EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000011101 (Gene tree)
Gene ID: 101822966
Gene Symbol: Trub1
Alias: 2610009I02Rik|9030425C13Rik
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 36785 bases
Position: chrKB708127.1:1103386-1140170
Accession: 101822966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000010124	TruB_N	PF01509.18	2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000013992	-	1002	XM_013116602	ENSMAUP00000010124	333 (aa)	XP_012972056	-

Gene Model

Click here to download ENSMAUG00000011101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000011101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000011101	Trub1	57	34.483	ENSMAUG00000010403	Trub2	60	34.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000011101	Trub1	99	78.223	ENSG00000165832	TRUB1	85	84.899	Homo_sapiens
ENSMAUG00000011101	Trub1	72	66.122	ENSAPOG00000020565	trub1	89	65.984	Acanthochromis_polyacanthus
ENSMAUG00000011101	Trub1	89	83.775	ENSAMEG00000014931	TRUB1	85	83.667	Ailuropoda_melanoleuca
ENSMAUG00000011101	Trub1	72	59.756	ENSACIG00000003060	trub1	80	60.669	Amphilophus_citrinellus
ENSMAUG00000011101	Trub1	72	66.122	ENSAOCG00000017188	trub1	87	66.946	Amphiprion_ocellaris
ENSMAUG00000011101	Trub1	72	65.447	ENSAPEG00000015209	trub1	87	66.527	Amphiprion_percula
ENSMAUG00000011101	Trub1	71	66.116	ENSATEG00000023291	trub1	84	65.957	Anabas_testudineus
ENSMAUG00000011101	Trub1	81	71.636	ENSAPLG00000006808	TRUB1	95	71.970	Anas_platyrhynchos
ENSMAUG00000011101	Trub1	80	67.897	ENSACAG00000009282	TRUB1	94	67.816	Anolis_carolinensis
ENSMAUG00000011101	Trub1	88	85.953	ENSANAG00000022870	TRUB1	85	85.859	Aotus_nancymaae
ENSMAUG00000011101	Trub1	76	62.548	ENSACLG00000000823	trub1	91	63.492	Astatotilapia_calliptera
ENSMAUG00000011101	Trub1	80	62.362	ENSAMXG00000015845	trub1	85	63.922	Astyanax_mexicanus
ENSMAUG00000011101	Trub1	89	84.385	ENSBTAG00000012955	TRUB1	85	84.281	Bos_taurus
ENSMAUG00000011101	Trub1	89	86.000	ENSCJAG00000047815	TRUB1	85	85.906	Callithrix_jacchus
ENSMAUG00000011101	Trub1	88	85.284	ENSCAFG00000011688	TRUB1	80	85.714	Canis_familiaris
ENSMAUG00000011101	Trub1	89	85.333	ENSCAFG00020013237	TRUB1	80	85.714	Canis_lupus_dingo
ENSMAUG00000011101	Trub1	89	84.385	ENSCHIG00000020884	TRUB1	90	84.281	Capra_hircus
ENSMAUG00000011101	Trub1	89	85.333	ENSTSYG00000000446	TRUB1	85	85.235	Carlito_syrichta
ENSMAUG00000011101	Trub1	74	74.308	ENSCAPG00000017088	TRUB1	99	74.308	Cavia_aperea
ENSMAUG00000011101	Trub1	57	84.615	ENSCPOG00000040236	-	72	86.932	Cavia_porcellus
