EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000010315 (Gene tree)
Gene ID: 101844478
Gene Symbol: R3hdm1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 91376 bases
Position: chrKB708221.1:3472594-3563969
Accession: 101844478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000009089	R3H	PF01424.22	2.5e-12	1	1
ENSMAUP00000009085	R3H	PF01424.22	6.6e-12	1	1
ENSMAUP00000009075	R3H	PF01424.22	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012919	-	4844	XM_005079876	ENSMAUP00000009075	1140 (aa)	XP_005079933	A0A1U7R5M3
ENSMAUT00000012929	-	1458	-	ENSMAUP00000009085	486 (aa)	-	-
ENSMAUT00000012933	-	861	-	ENSMAUP00000009089	287 (aa)	-	-
ENSMAUT00000012888	-	4743	-	ENSMAUP00000009045	390 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000010315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000010315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000010315	R3hdm1	86	54.042	ENSMAUG00000021700	Arpp21	89	53.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000010315	R3hdm1	99	95.760	ENSG00000048991	R3HDM1	99	95.760	Homo_sapiens
ENSMAUG00000010315	R3hdm1	100	64.548	ENSAPOG00000020850	r3hdm1	97	48.844	Acanthochromis_polyacanthus
ENSMAUG00000010315	R3hdm1	100	91.694	ENSAMEG00000014886	R3HDM1	100	89.211	Ailuropoda_melanoleuca
ENSMAUG00000010315	R3hdm1	90	54.911	ENSACIG00000018791	-	81	56.691	Amphilophus_citrinellus
ENSMAUG00000010315	R3hdm1	100	64.883	ENSAOCG00000005192	r3hdm1	99	48.333	Amphiprion_ocellaris
ENSMAUG00000010315	R3hdm1	100	59.727	ENSAPEG00000016108	r3hdm1	99	46.438	Amphiprion_percula
ENSMAUG00000010315	R3hdm1	100	58.904	ENSATEG00000000232	r3hdm1	99	44.837	Anabas_testudineus
ENSMAUG00000010315	R3hdm1	100	79.402	ENSAPLG00000015231	R3HDM1	100	75.394	Anas_platyrhynchos
ENSMAUG00000010315	R3hdm1	100	77.245	ENSACAG00000001676	R3HDM1	100	77.594	Anolis_carolinensis
ENSMAUG00000010315	R3hdm1	100	92.593	ENSANAG00000035334	R3HDM1	100	88.596	Aotus_nancymaae
ENSMAUG00000010315	R3hdm1	100	57.679	ENSACLG00000027282	r3hdm1	94	47.482	Astatotilapia_calliptera
ENSMAUG00000010315	R3hdm1	100	61.935	ENSAMXG00000003536	r3hdm1	100	62.558	Astyanax_mexicanus
ENSMAUG00000010315	R3hdm1	99	68.627	ENSAMXG00000012861	R3HDM1	100	71.154	Astyanax_mexicanus
ENSMAUG00000010315	R3hdm1	79	57.205	ENSAMXG00000020587	arpp21	84	58.537	Astyanax_mexicanus
ENSMAUG00000010315	R3hdm1	100	90.272	ENSBTAG00000013302	R3HDM1	100	90.535	Bos_taurus
ENSMAUG00000010315	R3hdm1	100	92.593	ENSCJAG00000011718	R3HDM1	100	88.246	Callithrix_jacchus
ENSMAUG00000010315	R3hdm1	100	91.694	ENSCAFG00000005075	R3HDM1	100	89.211	Canis_familiaris
ENSMAUG00000010315	R3hdm1	100	92.929	ENSCAFG00020016119	R3HDM1	100	91.842	Canis_lupus_dingo
ENSMAUG00000010315	R3hdm1	100	90.698	ENSCHIG00000020851	R3HDM1	100	90.535	Capra_hircus
ENSMAUG00000010315	R3hdm1	100	81.533	ENSCAPG00000013043	-	100	81.533	Cavia_aperea
ENSMAUG00000010315	R3hdm1	100	91.638	ENSCPOG00000012784	R3HDM1	100	91.638	Cavia_porcellus
