EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000010516 (Gene tree)
Gene ID: 101828910
Gene Symbol: Urb1
Alias: 4921511H13Rik|5730405K23Rik
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 52501 bases
Position: chrKB708169.1:7097832-7150332
Accession: 101828910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000009413	Npa1	PF11707.8	1.7e-67	1	2
ENSMAUP00000009413	Npa1	PF11707.8	1.7e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000013262	-	6177	XM_013116155	ENSMAUP00000009413	2058 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000010516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000010516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000010516	Urb1	99	80.707	ENSG00000142207	URB1	93	80.584	Homo_sapiens
ENSMAUG00000010516	Urb1	99	52.123	ENSAPOG00000020308	urb1	91	52.861	Acanthochromis_polyacanthus
ENSMAUG00000010516	Urb1	99	79.708	ENSAMEG00000011998	URB1	93	79.416	Ailuropoda_melanoleuca
ENSMAUG00000010516	Urb1	95	54.147	ENSACIG00000003248	urb1	89	54.147	Amphilophus_citrinellus
ENSMAUG00000010516	Urb1	99	51.032	ENSAOCG00000010364	urb1	91	51.584	Amphiprion_ocellaris
ENSMAUG00000010516	Urb1	92	52.263	ENSAPEG00000010758	urb1	88	52.853	Amphiprion_percula
ENSMAUG00000010516	Urb1	98	52.859	ENSATEG00000011790	urb1	90	52.859	Anabas_testudineus
ENSMAUG00000010516	Urb1	97	60.526	ENSAPLG00000012791	URB1	92	60.836	Anas_platyrhynchos
ENSMAUG00000010516	Urb1	99	57.349	ENSACAG00000002817	URB1	91	59.165	Anolis_carolinensis
ENSMAUG00000010516	Urb1	99	79.676	ENSANAG00000024617	URB1	92	79.562	Aotus_nancymaae
ENSMAUG00000010516	Urb1	99	52.950	ENSACLG00000024865	urb1	92	53.695	Astatotilapia_calliptera
ENSMAUG00000010516	Urb1	99	46.715	ENSAMXG00000012306	urb1	91	48.030	Astyanax_mexicanus
ENSMAUG00000010516	Urb1	99	77.664	ENSBTAG00000012412	URB1	94	77.664	Bos_taurus
ENSMAUG00000010516	Urb1	99	78.645	ENSCJAG00000009118	URB1	92	78.540	Callithrix_jacchus
ENSMAUG00000010516	Urb1	99	80.000	ENSCAFG00000008892	URB1	94	79.708	Canis_familiaris
ENSMAUG00000010516	Urb1	99	79.124	ENSCAFG00020025987	-	94	78.832	Canis_lupus_dingo
ENSMAUG00000010516	Urb1	99	80.000	ENSCAFG00020025994	-	95	79.708	Canis_lupus_dingo
ENSMAUG00000010516	Urb1	99	78.102	ENSCHIG00000015645	URB1	94	78.102	Capra_hircus
ENSMAUG00000010516	Urb1	99	79.124	ENSTSYG00000013286	URB1	94	79.124	Carlito_syrichta
ENSMAUG00000010516	Urb1	98	74.097	ENSCAPG00000015589	URB1	93	74.097	Cavia_aperea
ENSMAUG00000010516	Urb1	99	79.854	ENSCPOG00000006748	URB1	94	79.854	Cavia_porcellus
ENSMAUG00000010516	Urb1	99	79.087	ENSCCAG00000021299	URB1	92	78.978	Cebus_capucinus
ENSMAUG00000010516	Urb1	99	79.971	ENSCATG00000042630	URB1	92	80.000	Cercocebus_atys
ENSMAUG00000010516	Urb1	100	77.874	ENSCLAG00000005262	URB1	94	77.730	Chinchilla_lanigera
ENSMAUG00000010516	Urb1	99	78.374	ENSCSAG00000009584	URB1	93	78.417	Chlorocebus_sabaeus
ENSMAUG00000010516	Urb1	99	61.650	ENSCPBG00000006454	URB1	92	61.505	Chrysemys_picta_bellii
ENSMAUG00000010516	Urb1	99	79.823	ENSCANG00000031088	URB1	92	79.854	Colobus_angolensis_palliatus
