ENSMAUG00000010289	-	96	74.699	ENSGGOG00000001127	-	97	74.699	Gorilla_gorilla
ENSMAUG00000010289	-	89	69.118	ENSGGOG00000039564	-	90	69.118	Gorilla_gorilla
ENSMAUG00000010289	-	80	81.250	ENSGGOG00000039936	-	82	81.250	Gorilla_gorilla
ENSMAUG00000010289	-	96	74.699	ENSHGLG00000009108	SNRPF	97	74.699	Heterocephalus_glaber_female
ENSMAUG00000010289	-	96	73.494	ENSHGLG00000021172	-	97	73.494	Heterocephalus_glaber_female
ENSMAUG00000010289	-	76	93.443	ENSHGLG00100008103	-	72	93.443	Heterocephalus_glaber_male
ENSMAUG00000010289	-	96	73.494	ENSHGLG00100019596	-	97	73.494	Heterocephalus_glaber_male
ENSMAUG00000010289	-	72	59.420	ENSHCOG00000018663	snrpf	54	59.420	Hippocampus_comes
ENSMAUG00000010289	-	66	94.000	ENSIPUG00000018994	snrpf	97	72.289	Ictalurus_punctatus
ENSMAUG00000010289	-	96	74.699	ENSSTOG00000010434	-	97	74.699	Ictidomys_tridecemlineatus
ENSMAUG00000010289	-	88	70.667	ENSJJAG00000004558	-	89	70.667	Jaculus_jaculus
ENSMAUG00000010289	-	76	93.220	ENSJJAG00000004828	-	91	93.220	Jaculus_jaculus
ENSMAUG00000010289	-	96	74.699	ENSJJAG00000011272	-	97	74.699	Jaculus_jaculus
ENSMAUG00000010289	-	76	84.746	ENSJJAG00000010502	-	70	84.746	Jaculus_jaculus
ENSMAUG00000010289	-	66	94.000	ENSKMAG00000013566	snrpf	71	90.164	Kryptolebias_marmoratus
ENSMAUG00000010289	-	66	92.000	ENSLBEG00000008800	snrpf	71	88.525	Labrus_bergylta
ENSMAUG00000010289	-	96	74.699	ENSLACG00000002456	-	71	74.699	Latimeria_chalumnae
ENSMAUG00000010289	-	86	70.833	ENSLOCG00000015744	snrpf	97	71.084	Lepisosteus_oculatus
ENSMAUG00000010289	-	96	74.699	ENSLAFG00000017426	SNRPF	97	74.699	Loxodonta_africana
ENSMAUG00000010289	-	66	92.000	ENSMAMG00000016593	snrpf	72	88.525	Mastacembelus_armatus
ENSMAUG00000010289	-	66	94.000	ENSMZEG00005014701	snrpf	72	90.164	Maylandia_zebra
ENSMAUG00000010289	-	76	93.443	ENSMGAG00000011453	-	55	93.443	Meleagris_gallopavo
ENSMAUG00000010289	-	86	72.222	ENSMICG00000030494	-	66	72.289	Microcebus_murinus
ENSMAUG00000010289	-	96	74.699	ENSMICG00000012153	-	97	74.699	Microcebus_murinus
ENSMAUG00000010289	-	66	80.000	ENSMOCG00000020220	-	77	80.000	Microtus_ochrogaster
ENSMAUG00000010289	-	66	84.000	ENSMOCG00000022166	-	62	82.456	Microtus_ochrogaster
ENSMAUG00000010289	-	96	74.699	ENSMOCG00000020437	Snrpf	97	74.699	Microtus_ochrogaster
ENSMAUG00000010289	-	66	92.000	ENSMMOG00000007127	snrpf	71	88.525	Mola_mola
ENSMAUG00000010289	-	76	93.443	ENSMODG00000008091	SNRPF	54	93.443	Monodelphis_domestica
ENSMAUG00000010289	-	66	94.000	ENSMALG00000012328	snrpf	72	90.164	Monopterus_albus
ENSMAUG00000010289	-	96	74.699	MGP_CAROLIEiJ_G0015735	-	97	74.699	Mus_caroli
ENSMAUG00000010289	-	96	74.699	ENSMUSG00000020018	Snrpf	97	74.699	Mus_musculus
ENSMAUG00000010289	-	96	74.699	MGP_PahariEiJ_G0031350	Snrpf	97	74.699	Mus_pahari
ENSMAUG00000010289	-	96	74.699	MGP_SPRETEiJ_G0016553	Snrpf	97	74.699	Mus_spretus