ENSMAUG00000010315	R3hdm1	100	93.004	ENSCCAG00000027199	R3HDM1	100	88.421	Cebus_capucinus
ENSMAUG00000010315	R3hdm1	100	90.698	ENSCATG00000023642	R3HDM1	100	90.184	Cercocebus_atys
ENSMAUG00000010315	R3hdm1	100	94.077	ENSCLAG00000007962	R3HDM1	100	94.077	Chinchilla_lanigera
ENSMAUG00000010315	R3hdm1	100	91.030	ENSCSAG00000016356	R3HDM1	100	90.096	Chlorocebus_sabaeus
ENSMAUG00000010315	R3hdm1	88	75.880	ENSCHOG00000013638	R3HDM1	91	75.880	Choloepus_hoffmanni
ENSMAUG00000010315	R3hdm1	92	76.231	ENSCPBG00000009645	R3HDM1	100	77.844	Chrysemys_picta_bellii
ENSMAUG00000010315	R3hdm1	100	90.698	ENSCANG00000034748	R3HDM1	100	87.895	Colobus_angolensis_palliatus
ENSMAUG00000010315	R3hdm1	99	98.680	ENSCGRG00001012357	R3hdm1	97	98.680	Cricetulus_griseus_chok1gshd
ENSMAUG00000010315	R3hdm1	100	99.652	ENSCGRG00000012080	R3hdm1	100	99.652	Cricetulus_griseus_crigri
ENSMAUG00000010315	R3hdm1	100	59.184	ENSCSEG00000008944	r3hdm1	99	43.132	Cynoglossus_semilaevis
ENSMAUG00000010315	R3hdm1	100	63.880	ENSCVAG00000007582	r3hdm1	99	47.070	Cyprinodon_variegatus
ENSMAUG00000010315	R3hdm1	79	55.263	ENSDARG00000061081	arpp21	60	42.308	Danio_rerio
ENSMAUG00000010315	R3hdm1	100	84.917	ENSDNOG00000000771	R3HDM1	100	84.917	Dasypus_novemcinctus
ENSMAUG00000010315	R3hdm1	100	97.213	ENSDORG00000027689	-	100	97.213	Dipodomys_ordii
ENSMAUG00000010315	R3hdm1	100	87.043	ENSETEG00000013606	R3HDM1	100	77.301	Echinops_telfairi
ENSMAUG00000010315	R3hdm1	87	48.673	ENSEBUG00000014746	arpp21	97	39.971	Eptatretus_burgeri
ENSMAUG00000010315	R3hdm1	100	91.694	ENSEASG00005007392	R3HDM1	100	95.813	Equus_asinus_asinus
ENSMAUG00000010315	R3hdm1	100	96.167	ENSECAG00000019114	R3HDM1	100	95.813	Equus_caballus
ENSMAUG00000010315	R3hdm1	100	78.738	ENSEEUG00000012589	R3HDM1	89	83.784	Erinaceus_europaeus
ENSMAUG00000010315	R3hdm1	83	73.913	ENSELUG00000004909	R3HDM1	93	57.958	Esox_lucius
ENSMAUG00000010315	R3hdm1	77	69.196	ENSELUG00000014413	r3hdm1	100	50.958	Esox_lucius
ENSMAUG00000010315	R3hdm1	100	93.416	ENSFCAG00000027113	R3HDM1	100	96.305	Felis_catus
ENSMAUG00000010315	R3hdm1	100	79.070	ENSFALG00000013731	R3HDM1	93	69.231	Ficedula_albicollis
ENSMAUG00000010315	R3hdm1	100	94.425	ENSFDAG00000016478	R3HDM1	100	94.425	Fukomys_damarensis
ENSMAUG00000010315	R3hdm1	100	65.870	ENSFHEG00000018713	r3hdm1	99	47.032	Fundulus_heteroclitus
ENSMAUG00000010315	R3hdm1	78	71.618	ENSGMOG00000006042	-	74	67.174	Gadus_morhua
ENSMAUG00000010315	R3hdm1	100	74.394	ENSGALG00000012246	R3HDM1	99	85.574	Gallus_gallus
ENSMAUG00000010315	R3hdm1	100	60.410	ENSGAFG00000006203	r3hdm1	99	44.331	Gambusia_affinis
ENSMAUG00000010315	R3hdm1	80	72.034	ENSGACG00000014925	r3hdm1	99	48.667	Gasterosteus_aculeatus
ENSMAUG00000010315	R3hdm1	95	85.383	ENSGAGG00000007840	R3HDM1	96	83.292	Gopherus_agassizii
ENSMAUG00000010315	R3hdm1	100	95.819	ENSGGOG00000008156	R3HDM1	100	88.158	Gorilla_gorilla
