EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000010952 (Gene tree)
Gene ID: 106022236
Gene Symbol: -
Alias: -
Full Name: ribosomal protein L39
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 1204 bases
Position: chrKB708271.1:2481873-2483076
Accession: 106022236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000009918	Ribosomal_L39	PF00832.20	5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000013779	-	235	XM_013122799	ENSMAUP00000009918	35 (aa)	XP_012978253	UPI0000E36A94

Gene Model

Click here to download ENSMAUG00000010952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000010952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000010952	-	100	82.857	ENSMAUG00000005289	-	69	82.857
ENSMAUG00000010952	-	100	100.000	ENSMAUG00000009590	-	69	100.000
ENSMAUG00000010952	-	100	94.286	ENSMAUG00000015776	Rpl39l	69	94.286
ENSMAUG00000010952	-	100	94.286	ENSMAUG00000005925	-	69	94.286
ENSMAUG00000010952	-	100	97.143	ENSMAUG00000002274	-	69	97.143
ENSMAUG00000010952	-	100	88.571	ENSMAUG00000017764	-	69	88.571
ENSMAUG00000010952	-	100	88.571	ENSMAUG00000002516	-	69	88.571
ENSMAUG00000010952	-	91	100.000	ENSMAUG00000008123	-	64	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000010952	-	100	97.143	ENSANAG00000032459	-	67	97.143	Aotus_nancymaae
ENSMAUG00000010952	-	100	80.000	ENSANAG00000033598	-	80	80.000	Aotus_nancymaae
ENSMAUG00000010952	-	80	96.429	ENSCSEG00000007995	-	74	96.429	Cynoglossus_semilaevis
ENSMAUG00000010952	-	100	77.143	ENSFCAG00000044060	-	73	77.143	Felis_catus
ENSMAUG00000010952	-	100	88.571	ENSPPRG00000016675	-	63	88.571	Panthera_pardus
ENSMAUG00000010952	-	100	88.571	ENSPTIG00000006415	-	63	88.571	Panthera_tigris_altaica
ENSMAUG00000010952	-	100	100.000	ENSPNYG00000009831	-	100	100.000	Pundamilia_nyererei
ENSMAUG00000010952	-	71	96.000	ENSSLDG00000009401	-	64	96.000	Seriola_lalandi_dorsalis
ENSMAUG00000010952	-	100	71.429	ENSSARG00000001310	-	68	71.429	Sorex_araneus
ENSMAUG00000010952	-	100	97.143	ENSSPUG00000013103	-	69	97.143	Sphenodon_punctatus
ENSMAUG00000010952	-	100	88.571	ENSSSCG00000030728	-	83	88.571	Sus_scrofa
ENSMAUG00000010952	-	100	80.000	ENSUAMG00000021041	-	71	80.000	Ursus_americanus
ENSMAUG00000010952	-	100	80.000	ENSUMAG00000022604	-	71	80.000	Ursus_maritimus
ENSMAUG00000010952	-	97	100.000	ENSVPAG00000009970	-	100	100.000	Vicugna_pacos