ENSMAUG00000010289	-	96	74.699	ENSMPUG00000007176	-	74	74.699	Mustela_putorius_furo
ENSMAUG00000010289	-	76	93.443	ENSMLUG00000027932	-	58	93.443	Myotis_lucifugus
ENSMAUG00000010289	-	76	93.443	ENSMLUG00000013577	-	72	93.443	Myotis_lucifugus
ENSMAUG00000010289	-	76	93.443	ENSMLUG00000026149	-	58	93.443	Myotis_lucifugus
ENSMAUG00000010289	-	96	60.241	ENSMLUG00000026269	-	78	60.241	Myotis_lucifugus
ENSMAUG00000010289	-	76	93.443	ENSMLUG00000029201	-	58	93.443	Myotis_lucifugus
ENSMAUG00000010289	-	96	74.699	ENSNGAG00000024292	-	97	74.699	Nannospalax_galili
ENSMAUG00000010289	-	76	81.034	ENSNGAG00000005851	-	68	81.034	Nannospalax_galili
ENSMAUG00000010289	-	66	94.000	ENSNBRG00000011682	snrpf	62	90.164	Neolamprologus_brichardi
ENSMAUG00000010289	-	86	44.444	ENSMEUG00000000671	SNRPF	98	48.193	Notamacropus_eugenii
ENSMAUG00000010289	-	96	74.699	ENSODEG00000010328	-	97	74.699	Octodon_degus
ENSMAUG00000010289	-	96	74.699	ENSOCUG00000010925	SNRPF	73	74.699	Oryctolagus_cuniculus
ENSMAUG00000010289	-	66	90.000	ENSORLG00020008216	snrpf	71	86.885	Oryzias_latipes_hni
ENSMAUG00000010289	-	66	90.000	ENSORLG00015007418	snrpf	71	86.885	Oryzias_latipes_hsok
ENSMAUG00000010289	-	66	92.000	ENSOMEG00000003018	snrpf	72	88.525	Oryzias_melastigma
ENSMAUG00000010289	-	86	73.611	ENSOGAG00000030323	-	97	72.289	Otolemur_garnettii
ENSMAUG00000010289	-	96	74.699	ENSOARG00000011853	-	72	74.699	Ovis_aries
ENSMAUG00000010289	-	82	70.968	ENSPPAG00000037479	-	82	70.968	Pan_paniscus
ENSMAUG00000010289	-	80	82.812	ENSPPAG00000037544	-	82	82.812	Pan_paniscus
ENSMAUG00000010289	-	96	74.699	ENSPPRG00000005875	-	97	74.699	Panthera_pardus
ENSMAUG00000010289	-	93	56.790	ENSPPRG00000007449	-	83	56.790	Panthera_pardus
ENSMAUG00000010289	-	93	58.025	ENSPTIG00000005117	-	96	58.025	Panthera_tigris_altaica
ENSMAUG00000010289	-	96	74.699	ENSPTIG00000007520	SNRPF	97	74.699	Panthera_tigris_altaica
ENSMAUG00000010289	-	80	82.812	ENSPTRG00000043814	-	82	82.812	Pan_troglodytes
ENSMAUG00000010289	-	89	64.706	ENSPTRG00000047717	-	91	64.706	Pan_troglodytes
ENSMAUG00000010289	-	86	72.222	ENSPKIG00000014784	snrpf	91	72.289	Paramormyrops_kingsleyae
ENSMAUG00000010289	-	96	74.699	ENSPSIG00000016462	SNRPF	97	74.699	Pelodiscus_sinensis
ENSMAUG00000010289	-	66	92.000	ENSPMGG00000023548	snrpf	71	88.525	Periophthalmus_magnuspinnatus
ENSMAUG00000010289	-	96	74.699	ENSPEMG00000023326	Snrpf	97	74.699	Peromyscus_maniculatus_bairdii
ENSMAUG00000010289	-	66	94.000	ENSPLAG00000023932	snrpf	72	90.164	Poecilia_latipinna
ENSMAUG00000010289	-	66	94.000	ENSPMEG00000003377	snrpf	72	90.164	Poecilia_mexicana
ENSMAUG00000010289	-	66	94.000	ENSPREG00000022635	snrpf	95	72.289	Poecilia_reticulata
ENSMAUG00000010289	-	96	74.699	ENSPPYG00000004847	-	97	74.699	Pongo_abelii