ENSMAUG00000010315	R3hdm1	100	62.876	ENSHBUG00000015737	R3HDM1	90	58.015	Haplochromis_burtoni
ENSMAUG00000010315	R3hdm1	100	94.425	ENSHGLG00000015718	R3HDM1	100	94.425	Heterocephalus_glaber_female
ENSMAUG00000010315	R3hdm1	100	66.053	ENSHGLG00100015374	-	100	65.965	Heterocephalus_glaber_male
ENSMAUG00000010315	R3hdm1	100	94.077	ENSHGLG00100003184	-	100	94.077	Heterocephalus_glaber_male
ENSMAUG00000010315	R3hdm1	56	58.896	ENSHCOG00000005036	-	63	40.682	Hippocampus_comes
ENSMAUG00000010315	R3hdm1	84	59.472	ENSHCOG00000013366	r3hdm1	88	60.500	Hippocampus_comes
ENSMAUG00000010315	R3hdm1	91	61.978	ENSIPUG00000013629	r3hdm1	95	68.847	Ictalurus_punctatus
ENSMAUG00000010315	R3hdm1	99	69.831	ENSIPUG00000001676	R3HDM1	99	65.550	Ictalurus_punctatus
ENSMAUG00000010315	R3hdm1	100	95.122	ENSSTOG00000007572	R3HDM1	100	95.122	Ictidomys_tridecemlineatus
ENSMAUG00000010315	R3hdm1	100	95.470	ENSJJAG00000018208	-	100	95.470	Jaculus_jaculus
ENSMAUG00000010315	R3hdm1	56	75.439	ENSKMAG00000013373	-	86	75.439	Kryptolebias_marmoratus
ENSMAUG00000010315	R3hdm1	100	58.020	ENSLBEG00000027981	-	94	60.277	Labrus_bergylta
ENSMAUG00000010315	R3hdm1	100	75.000	ENSLACG00000005334	R3HDM1	100	72.072	Latimeria_chalumnae
ENSMAUG00000010315	R3hdm1	99	72.697	ENSLOCG00000001641	r3hdm1	100	65.979	Lepisosteus_oculatus
ENSMAUG00000010315	R3hdm1	100	90.789	ENSLAFG00000009065	R3HDM1	100	90.789	Loxodonta_africana
ENSMAUG00000010315	R3hdm1	100	91.362	ENSMFAG00000030331	R3HDM1	100	96.305	Macaca_fascicularis
ENSMAUG00000010315	R3hdm1	100	91.362	ENSMMUG00000009844	R3HDM1	100	86.812	Macaca_mulatta
ENSMAUG00000010315	R3hdm1	100	91.362	ENSMNEG00000027793	R3HDM1	100	96.305	Macaca_nemestrina
ENSMAUG00000010315	R3hdm1	100	91.362	ENSMLEG00000043189	R3HDM1	100	88.158	Mandrillus_leucophaeus
ENSMAUG00000010315	R3hdm1	100	65.188	ENSMAMG00000004532	r3hdm1	99	48.656	Mastacembelus_armatus
ENSMAUG00000010315	R3hdm1	100	62.876	ENSMZEG00005003157	r3hdm1	99	47.436	Maylandia_zebra
ENSMAUG00000010315	R3hdm1	100	78.738	ENSMGAG00000012461	R3HDM1	100	73.913	Meleagris_gallopavo
ENSMAUG00000010315	R3hdm1	100	84.669	ENSMICG00000042655	-	100	85.222	Microcebus_murinus
ENSMAUG00000010315	R3hdm1	100	93.416	ENSMICG00000005900	-	100	87.828	Microcebus_murinus
ENSMAUG00000010315	R3hdm1	100	99.652	ENSMOCG00000019833	-	100	99.652	Microtus_ochrogaster
ENSMAUG00000010315	R3hdm1	100	81.410	ENSMODG00000000923	R3HDM1	97	78.693	Monodelphis_domestica
ENSMAUG00000010315	R3hdm1	100	65.306	ENSMALG00000009000	r3hdm1	100	46.160	Monopterus_albus
ENSMAUG00000010315	R3hdm1	100	98.955	MGP_CAROLIEiJ_G0014543	R3hdm1	100	98.955	Mus_caroli
ENSMAUG00000010315	R3hdm1	100	98.955	ENSMUSG00000056211	R3hdm1	100	98.955	Mus_musculus
ENSMAUG00000010315	R3hdm1	100	98.606	MGP_PahariEiJ_G0027779	R3hdm1	100	98.606	Mus_pahari
ENSMAUG00000010315	R3hdm1	100	98.955	MGP_SPRETEiJ_G0015350	R3hdm1	100	98.955	Mus_spretus
ENSMAUG00000010315	R3hdm1	100	91.694	ENSMPUG00000002412	R3HDM1	100	88.772	Mustela_putorius_furo