ENSMAUG00000010516	Urb1	99	89.810	ENSCGRG00001010616	Urb1	93	89.810	Cricetulus_griseus_chok1gshd
ENSMAUG00000010516	Urb1	98	88.897	ENSCGRG00000015840	Urb1	93	88.897	Cricetulus_griseus_crigri
ENSMAUG00000010516	Urb1	99	49.556	ENSCSEG00000012616	urb1	92	50.000	Cynoglossus_semilaevis
ENSMAUG00000010516	Urb1	92	52.219	ENSCVAG00000009076	urb1	88	52.799	Cyprinodon_variegatus
ENSMAUG00000010516	Urb1	99	51.101	ENSDARG00000060308	urb1	92	51.542	Danio_rerio
ENSMAUG00000010516	Urb1	84	75.182	ENSDNOG00000015586	URB1	93	75.036	Dasypus_novemcinctus
ENSMAUG00000010516	Urb1	99	78.394	ENSDORG00000006735	Urb1	93	78.394	Dipodomys_ordii
ENSMAUG00000010516	Urb1	91	88.136	ENSETEG00000009080	URB1	89	88.136	Echinops_telfairi
ENSMAUG00000010516	Urb1	99	78.045	ENSEASG00005007711	URB1	95	77.895	Equus_asinus_asinus
ENSMAUG00000010516	Urb1	99	78.394	ENSECAG00000013206	URB1	94	78.248	Equus_caballus
ENSMAUG00000010516	Urb1	59	83.817	ENSEEUG00000003626	-	55	83.817	Erinaceus_europaeus
ENSMAUG00000010516	Urb1	99	51.379	ENSELUG00000020516	urb1	92	55.309	Esox_lucius
ENSMAUG00000010516	Urb1	99	77.810	ENSFCAG00000002177	URB1	94	77.810	Felis_catus
ENSMAUG00000010516	Urb1	97	61.146	ENSFALG00000004636	URB1	98	61.146	Ficedula_albicollis
ENSMAUG00000010516	Urb1	99	79.854	ENSFDAG00000007288	URB1	89	79.854	Fukomys_damarensis
ENSMAUG00000010516	Urb1	99	45.388	ENSFHEG00000000202	urb1	91	53.351	Fundulus_heteroclitus
ENSMAUG00000010516	Urb1	92	48.363	ENSGMOG00000001838	urb1	87	48.363	Gadus_morhua
ENSMAUG00000010516	Urb1	99	61.103	ENSGALG00000015887	URB1	92	61.721	Gallus_gallus
ENSMAUG00000010516	Urb1	99	52.219	ENSGAFG00000020694	urb1	91	52.799	Gambusia_affinis
ENSMAUG00000010516	Urb1	99	51.208	ENSGACG00000011703	urb1	92	51.208	Gasterosteus_aculeatus
ENSMAUG00000010516	Urb1	99	61.071	ENSGAGG00000022544	URB1	92	60.926	Gopherus_agassizii
ENSMAUG00000010516	Urb1	99	80.854	ENSGGOG00000000285	URB1	94	80.876	Gorilla_gorilla
ENSMAUG00000010516	Urb1	99	52.950	ENSHBUG00000001904	urb1	92	53.695	Haplochromis_burtoni
ENSMAUG00000010516	Urb1	100	75.279	ENSHGLG00000004907	URB1	93	75.793	Heterocephalus_glaber_female
ENSMAUG00000010516	Urb1	100	78.978	ENSHGLG00100010749	URB1	93	79.336	Heterocephalus_glaber_male
ENSMAUG00000010516	Urb1	68	45.968	ENSHCOG00000018683	urb1	83	46.573	Hippocampus_comes
ENSMAUG00000010516	Urb1	99	47.605	ENSIPUG00000014721	urb1	92	46.834	Ictalurus_punctatus
ENSMAUG00000010516	Urb1	99	80.547	ENSSTOG00000004539	URB1	94	80.146	Ictidomys_tridecemlineatus
ENSMAUG00000010516	Urb1	99	49.120	ENSKMAG00000006001	urb1	91	52.553	Kryptolebias_marmoratus
ENSMAUG00000010516	Urb1	90	50.222	ENSLBEG00000027208	urb1	87	50.755	Labrus_bergylta
ENSMAUG00000010516	Urb1	99	53.955	ENSLACG00000017059	URB1	93	55.344	Latimeria_chalumnae
ENSMAUG00000010516	Urb1	99	54.161	ENSLOCG00000009190	urb1	90	55.204	Lepisosteus_oculatus
ENSMAUG00000010516	Urb1	100	76.087	ENSLAFG00000010407	URB1	94	76.087	Loxodonta_africana
ENSMAUG00000010516	Urb1	99	79.823	ENSMFAG00000034391	URB1	89	79.854	Macaca_fascicularis
ENSMAUG00000010516	Urb1	99	79.529	ENSMMUG00000010295	URB1	92	79.562	Macaca_mulatta
