EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000010381 (Gene tree)
Gene ID: 101825857
Gene Symbol: Smg5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 28228 bases
Position: chrKB708224.1:4894551-4922778
Accession: 101825857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000009136	EST1	PF10374.9	7.1e-24	1	1
ENSMAUP00000009136	EST1_DNA_bind	PF10373.9	7.5e-40	1	2
ENSMAUP00000009136	EST1_DNA_bind	PF10373.9	7.5e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000012981	-	4412	XM_005080118	ENSMAUP00000009136	1017 (aa)	XP_005080175	A0A1U7R3B5

Gene Model

Click here to download ENSMAUG00000010381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000010381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000010381	Smg5	55	44.367	ENSMAUG00000000043	-	96	44.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000010381	Smg5	100	91.847	ENSG00000198952	SMG5	100	92.043	Homo_sapiens
ENSMAUG00000010381	Smg5	99	67.157	ENSAPOG00000019690	smg5	99	67.456	Acanthochromis_polyacanthus
ENSMAUG00000010381	Smg5	98	87.839	ENSAMEG00000014458	SMG5	100	88.040	Ailuropoda_melanoleuca
ENSMAUG00000010381	Smg5	99	64.334	ENSACIG00000001353	smg5	99	65.484	Amphilophus_citrinellus
ENSMAUG00000010381	Smg5	98	64.787	ENSAOCG00000019483	smg5	93	66.393	Amphiprion_ocellaris
ENSMAUG00000010381	Smg5	98	66.335	ENSAPEG00000022949	smg5	98	66.335	Amphiprion_percula
ENSMAUG00000010381	Smg5	99	65.134	ENSATEG00000005348	smg5	99	66.472	Anabas_testudineus
ENSMAUG00000010381	Smg5	98	77.313	ENSAPLG00000010263	SMG5	100	76.631	Anas_platyrhynchos
ENSMAUG00000010381	Smg5	100	91.356	ENSANAG00000032899	SMG5	100	91.552	Aotus_nancymaae
ENSMAUG00000010381	Smg5	99	64.865	ENSACLG00000009311	smg5	99	65.990	Astatotilapia_calliptera
ENSMAUG00000010381	Smg5	99	44.197	ENSBTAG00000021747	-	99	43.520	Bos_taurus
ENSMAUG00000010381	Smg5	100	90.472	ENSBTAG00000009435	SMG5	100	90.766	Bos_taurus
ENSMAUG00000010381	Smg5	100	91.257	ENSCJAG00000005684	SMG5	100	91.454	Callithrix_jacchus
ENSMAUG00000010381	Smg5	100	89.479	ENSCAFG00000016839	SMG5	100	89.872	Canis_familiaris
ENSMAUG00000010381	Smg5	100	89.479	ENSCAFG00020006061	SMG5	100	89.872	Canis_lupus_dingo
ENSMAUG00000010381	Smg5	100	90.373	ENSCHIG00000007709	SMG5	100	90.668	Capra_hircus
ENSMAUG00000010381	Smg5	99	44.109	ENSCHIG00000006323	-	99	44.227	Capra_hircus
ENSMAUG00000010381	Smg5	100	90.383	ENSTSYG00000004099	SMG5	100	90.579	Carlito_syrichta
ENSMAUG00000010381	Smg5	97	70.892	ENSCAPG00000003631	SMG5	100	71.963	Cavia_aperea
ENSMAUG00000010381	Smg5	100	91.061	ENSCPOG00000015696	SMG5	100	91.061	Cavia_porcellus
ENSMAUG00000010381	Smg5	100	91.061	ENSCCAG00000027409	SMG5	100	91.257	Cebus_capucinus
ENSMAUG00000010381	Smg5	100	92.043	ENSCATG00000030539	SMG5	100	92.240	Cercocebus_atys