ENSMAUG00000010315	R3hdm1	100	91.030	ENSMLUG00000013824	R3HDM1	100	88.158	Myotis_lucifugus
ENSMAUG00000010315	R3hdm1	100	96.516	ENSNGAG00000001313	-	100	96.516	Nannospalax_galili
ENSMAUG00000010315	R3hdm1	100	90.698	ENSNLEG00000008622	R3HDM1	100	88.158	Nomascus_leucogenys
ENSMAUG00000010315	R3hdm1	85	73.253	ENSMEUG00000011784	R3HDM1	100	68.627	Notamacropus_eugenii
ENSMAUG00000010315	R3hdm1	100	95.122	ENSODEG00000008607	R3HDM1	100	95.122	Octodon_degus
ENSMAUG00000010315	R3hdm1	80	71.008	ENSONIG00000012017	r3hdm1	98	46.524	Oreochromis_niloticus
ENSMAUG00000010315	R3hdm1	100	86.047	ENSOANG00000007987	R3HDM1	100	77.293	Ornithorhynchus_anatinus
ENSMAUG00000010315	R3hdm1	100	90.698	ENSOCUG00000017366	R3HDM1	98	87.463	Oryctolagus_cuniculus
ENSMAUG00000010315	R3hdm1	100	64.846	ENSORLG00000004297	r3hdm1	99	46.717	Oryzias_latipes
ENSMAUG00000010315	R3hdm1	100	64.846	ENSORLG00020019252	-	93	60.287	Oryzias_latipes_hni
ENSMAUG00000010315	R3hdm1	100	64.846	ENSORLG00015017355	r3hdm1	99	46.667	Oryzias_latipes_hsok
ENSMAUG00000010315	R3hdm1	100	63.279	ENSOMEG00000003882	-	94	58.317	Oryzias_melastigma
ENSMAUG00000010315	R3hdm1	100	90.698	ENSOGAG00000003136	R3HDM1	100	88.070	Otolemur_garnettii
ENSMAUG00000010315	R3hdm1	100	90.698	ENSOARG00000010788	R3HDM1	100	87.632	Ovis_aries
ENSMAUG00000010315	R3hdm1	100	91.362	ENSPPAG00000027858	R3HDM1	100	88.509	Pan_paniscus
ENSMAUG00000010315	R3hdm1	100	93.621	ENSPPRG00000002626	R3HDM1	100	88.684	Panthera_pardus
ENSMAUG00000010315	R3hdm1	100	93.621	ENSPTIG00000016581	R3HDM1	100	88.421	Panthera_tigris_altaica
ENSMAUG00000010315	R3hdm1	100	91.362	ENSPTRG00000012494	R3HDM1	100	87.368	Pan_troglodytes
ENSMAUG00000010315	R3hdm1	100	91.362	ENSPANG00000026448	R3HDM1	100	88.070	Papio_anubis
ENSMAUG00000010315	R3hdm1	100	65.862	ENSPKIG00000011224	R3HDM1	90	63.504	Paramormyrops_kingsleyae
ENSMAUG00000010315	R3hdm1	97	66.549	ENSPKIG00000004328	r3hdm1	91	75.238	Paramormyrops_kingsleyae
ENSMAUG00000010315	R3hdm1	100	79.734	ENSPSIG00000012915	R3HDM1	100	74.366	Pelodiscus_sinensis
ENSMAUG00000010315	R3hdm1	87	53.691	ENSPMGG00000011264	-	91	54.233	Periophthalmus_magnuspinnatus
ENSMAUG00000010315	R3hdm1	100	99.652	ENSPEMG00000015187	R3hdm1	100	99.652	Peromyscus_maniculatus_bairdii
ENSMAUG00000010315	R3hdm1	100	89.965	ENSPCIG00000002491	R3HDM1	100	89.216	Phascolarctos_cinereus
ENSMAUG00000010315	R3hdm1	100	62.914	ENSPFOG00000015036	r3hdm1	99	46.961	Poecilia_formosa
ENSMAUG00000010315	R3hdm1	100	58.784	ENSPLAG00000018042	r3hdm1	99	43.930	Poecilia_latipinna
ENSMAUG00000010315	R3hdm1	100	58.784	ENSPMEG00000023947	r3hdm1	99	44.156	Poecilia_mexicana
ENSMAUG00000010315	R3hdm1	100	64.164	ENSPREG00000007902	r3hdm1	88	61.520	Poecilia_reticulata
ENSMAUG00000010315	R3hdm1	100	87.117	ENSPPYG00000012815	R3HDM1	100	85.864	Pongo_abelii
ENSMAUG00000010315	R3hdm1	100	87.708	ENSPCAG00000006208	R3HDM1	100	76.579	Procavia_capensis