ENSMAUG00000011101	Trub1	57	85.641	ENSCPOG00000030129	-	70	86.592	Cavia_porcellus
ENSMAUG00000011101	Trub1	89	85.667	ENSCCAG00000028842	TRUB1	85	85.570	Cebus_capucinus
ENSMAUG00000011101	Trub1	88	85.619	ENSCATG00000033431	TRUB1	85	85.570	Cercocebus_atys
ENSMAUG00000011101	Trub1	57	86.224	ENSCLAG00000008664	TRUB1	72	86.932	Chinchilla_lanigera
ENSMAUG00000011101	Trub1	88	85.619	ENSCSAG00000004891	TRUB1	85	85.570	Chlorocebus_sabaeus
ENSMAUG00000011101	Trub1	89	71.000	ENSCHOG00000011931	TRUB1	85	70.903	Choloepus_hoffmanni
ENSMAUG00000011101	Trub1	80	73.529	ENSCPBG00000003051	TRUB1	91	72.727	Chrysemys_picta_bellii
ENSMAUG00000011101	Trub1	88	85.619	ENSCANG00000029445	TRUB1	85	85.570	Colobus_angolensis_palliatus
ENSMAUG00000011101	Trub1	75	94.902	ENSCGRG00001016772	-	85	94.553	Cricetulus_griseus_chok1gshd
ENSMAUG00000011101	Trub1	97	80.435	ENSCGRG00001010322	-	76	88.043	Cricetulus_griseus_chok1gshd
ENSMAUG00000011101	Trub1	100	84.320	ENSCGRG00000010806	Trub1	91	94.966	Cricetulus_griseus_crigri
ENSMAUG00000011101	Trub1	75	60.156	ENSCSEG00000011261	trub1	92	56.690	Cynoglossus_semilaevis
ENSMAUG00000011101	Trub1	75	63.281	ENSCVAG00000008791	trub1	76	63.052	Cyprinodon_variegatus
ENSMAUG00000011101	Trub1	77	64.885	ENSDARG00000053805	trub1	87	65.098	Danio_rerio
ENSMAUG00000011101	Trub1	89	80.000	ENSDNOG00000001069	TRUB1	80	81.139	Dasypus_novemcinctus
ENSMAUG00000011101	Trub1	96	82.769	ENSDORG00000010431	Trub1	86	85.619	Dipodomys_ordii
ENSMAUG00000011101	Trub1	67	87.234	ENSETEG00000009183	TRUB1	60	89.922	Echinops_telfairi
ENSMAUG00000011101	Trub1	89	85.000	ENSEASG00005014739	TRUB1	85	84.950	Equus_asinus_asinus
ENSMAUG00000011101	Trub1	89	85.000	ENSECAG00000007177	TRUB1	85	84.950	Equus_caballus
ENSMAUG00000011101	Trub1	87	72.789	ENSEEUG00000013993	TRUB1	78	71.886	Erinaceus_europaeus
ENSMAUG00000011101	Trub1	72	66.531	ENSELUG00000000502	trub1	83	67.227	Esox_lucius
ENSMAUG00000011101	Trub1	88	85.619	ENSFCAG00000031927	TRUB1	80	86.022	Felis_catus
ENSMAUG00000011101	Trub1	70	73.950	ENSFALG00000002232	TRUB1	91	73.950	Ficedula_albicollis
ENSMAUG00000011101	Trub1	57	87.245	ENSFDAG00000008140	TRUB1	72	88.068	Fukomys_damarensis
ENSMAUG00000011101	Trub1	80	59.410	ENSFHEG00000004016	trub1	90	59.470	Fundulus_heteroclitus
ENSMAUG00000011101	Trub1	80	72.059	ENSGALG00000009091	TRUB1	95	70.531	Gallus_gallus
ENSMAUG00000011101	Trub1	77	58.712	ENSGAFG00000009193	trub1	83	61.603	Gambusia_affinis
ENSMAUG00000011101	Trub1	58	63.819	ENSGACG00000015387	trub1	98	63.819	Gasterosteus_aculeatus