ENSMAUG00000010516	Urb1	99	75.294	ENSMNEG00000032981	URB1	92	75.364	Macaca_nemestrina
ENSMAUG00000010516	Urb1	99	79.971	ENSMLEG00000041435	URB1	92	80.000	Mandrillus_leucophaeus
ENSMAUG00000010516	Urb1	95	52.047	ENSMAMG00000011238	urb1	87	52.924	Mastacembelus_armatus
ENSMAUG00000010516	Urb1	99	50.000	ENSMZEG00005011862	urb1	92	50.711	Maylandia_zebra
ENSMAUG00000010516	Urb1	98	62.346	ENSMGAG00000014512	URB1	92	62.654	Meleagris_gallopavo
ENSMAUG00000010516	Urb1	99	79.912	ENSMICG00000016424	URB1	94	80.059	Microcebus_murinus
ENSMAUG00000010516	Urb1	99	84.751	ENSMOCG00000012613	Urb1	92	84.311	Microtus_ochrogaster
ENSMAUG00000010516	Urb1	99	65.793	ENSMODG00000021076	URB1	93	65.066	Monodelphis_domestica
ENSMAUG00000010516	Urb1	96	51.917	ENSMALG00000017411	urb1	84	52.719	Monopterus_albus
ENSMAUG00000010516	Urb1	100	83.504	MGP_CAROLIEiJ_G0020948	Urb1	93	83.358	Mus_caroli
ENSMAUG00000010516	Urb1	100	83.650	ENSMUSG00000039929	Urb1	93	83.504	Mus_musculus
ENSMAUG00000010516	Urb1	100	82.471	MGP_PahariEiJ_G0016653	Urb1	93	82.920	Mus_pahari
ENSMAUG00000010516	Urb1	100	82.920	MGP_SPRETEiJ_G0021854	Urb1	93	82.774	Mus_spretus
ENSMAUG00000010516	Urb1	100	76.878	ENSMPUG00000001123	URB1	94	76.642	Mustela_putorius_furo
ENSMAUG00000010516	Urb1	99	78.832	ENSNGAG00000001905	Urb1	93	79.638	Nannospalax_galili
ENSMAUG00000010516	Urb1	79	52.959	ENSNBRG00000001049	urb1	89	53.707	Neolamprologus_brichardi
ENSMAUG00000010516	Urb1	99	79.823	ENSNLEG00000026872	URB1	92	79.854	Nomascus_leucogenys
ENSMAUG00000010516	Urb1	92	70.833	ENSMEUG00000010828	URB1	89	55.117	Notamacropus_eugenii
ENSMAUG00000010516	Urb1	99	73.167	ENSOPRG00000013482	URB1	93	73.021	Ochotona_princeps
ENSMAUG00000010516	Urb1	100	78.248	ENSODEG00000002587	URB1	93	79.186	Octodon_degus
ENSMAUG00000010516	Urb1	99	53.097	ENSONIG00000005599	urb1	92	53.846	Oreochromis_niloticus
ENSMAUG00000010516	Urb1	99	77.664	ENSOCUG00000009381	URB1	92	77.080	Oryctolagus_cuniculus
ENSMAUG00000010516	Urb1	99	51.029	ENSORLG00000003429	urb1	92	51.355	Oryzias_latipes
ENSMAUG00000010516	Urb1	99	51.105	ENSORLG00020013785	urb1	92	51.205	Oryzias_latipes_hni
ENSMAUG00000010516	Urb1	99	48.601	ENSORLG00015019421	urb1	92	48.645	Oryzias_latipes_hsok
ENSMAUG00000010516	Urb1	73	48.012	ENSOMEG00000002094	urb1	86	48.012	Oryzias_melastigma
ENSMAUG00000010516	Urb1	99	79.472	ENSOGAG00000017140	URB1	94	79.326	Otolemur_garnettii
ENSMAUG00000010516	Urb1	96	77.713	ENSOARG00000013679	URB1	93	78.739	Ovis_aries
ENSMAUG00000010516	Urb1	99	80.854	ENSPPAG00000003423	URB1	94	80.876	Pan_paniscus
ENSMAUG00000010516	Urb1	99	77.518	ENSPPRG00000023131	URB1	94	77.372	Panthera_pardus
ENSMAUG00000010516	Urb1	90	71.001	ENSPTIG00000016125	URB1	91	71.386	Panthera_tigris_altaica
ENSMAUG00000010516	Urb1	99	80.707	ENSPTRG00000013852	URB1	94	80.730	Pan_troglodytes
ENSMAUG00000010516	Urb1	99	79.971	ENSPANG00000021964	URB1	92	80.000	Papio_anubis
ENSMAUG00000010516	Urb1	99	54.925	ENSPKIG00000003683	urb1	91	54.925	Paramormyrops_kingsleyae
ENSMAUG00000010516	Urb1	99	85.644	ENSPEMG00000021205	Urb1	92	85.644	Peromyscus_maniculatus_bairdii