ENSMAUG00000010315	R3hdm1	100	87.654	ENSPCOG00000012698	R3HDM1	100	86.165	Propithecus_coquereli
ENSMAUG00000010315	R3hdm1	100	81.728	ENSPVAG00000006098	R3HDM1	100	78.174	Pteropus_vampyrus
ENSMAUG00000010315	R3hdm1	100	62.876	ENSPNYG00000008701	-	97	60.284	Pundamilia_nyererei
ENSMAUG00000010315	R3hdm1	93	63.318	ENSPNAG00000013952	r3hdm1	100	63.232	Pygocentrus_nattereri
ENSMAUG00000010315	R3hdm1	83	49.265	ENSPNAG00000004162	arpp21	69	40.283	Pygocentrus_nattereri
ENSMAUG00000010315	R3hdm1	84	75.962	ENSPNAG00000005436	R3HDM1	99	75.884	Pygocentrus_nattereri
ENSMAUG00000010315	R3hdm1	100	95.526	ENSRNOG00000004099	R3hdm1	100	95.526	Rattus_norvegicus
ENSMAUG00000010315	R3hdm1	100	87.043	ENSRBIG00000033317	R3HDM1	100	97.786	Rhinopithecus_bieti
ENSMAUG00000010315	R3hdm1	100	91.362	ENSRROG00000034534	R3HDM1	100	87.544	Rhinopithecus_roxellana
ENSMAUG00000010315	R3hdm1	100	92.387	ENSSBOG00000020389	R3HDM1	100	88.246	Saimiri_boliviensis_boliviensis
ENSMAUG00000010315	R3hdm1	100	86.093	ENSSHAG00000016999	R3HDM1	100	80.035	Sarcophilus_harrisii
ENSMAUG00000010315	R3hdm1	100	70.205	ENSSFOG00015014134	r3hdm1	100	69.903	Scleropages_formosus
ENSMAUG00000010315	R3hdm1	100	66.124	ENSSFOG00015019851	-	99	56.463	Scleropages_formosus
ENSMAUG00000010315	R3hdm1	100	62.069	ENSSMAG00000001669	r3hdm1	99	43.515	Scophthalmus_maximus
ENSMAUG00000010315	R3hdm1	100	64.626	ENSSDUG00000010749	r3hdm1	99	46.488	Seriola_dumerili
ENSMAUG00000010315	R3hdm1	100	63.333	ENSSLDG00000004499	r3hdm1	99	45.998	Seriola_lalandi_dorsalis
ENSMAUG00000010315	R3hdm1	100	77.741	ENSSARG00000000352	-	69	82.392	Sorex_araneus
ENSMAUG00000010315	R3hdm1	100	80.795	ENSSPUG00000004167	R3HDM1	100	77.010	Sphenodon_punctatus
ENSMAUG00000010315	R3hdm1	100	65.870	ENSSPAG00000004648	r3hdm1	99	48.187	Stegastes_partitus
ENSMAUG00000010315	R3hdm1	100	95.470	ENSSSCG00000015692	R3HDM1	100	91.236	Sus_scrofa
ENSMAUG00000010315	R3hdm1	100	78.738	ENSTGUG00000011750	R3HDM1	100	70.332	Taeniopygia_guttata
ENSMAUG00000010315	R3hdm1	89	59.556	ENSTRUG00000011654	r3hdm1	93	46.962	Takifugu_rubripes
ENSMAUG00000010315	R3hdm1	89	65.926	ENSTNIG00000010362	r3hdm1	95	44.919	Tetraodon_nigroviridis
ENSMAUG00000010315	R3hdm1	100	82.544	ENSTTRG00000003935	R3HDM1	100	82.632	Tursiops_truncatus
ENSMAUG00000010315	R3hdm1	100	91.694	ENSUAMG00000024806	R3HDM1	99	91.882	Ursus_americanus
ENSMAUG00000010315	R3hdm1	100	86.411	ENSUMAG00000005552	R3HDM1	100	86.207	Ursus_maritimus
ENSMAUG00000010315	R3hdm1	93	91.228	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSMAUG00000010315	R3hdm1	100	95.819	ENSVVUG00000006457	R3HDM1	100	91.667	Vulpes_vulpes
ENSMAUG00000010315	R3hdm1	86	81.710	ENSXETG00000019330	r3hdm1	100	63.830	Xenopus_tropicalis
ENSMAUG00000010315	R3hdm1	83	60.900	ENSXCOG00000017448	r3hdm1	94	47.101	Xiphophorus_couchianus
ENSMAUG00000010315	R3hdm1	100	64.548	ENSXMAG00000007885	r3hdm1	99	47.325	Xiphophorus_maculatus