ENSMAUG00000011101	Trub1	88	68.456	ENSGAGG00000009758	TRUB1	75	73.485	Gopherus_agassizii
ENSMAUG00000011101	Trub1	89	85.000	ENSGGOG00000004583	TRUB1	85	84.899	Gorilla_gorilla
ENSMAUG00000011101	Trub1	76	62.548	ENSHBUG00000016787	trub1	91	63.492	Haplochromis_burtoni
ENSMAUG00000011101	Trub1	100	75.645	ENSHGLG00000015314	TRUB1	81	81.495	Heterocephalus_glaber_female
ENSMAUG00000011101	Trub1	57	85.641	ENSHGLG00100009183	TRUB1	74	86.364	Heterocephalus_glaber_male
ENSMAUG00000011101	Trub1	78	61.887	ENSHCOG00000017877	trub1	89	62.016	Hippocampus_comes
ENSMAUG00000011101	Trub1	81	62.545	ENSIPUG00000017559	trub1	91	63.707	Ictalurus_punctatus
ENSMAUG00000011101	Trub1	89	83.056	ENSSTOG00000003641	TRUB1	89	83.221	Ictidomys_tridecemlineatus
ENSMAUG00000011101	Trub1	100	78.529	ENSJJAG00000011800	Trub1	88	83.893	Jaculus_jaculus
ENSMAUG00000011101	Trub1	72	63.821	ENSKMAG00000006232	trub1	86	64.435	Kryptolebias_marmoratus
ENSMAUG00000011101	Trub1	76	61.887	ENSLBEG00000026722	trub1	90	62.403	Labrus_bergylta
ENSMAUG00000011101	Trub1	81	69.708	ENSLACG00000014885	TRUB1	86	70.930	Latimeria_chalumnae
ENSMAUG00000011101	Trub1	80	67.399	ENSLOCG00000012979	trub1	86	68.504	Lepisosteus_oculatus
ENSMAUG00000011101	Trub1	86	78.667	ENSLAFG00000015452	TRUB1	82	80.488	Loxodonta_africana
ENSMAUG00000011101	Trub1	88	85.284	ENSMFAG00000031767	TRUB1	85	85.235	Macaca_fascicularis
ENSMAUG00000011101	Trub1	88	85.619	ENSMMUG00000001902	TRUB1	85	85.570	Macaca_mulatta
ENSMAUG00000011101	Trub1	88	80.602	ENSMNEG00000044646	TRUB1	85	80.537	Macaca_nemestrina
ENSMAUG00000011101	Trub1	89	85.667	ENSMLEG00000042655	TRUB1	85	85.570	Mandrillus_leucophaeus
ENSMAUG00000011101	Trub1	76	62.548	ENSMZEG00005024095	trub1	91	63.492	Maylandia_zebra
ENSMAUG00000011101	Trub1	81	71.168	ENSMGAG00000011135	TRUB1	91	71.053	Meleagris_gallopavo
ENSMAUG00000011101	Trub1	89	85.050	ENSMICG00000016324	TRUB1	86	84.950	Microcebus_murinus
ENSMAUG00000011101	Trub1	100	86.686	ENSMOCG00000017759	Trub1	90	91.639	Microtus_ochrogaster
ENSMAUG00000011101	Trub1	80	80.741	ENSMODG00000009676	TRUB1	73	80.303	Monodelphis_domestica
ENSMAUG00000011101	Trub1	100	81.953	MGP_CAROLIEiJ_G0023100	Trub1	100	81.953	Mus_caroli
ENSMAUG00000011101	Trub1	100	81.361	ENSMUSG00000025086	Trub1	100	81.361	Mus_musculus
ENSMAUG00000011101	Trub1	100	82.249	MGP_PahariEiJ_G0014588	Trub1	100	82.249	Mus_pahari
ENSMAUG00000011101	Trub1	100	81.657	MGP_SPRETEiJ_G0024021	Trub1	100	81.657	Mus_spretus
ENSMAUG00000011101	Trub1	89	86.000	ENSMPUG00000003556	TRUB1	85	85.906	Mustela_putorius_furo
ENSMAUG00000011101	Trub1	88	83.946	ENSMLUG00000017686	TRUB1	82	84.286	Myotis_lucifugus