ENSMAUG00000010381	Smg5	100	91.749	ENSCLAG00000003983	SMG5	100	91.552	Chinchilla_lanigera
ENSMAUG00000010381	Smg5	100	91.945	ENSCSAG00000002120	SMG5	100	92.141	Chlorocebus_sabaeus
ENSMAUG00000010381	Smg5	54	89.051	ENSCHOG00000008741	-	57	89.051	Choloepus_hoffmanni
ENSMAUG00000010381	Smg5	94	76.697	ENSCPBG00000025848	SMG5	100	77.360	Chrysemys_picta_bellii
ENSMAUG00000010381	Smg5	93	34.939	ENSCING00000008706	-	99	35.143	Ciona_intestinalis
ENSMAUG00000010381	Smg5	100	88.114	ENSCANG00000029208	SMG5	100	87.819	Colobus_angolensis_palliatus
ENSMAUG00000010381	Smg5	100	97.837	ENSCGRG00001006336	Smg5	100	97.837	Cricetulus_griseus_chok1gshd
ENSMAUG00000010381	Smg5	98	97.885	ENSCGRG00000005111	Smg5	100	97.883	Cricetulus_griseus_crigri
ENSMAUG00000010381	Smg5	99	64.321	ENSCSEG00000014220	smg5	99	64.902	Cynoglossus_semilaevis
ENSMAUG00000010381	Smg5	99	61.057	ENSCVAG00000000529	smg5	99	60.840	Cyprinodon_variegatus
ENSMAUG00000010381	Smg5	92	36.536	ENSDNOG00000039862	-	100	36.114	Dasypus_novemcinctus
ENSMAUG00000010381	Smg5	100	86.739	ENSDNOG00000000051	SMG5	100	86.837	Dasypus_novemcinctus
ENSMAUG00000010381	Smg5	100	91.356	ENSDORG00000010382	Smg5	100	90.963	Dipodomys_ordii
ENSMAUG00000010381	Smg5	71	30.256	FBgn0019890	Smg5	66	30.256	Drosophila_melanogaster
ENSMAUG00000010381	Smg5	82	92.233	ENSETEG00000010336	SMG5	91	92.233	Echinops_telfairi
ENSMAUG00000010381	Smg5	90	47.826	ENSEBUG00000003739	smg5	98	47.720	Eptatretus_burgeri
ENSMAUG00000010381	Smg5	100	91.061	ENSEASG00005019122	SMG5	100	90.864	Equus_asinus_asinus
ENSMAUG00000010381	Smg5	100	91.061	ENSECAG00000001389	SMG5	100	90.864	Equus_caballus
ENSMAUG00000010381	Smg5	72	95.677	ENSEEUG00000012690	SMG5	73	95.677	Erinaceus_europaeus
ENSMAUG00000010381	Smg5	99	65.507	ENSELUG00000012585	smg5	99	65.024	Esox_lucius
ENSMAUG00000010381	Smg5	100	88.802	ENSFCAG00000011783	SMG5	100	89.391	Felis_catus
ENSMAUG00000010381	Smg5	58	80.333	ENSFALG00000001166	-	99	79.667	Ficedula_albicollis
ENSMAUG00000010381	Smg5	98	89.627	ENSFDAG00000017388	SMG5	100	89.225	Fukomys_damarensis
ENSMAUG00000010381	Smg5	97	62.399	ENSFHEG00000013939	smg5	100	62.702	Fundulus_heteroclitus
ENSMAUG00000010381	Smg5	99	76.856	ENSGALG00000029918	-	100	76.616	Gallus_gallus
ENSMAUG00000010381	Smg5	72	76.056	ENSGAFG00000021691	smg5	95	68.690	Gambusia_affinis
ENSMAUG00000010381	Smg5	100	78.137	ENSGAGG00000016131	SMG5	100	78.137	Gopherus_agassizii
ENSMAUG00000010381	Smg5	100	91.552	ENSGGOG00000010932	SMG5	100	91.749	Gorilla_gorilla
ENSMAUG00000010381	Smg5	99	64.706	ENSHBUG00000008654	smg5	99	66.121	Haplochromis_burtoni
ENSMAUG00000010381	Smg5	100	89.194	ENSHGLG00000019152	SMG5	100	89.096	Heterocephalus_glaber_female
ENSMAUG00000010381	Smg5	89	89.133	ENSHGLG00100015948	SMG5	99	89.023	Heterocephalus_glaber_male