ENSMAUG00000010516	Urb1	79	42.776	ENSPMAG00000009733	URB1	90	43.156	Petromyzon_marinus
ENSMAUG00000010516	Urb1	99	65.211	ENSPCIG00000016350	URB1	94	64.629	Phascolarctos_cinereus
ENSMAUG00000010516	Urb1	96	52.932	ENSPLAG00000004371	urb1	92	52.932	Poecilia_latipinna
ENSMAUG00000010516	Urb1	99	52.346	ENSPMEG00000006634	urb1	92	52.924	Poecilia_mexicana
ENSMAUG00000010516	Urb1	98	51.830	ENSPREG00000013453	urb1	91	52.545	Poecilia_reticulata
ENSMAUG00000010516	Urb1	99	80.412	ENSPPYG00000011359	URB1	92	80.146	Pongo_abelii
ENSMAUG00000010516	Urb1	99	70.425	ENSPCAG00000007430	URB1	94	69.420	Procavia_capensis
ENSMAUG00000010516	Urb1	99	79.765	ENSPCOG00000022695	URB1	94	79.765	Propithecus_coquereli
ENSMAUG00000010516	Urb1	99	77.226	ENSPVAG00000000889	URB1	93	76.934	Pteropus_vampyrus
ENSMAUG00000010516	Urb1	99	51.551	ENSPNYG00000010589	urb1	91	52.266	Pundamilia_nyererei
ENSMAUG00000010516	Urb1	99	47.662	ENSPNAG00000019324	urb1	91	47.662	Pygocentrus_nattereri
ENSMAUG00000010516	Urb1	100	84.088	ENSRNOG00000002080	Urb1	93	83.796	Rattus_norvegicus
ENSMAUG00000010516	Urb1	99	80.118	ENSRBIG00000033122	URB1	92	80.146	Rhinopithecus_bieti
ENSMAUG00000010516	Urb1	99	80.118	ENSRROG00000040237	URB1	92	80.146	Rhinopithecus_roxellana
ENSMAUG00000010516	Urb1	99	79.381	ENSSBOG00000027672	URB1	92	79.416	Saimiri_boliviensis_boliviensis
ENSMAUG00000010516	Urb1	99	65.793	ENSSHAG00000005140	URB1	93	65.211	Sarcophilus_harrisii
ENSMAUG00000010516	Urb1	92	53.130	ENSSFOG00015000339	urb1	90	54.299	Scleropages_formosus
ENSMAUG00000010516	Urb1	99	51.537	ENSSMAG00000003782	urb1	92	51.868	Scophthalmus_maximus
ENSMAUG00000010516	Urb1	99	51.890	ENSSDUG00000012313	urb1	93	51.890	Seriola_dumerili
ENSMAUG00000010516	Urb1	99	51.965	ENSSLDG00000023179	urb1	93	51.965	Seriola_lalandi_dorsalis
ENSMAUG00000010516	Urb1	99	60.000	ENSSPUG00000012447	URB1	91	60.954	Sphenodon_punctatus
ENSMAUG00000010516	Urb1	99	51.684	ENSSPAG00000006325	urb1	92	52.108	Stegastes_partitus
ENSMAUG00000010516	Urb1	99	77.843	ENSSSCG00000032024	URB1	94	77.405	Sus_scrofa
ENSMAUG00000010516	Urb1	71	60.708	ENSTGUG00000013442	URB1	90	60.708	Taeniopygia_guttata
ENSMAUG00000010516	Urb1	99	51.458	ENSTRUG00000009372	urb1	92	52.012	Takifugu_rubripes
ENSMAUG00000010516	Urb1	99	51.574	ENSTNIG00000016277	urb1	92	51.574	Tetraodon_nigroviridis
ENSMAUG00000010516	Urb1	74	81.633	ENSTBEG00000010044	URB1	67	81.633	Tupaia_belangeri
ENSMAUG00000010516	Urb1	90	77.080	ENSTTRG00000007712	URB1	86	77.080	Tursiops_truncatus
ENSMAUG00000010516	Urb1	99	80.000	ENSUAMG00000012231	URB1	93	79.708	Ursus_americanus
ENSMAUG00000010516	Urb1	90	79.225	ENSUMAG00000017419	URB1	91	80.408	Ursus_maritimus
ENSMAUG00000010516	Urb1	65	85.577	ENSVPAG00000001164	URB1	60	85.577	Vicugna_pacos
ENSMAUG00000010516	Urb1	99	79.185	ENSVVUG00000000551	URB1	94	78.894	Vulpes_vulpes
ENSMAUG00000010516	Urb1	99	55.908	ENSXETG00000009895	urb1	92	55.908	Xenopus_tropicalis
ENSMAUG00000010516	Urb1	99	51.627	ENSXCOG00000005500	urb1	91	52.194	Xiphophorus_couchianus
ENSMAUG00000010516	Urb1	99	51.183	ENSXMAG00000007253	urb1	91	51.740	Xiphophorus_maculatus