ENSMAUG00000010289	-	96	74.699	ENSPCOG00000023833	-	97	74.699	Propithecus_coquereli
ENSMAUG00000010289	-	96	74.699	ENSPVAG00000009036	SNRPF	97	74.699	Pteropus_vampyrus
ENSMAUG00000010289	-	66	94.000	ENSPNYG00000021712	snrpf	72	90.164	Pundamilia_nyererei
ENSMAUG00000010289	-	66	92.000	ENSPNAG00000019117	snrpf	72	88.525	Pygocentrus_nattereri
ENSMAUG00000010289	-	96	74.699	ENSRNOG00000005556	Snrpf	97	74.699	Rattus_norvegicus
ENSMAUG00000010289	-	86	72.222	ENSRBIG00000030414	-	93	71.250	Rhinopithecus_bieti
ENSMAUG00000010289	-	86	72.222	ENSRROG00000021975	-	97	71.084	Rhinopithecus_roxellana
ENSMAUG00000010289	-	83	46.479	YPR182W	SMX3	83	46.479	Saccharomyces_cerevisiae
ENSMAUG00000010289	-	66	78.000	ENSSBOG00000027638	-	70	77.049	Saimiri_boliviensis_boliviensis
ENSMAUG00000010289	-	86	62.500	ENSSBOG00000032297	-	96	63.855	Saimiri_boliviensis_boliviensis
ENSMAUG00000010289	-	96	74.699	ENSSBOG00000036179	-	97	74.699	Saimiri_boliviensis_boliviensis
ENSMAUG00000010289	-	96	74.699	ENSSBOG00000012868	-	97	74.699	Saimiri_boliviensis_boliviensis
ENSMAUG00000010289	-	76	93.443	ENSSHAG00000012294	SNRPF	55	93.443	Sarcophilus_harrisii
ENSMAUG00000010289	-	72	67.742	ENSSFOG00015021523	snrpf	93	67.742	Scleropages_formosus
ENSMAUG00000010289	-	66	92.000	ENSSMAG00000005533	snrpf	70	88.525	Scophthalmus_maximus
ENSMAUG00000010289	-	72	67.742	ENSSDUG00000016283	snrpf	74	67.742	Seriola_dumerili
ENSMAUG00000010289	-	88	71.622	ENSSLDG00000005119	snrpf	99	71.765	Seriola_lalandi_dorsalis
ENSMAUG00000010289	-	72	80.357	ENSSLDG00000003885	-	68	80.357	Seriola_lalandi_dorsalis
ENSMAUG00000010289	-	76	93.443	ENSSPUG00000014590	-	72	93.443	Sphenodon_punctatus
ENSMAUG00000010289	-	86	72.222	ENSSPAG00000003283	snrpf	94	72.289	Stegastes_partitus
ENSMAUG00000010289	-	96	74.699	ENSSSCG00000000895	SNRPF	97	74.699	Sus_scrofa
ENSMAUG00000010289	-	66	92.000	ENSTRUG00000014956	snrpf	88	88.525	Takifugu_rubripes
ENSMAUG00000010289	-	66	92.000	ENSTNIG00000012672	snrpf	71	88.525	Tetraodon_nigroviridis
ENSMAUG00000010289	-	86	44.444	ENSTTRG00000006070	SNRPF	97	48.193	Tursiops_truncatus
ENSMAUG00000010289	-	76	85.000	ENSUAMG00000001101	-	71	85.000	Ursus_americanus
ENSMAUG00000010289	-	96	74.699	ENSUAMG00000008176	-	97	74.699	Ursus_americanus
ENSMAUG00000010289	-	66	90.000	ENSUMAG00000006177	-	71	83.333	Ursus_maritimus
ENSMAUG00000010289	-	96	74.699	ENSUMAG00000003528	-	97	74.699	Ursus_maritimus
ENSMAUG00000010289	-	96	74.699	ENSVPAG00000008712	-	97	74.699	Vicugna_pacos
ENSMAUG00000010289	-	89	68.000	ENSVVUG00000023821	-	96	68.000	Vulpes_vulpes
ENSMAUG00000010289	-	86	50.000	ENSXETG00000021630	snrpf	98	52.941	Xenopus_tropicalis
ENSMAUG00000010289	-	86	72.222	ENSXCOG00000013860	snrpf	95	72.289	Xiphophorus_couchianus
ENSMAUG00000010289	-	66	94.000	ENSXMAG00000015448	snrpf	72	90.164	Xiphophorus_maculatus