ENSMAUG00000010381	Smg5	86	72.616	ENSHCOG00000010229	smg5	92	72.372	Hippocampus_comes
ENSMAUG00000010381	Smg5	99	62.214	ENSIPUG00000006624	Smg5	99	62.216	Ictalurus_punctatus
ENSMAUG00000010381	Smg5	100	92.141	ENSSTOG00000001780	SMG5	100	92.338	Ictidomys_tridecemlineatus
ENSMAUG00000010381	Smg5	100	91.569	ENSJJAG00000022763	Smg5	100	91.765	Jaculus_jaculus
ENSMAUG00000010381	Smg5	50	60.440	ENSKMAG00000014586	smg5	99	61.348	Kryptolebias_marmoratus
ENSMAUG00000010381	Smg5	99	65.096	ENSLBEG00000002145	smg5	99	65.959	Labrus_bergylta
ENSMAUG00000010381	Smg5	100	63.533	ENSLACG00000010521	SMG5	100	63.680	Latimeria_chalumnae
ENSMAUG00000010381	Smg5	96	77.465	ENSLOCG00000008380	smg5	90	77.541	Lepisosteus_oculatus
ENSMAUG00000010381	Smg5	100	89.489	ENSLAFG00000006241	SMG5	100	89.096	Loxodonta_africana
ENSMAUG00000010381	Smg5	100	91.945	ENSMFAG00000045357	SMG5	100	92.141	Macaca_fascicularis
ENSMAUG00000010381	Smg5	100	91.945	ENSMMUG00000000090	SMG5	100	92.141	Macaca_mulatta
ENSMAUG00000010381	Smg5	100	91.847	ENSMNEG00000044425	SMG5	100	92.043	Macaca_nemestrina
ENSMAUG00000010381	Smg5	100	85.616	ENSMLEG00000041192	SMG5	100	85.616	Mandrillus_leucophaeus
ENSMAUG00000010381	Smg5	99	61.270	ENSMAMG00000010683	smg5	100	61.437	Mastacembelus_armatus
ENSMAUG00000010381	Smg5	99	63.436	ENSMZEG00005015815	smg5	99	64.457	Maylandia_zebra
ENSMAUG00000010381	Smg5	63	58.663	ENSMZEG00005016543	smg5	100	59.276	Maylandia_zebra
ENSMAUG00000010381	Smg5	100	91.847	ENSMICG00000002257	SMG5	100	92.043	Microcebus_murinus
ENSMAUG00000010381	Smg5	100	96.075	ENSMOCG00000016590	Smg5	100	95.878	Microtus_ochrogaster
ENSMAUG00000010381	Smg5	99	58.818	ENSMMOG00000017199	smg5	99	60.270	Mola_mola
ENSMAUG00000010381	Smg5	74	40.642	ENSMODG00000004735	-	86	40.642	Monodelphis_domestica
ENSMAUG00000010381	Smg5	81	38.537	ENSMODG00000004532	-	87	38.049	Monodelphis_domestica
ENSMAUG00000010381	Smg5	79	38.350	ENSMODG00000010675	-	84	38.727	Monodelphis_domestica
ENSMAUG00000010381	Smg5	87	87.064	ENSMODG00000016901	SMG5	98	86.727	Monodelphis_domestica
ENSMAUG00000010381	Smg5	97	35.138	ENSMODG00000004511	-	99	34.863	Monodelphis_domestica
ENSMAUG00000010381	Smg5	99	60.232	ENSMALG00000010375	smg5	99	60.302	Monopterus_albus
ENSMAUG00000010381	Smg5	100	96.264	MGP_CAROLIEiJ_G0025163	Smg5	100	97.765	Mus_caroli
ENSMAUG00000010381	Smg5	100	96.559	ENSMUSG00000001415	Smg5	99	97.765	Mus_musculus
ENSMAUG00000010381	Smg5	100	96.075	MGP_PahariEiJ_G0026606	Smg5	100	97.765	Mus_pahari
ENSMAUG00000010381	Smg5	100	96.362	MGP_SPRETEiJ_G0026104	Smg5	100	97.765	Mus_spretus
ENSMAUG00000010381	Smg5	94	87.802	ENSMPUG00000004546	SMG5	100	88.223	Mustela_putorius_furo
ENSMAUG00000010381	Smg5	100	90.695	ENSMLUG00000008518	SMG5	100	91.283	Myotis_lucifugus
ENSMAUG00000010381	Smg5	100	92.633	ENSNGAG00000020706	Smg5	100	92.731	Nannospalax_galili