ENSMAUG00000011101	Trub1	100	80.747	ENSNGAG00000018682	Trub1	86	86.622	Nannospalax_galili
ENSMAUG00000011101	Trub1	72	65.041	ENSNBRG00000023393	trub1	85	66.109	Neolamprologus_brichardi
ENSMAUG00000011101	Trub1	88	84.615	ENSNLEG00000016345	TRUB1	85	84.564	Nomascus_leucogenys
ENSMAUG00000011101	Trub1	59	84.080	ENSMEUG00000006603	TRUB1	72	83.590	Notamacropus_eugenii
ENSMAUG00000011101	Trub1	89	80.066	ENSOPRG00000009371	TRUB1	82	80.783	Ochotona_princeps
ENSMAUG00000011101	Trub1	100	72.779	ENSODEG00000010854	TRUB1	81	81.139	Octodon_degus
ENSMAUG00000011101	Trub1	72	64.634	ENSONIG00000007249	trub1	87	65.690	Oreochromis_niloticus
ENSMAUG00000011101	Trub1	81	74.818	ENSOANG00000001556	TRUB1	87	74.621	Ornithorhynchus_anatinus
ENSMAUG00000011101	Trub1	89	79.402	ENSOCUG00000009456	TRUB1	81	79.715	Oryctolagus_cuniculus
ENSMAUG00000011101	Trub1	71	65.702	ENSORLG00000029719	trub1	84	65.957	Oryzias_latipes
ENSMAUG00000011101	Trub1	71	66.116	ENSORLG00020016767	trub1	83	66.383	Oryzias_latipes_hni
ENSMAUG00000011101	Trub1	71	65.702	ENSORLG00015014728	trub1	84	66.383	Oryzias_latipes_hsok
ENSMAUG00000011101	Trub1	77	63.359	ENSOMEG00000014556	trub1	83	65.678	Oryzias_melastigma
ENSMAUG00000011101	Trub1	89	86.047	ENSOGAG00000015895	TRUB1	85	85.953	Otolemur_garnettii
ENSMAUG00000011101	Trub1	87	82.178	ENSOARG00000015591	TRUB1	87	82.026	Ovis_aries
ENSMAUG00000011101	Trub1	99	78.223	ENSPPAG00000043645	TRUB1	85	84.899	Pan_paniscus
ENSMAUG00000011101	Trub1	88	85.284	ENSPPRG00000007096	TRUB1	80	85.663	Panthera_pardus
ENSMAUG00000011101	Trub1	88	85.619	ENSPTIG00000006378	TRUB1	80	86.022	Panthera_tigris_altaica
ENSMAUG00000011101	Trub1	99	78.223	ENSPTRG00000002964	TRUB1	85	84.899	Pan_troglodytes
ENSMAUG00000011101	Trub1	88	85.619	ENSPANG00000020712	TRUB1	85	85.570	Papio_anubis
ENSMAUG00000011101	Trub1	83	68.905	ENSPSIG00000012877	TRUB1	91	70.455	Pelodiscus_sinensis
ENSMAUG00000011101	Trub1	72	64.082	ENSPMGG00000000075	trub1	86	65.126	Periophthalmus_magnuspinnatus
ENSMAUG00000011101	Trub1	100	85.588	ENSPEMG00000011156	Trub1	100	86.176	Peromyscus_maniculatus_bairdii
ENSMAUG00000011101	Trub1	84	77.817	ENSPCIG00000009729	TRUB1	75	77.338	Phascolarctos_cinereus
ENSMAUG00000011101	Trub1	72	62.857	ENSPFOG00000009950	trub1	87	63.025	Poecilia_formosa
ENSMAUG00000011101	Trub1	72	62.857	ENSPLAG00000013855	trub1	84	63.025	Poecilia_latipinna
ENSMAUG00000011101	Trub1	77	60.456	ENSPMEG00000009064	trub1	91	60.547	Poecilia_mexicana
ENSMAUG00000011101	Trub1	72	63.673	ENSPREG00000003343	trub1	86	63.866	Poecilia_reticulata