ENSMAUG00000010381	Smg5	98	43.844	ENSNGAG00000012101	-	98	43.663	Nannospalax_galili
ENSMAUG00000010381	Smg5	96	63.004	ENSNBRG00000004332	smg5	98	63.911	Neolamprologus_brichardi
ENSMAUG00000010381	Smg5	100	91.356	ENSNLEG00000012439	SMG5	100	91.552	Nomascus_leucogenys
ENSMAUG00000010381	Smg5	100	84.971	ENSMEUG00000012834	SMG5	100	84.676	Notamacropus_eugenii
ENSMAUG00000010381	Smg5	100	90.079	ENSOPRG00000009152	SMG5	100	89.784	Ochotona_princeps
ENSMAUG00000010381	Smg5	100	91.257	ENSODEG00000012237	SMG5	100	91.061	Octodon_degus
ENSMAUG00000010381	Smg5	89	40.984	ENSOCUG00000023338	-	99	40.765	Oryctolagus_cuniculus
ENSMAUG00000010381	Smg5	98	91.348	ENSOCUG00000012886	SMG5	100	91.449	Oryctolagus_cuniculus
ENSMAUG00000010381	Smg5	99	60.342	ENSORLG00000016239	smg5	99	61.241	Oryzias_latipes
ENSMAUG00000010381	Smg5	99	64.000	ENSORLG00020013127	smg5	99	65.162	Oryzias_latipes_hni
ENSMAUG00000010381	Smg5	99	64.105	ENSORLG00015019014	smg5	99	65.949	Oryzias_latipes_hsok
ENSMAUG00000010381	Smg5	82	58.539	ENSOMEG00000021330	smg5	92	59.398	Oryzias_melastigma
ENSMAUG00000010381	Smg5	100	90.177	ENSOGAG00000004966	SMG5	100	90.373	Otolemur_garnettii
ENSMAUG00000010381	Smg5	99	44.195	ENSOARG00000011963	-	99	43.707	Ovis_aries
ENSMAUG00000010381	Smg5	100	90.472	ENSOARG00000005778	SMG5	100	90.766	Ovis_aries
ENSMAUG00000010381	Smg5	100	91.650	ENSPPAG00000011996	SMG5	100	91.847	Pan_paniscus
ENSMAUG00000010381	Smg5	98	88.632	ENSPPRG00000011901	SMG5	100	89.225	Panthera_pardus
ENSMAUG00000010381	Smg5	99	81.033	ENSPTIG00000007892	SMG5	99	81.151	Panthera_tigris_altaica
ENSMAUG00000010381	Smg5	100	91.749	ENSPTRG00000049282	-	100	91.945	Pan_troglodytes
ENSMAUG00000010381	Smg5	100	91.749	ENSPTRG00000023925	SMG5	100	91.945	Pan_troglodytes
ENSMAUG00000010381	Smg5	100	92.043	ENSPANG00000011201	SMG5	100	92.240	Papio_anubis
ENSMAUG00000010381	Smg5	99	65.767	ENSPKIG00000009402	smg5	99	65.598	Paramormyrops_kingsleyae
ENSMAUG00000010381	Smg5	98	78.827	ENSPSIG00000015198	SMG5	100	78.827	Pelodiscus_sinensis
ENSMAUG00000010381	Smg5	99	59.219	ENSPMGG00000010465	smg5	99	59.871	Periophthalmus_magnuspinnatus
ENSMAUG00000010381	Smg5	100	97.345	ENSPEMG00000001819	Smg5	100	97.345	Peromyscus_maniculatus_bairdii
ENSMAUG00000010381	Smg5	99	50.386	ENSPMAG00000000410	smg5	100	50.237	Petromyzon_marinus
ENSMAUG00000010381	Smg5	100	86.555	ENSPCIG00000018938	SMG5	100	86.261	Phascolarctos_cinereus
ENSMAUG00000010381	Smg5	99	65.385	ENSPMEG00000014105	smg5	99	65.896	Poecilia_mexicana
ENSMAUG00000010381	Smg5	93	68.981	ENSPREG00000017713	smg5	99	62.087	Poecilia_reticulata
ENSMAUG00000010381	Smg5	100	91.749	ENSPPYG00000000723	SMG5	100	91.945	Pongo_abelii
ENSMAUG00000010381	Smg5	75	95.028	ENSPCAG00000008412	SMG5	81	95.028	Procavia_capensis
ENSMAUG00000010381	Smg5	100	91.650	ENSPCOG00000004741	SMG5	100	91.847	Propithecus_coquereli
ENSMAUG00000010381	Smg5	100	82.104	ENSPVAG00000016748	SMG5	100	82.318	Pteropus_vampyrus
ENSMAUG00000010381	Smg5	99	58.615	ENSPNYG00000013397	smg5	99	60.635	Pundamilia_nyererei
ENSMAUG00000010381	Smg5	100	96.755	ENSRNOG00000019590	Smg5	100	96.755	Rattus_norvegicus
ENSMAUG00000010381	Smg5	100	91.749	ENSRBIG00000027428	SMG5	100	91.945	Rhinopithecus_bieti
ENSMAUG00000010381	Smg5	100	91.650	ENSRROG00000030035	SMG5	100	91.847	Rhinopithecus_roxellana
ENSMAUG00000010381	Smg5	100	91.159	ENSSBOG00000033339	SMG5	100	91.356	Saimiri_boliviensis_boliviensis
ENSMAUG00000010381	Smg5	99	32.787	ENSSHAG00000009572	-	79	42.356	Sarcophilus_harrisii
ENSMAUG00000010381	Smg5	98	85.900	ENSSHAG00000014163	SMG5	100	85.600	Sarcophilus_harrisii
ENSMAUG00000010381	Smg5	64	40.936	ENSSHAG00000000935	-	92	41.463	Sarcophilus_harrisii
ENSMAUG00000010381	Smg5	85	39.793	ENSSHAG00000000561	-	86	40.157	Sarcophilus_harrisii
ENSMAUG00000010381	Smg5	99	66.310	ENSSFOG00015024175	smg5	99	66.699	Scleropages_formosus
ENSMAUG00000010381	Smg5	99	60.924	ENSSMAG00000013059	smg5	99	60.765	Scophthalmus_maximus
ENSMAUG00000010381	Smg5	99	60.211	ENSSDUG00000007122	smg5	92	76.347	Seriola_dumerili
ENSMAUG00000010381	Smg5	99	60.601	ENSSLDG00000011418	smg5	92	77.069	Seriola_lalandi_dorsalis
ENSMAUG00000010381	Smg5	90	77.693	ENSSARG00000012484	SMG5	100	77.040	Sorex_araneus
ENSMAUG00000010381	Smg5	94	76.210	ENSSPUG00000002260	SMG5	100	75.907	Sphenodon_punctatus
ENSMAUG00000010381	Smg5	91	75.943	ENSSPAG00000014266	smg5	98	65.500	Stegastes_partitus
ENSMAUG00000010381	Smg5	100	91.552	ENSSSCG00000006490	-	100	91.945	Sus_scrofa
ENSMAUG00000010381	Smg5	99	71.063	ENSSSCG00000039308	-	100	71.161	Sus_scrofa
ENSMAUG00000010381	Smg5	99	78.973	ENSTGUG00000003748	-	100	78.850	Taeniopygia_guttata
ENSMAUG00000010381	Smg5	99	64.860	ENSTRUG00000012580	smg5	99	64.666	Takifugu_rubripes
ENSMAUG00000010381	Smg5	99	65.154	ENSTNIG00000010303	smg5	99	64.961	Tetraodon_nigroviridis
ENSMAUG00000010381	Smg5	60	98.522	ENSTBEG00000002777	SMG5	60	98.522	Tupaia_belangeri
ENSMAUG00000010381	Smg5	100	87.033	ENSTTRG00000001401	SMG5	100	86.149	Tursiops_truncatus
ENSMAUG00000010381	Smg5	100	88.212	ENSUAMG00000013721	SMG5	100	88.692	Ursus_americanus
ENSMAUG00000010381	Smg5	98	84.036	ENSUMAG00000018041	SMG5	97	84.438	Ursus_maritimus
ENSMAUG00000010381	Smg5	98	81.168	ENSVPAG00000009446	SMG5	99	81.168	Vicugna_pacos
ENSMAUG00000010381	Smg5	100	89.784	ENSVVUG00000005887	SMG5	100	89.676	Vulpes_vulpes
ENSMAUG00000010381	Smg5	77	64.528	ENSXETG00000033791	SMG5	99	64.277	Xenopus_tropicalis
ENSMAUG00000010381	Smg5	60	75.000	ENSXCOG00000004379	smg5	95	71.429	Xiphophorus_couchianus
ENSMAUG00000010381	Smg5	99	65.728	ENSXMAG00000013499	smg5	99	66.084	Xiphophorus_maculatus