ENSMAUG00000011101	Trub1	89	84.667	ENSPPYG00000002676	TRUB1	85	84.564	Pongo_abelii
ENSMAUG00000011101	Trub1	89	74.000	ENSPCAG00000008427	TRUB1	79	75.000	Procavia_capensis
ENSMAUG00000011101	Trub1	89	79.070	ENSPCOG00000024360	TRUB1	85	78.930	Propithecus_coquereli
ENSMAUG00000011101	Trub1	62	88.679	ENSPVAG00000007575	TRUB1	74	89.744	Pteropus_vampyrus
ENSMAUG00000011101	Trub1	76	62.548	ENSPNYG00000018614	trub1	91	63.492	Pundamilia_nyererei
ENSMAUG00000011101	Trub1	80	55.882	ENSPNAG00000006881	trub1	82	56.693	Pygocentrus_nattereri
ENSMAUG00000011101	Trub1	100	82.405	ENSRNOG00000017321	Trub1	88	86.957	Rattus_norvegicus
ENSMAUG00000011101	Trub1	89	76.610	ENSRBIG00000033423	TRUB1	84	76.451	Rhinopithecus_bieti
ENSMAUG00000011101	Trub1	89	85.667	ENSRROG00000033902	TRUB1	85	85.570	Rhinopithecus_roxellana
ENSMAUG00000011101	Trub1	89	86.000	ENSSBOG00000024237	TRUB1	85	85.906	Saimiri_boliviensis_boliviensis
ENSMAUG00000011101	Trub1	75	75.391	ENSSHAG00000009346	TRUB1	86	75.391	Sarcophilus_harrisii
ENSMAUG00000011101	Trub1	71	67.078	ENSSFOG00015022124	trub1	85	64.940	Scleropages_formosus
ENSMAUG00000011101	Trub1	72	65.041	ENSSMAG00000001020	trub1	85	65.690	Scophthalmus_maximus
ENSMAUG00000011101	Trub1	71	65.833	ENSSDUG00000016414	trub1	86	66.109	Seriola_dumerili
ENSMAUG00000011101	Trub1	71	66.250	ENSSLDG00000015486	trub1	86	66.527	Seriola_lalandi_dorsalis
ENSMAUG00000011101	Trub1	83	73.571	ENSSPUG00000001642	TRUB1	91	74.621	Sphenodon_punctatus
ENSMAUG00000011101	Trub1	72	66.260	ENSSPAG00000001217	trub1	86	66.946	Stegastes_partitus
ENSMAUG00000011101	Trub1	89	82.392	ENSSSCG00000010653	TRUB1	85	82.274	Sus_scrofa
ENSMAUG00000011101	Trub1	80	73.704	ENSTGUG00000010971	TRUB1	94	73.485	Taeniopygia_guttata
ENSMAUG00000011101	Trub1	74	71.032	ENSTBEG00000002880	TRUB1	99	71.032	Tupaia_belangeri
ENSMAUG00000011101	Trub1	63	87.442	ENSTTRG00000005767	TRUB1	81	87.324	Tursiops_truncatus
ENSMAUG00000011101	Trub1	89	86.000	ENSUAMG00000024876	TRUB1	85	85.906	Ursus_americanus
ENSMAUG00000011101	Trub1	87	85.763	ENSUMAG00000002411	TRUB1	83	85.714	Ursus_maritimus
ENSMAUG00000011101	Trub1	89	84.718	ENSVPAG00000005507	TRUB1	85	84.615	Vicugna_pacos
ENSMAUG00000011101	Trub1	87	85.811	ENSVVUG00000010085	TRUB1	67	85.714	Vulpes_vulpes
ENSMAUG00000011101	Trub1	80	63.235	ENSXETG00000023828	trub1	95	63.258	Xenopus_tropicalis
ENSMAUG00000011101	Trub1	71	61.728	ENSXCOG00000017847	trub1	83	61.864	Xiphophorus_couchianus
ENSMAUG00000011101	Trub1	72	62.041	ENSXMAG00000014701	trub1	86	62.185	Xiphophorus_maculatus