EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000011944 (Gene tree)
Gene ID: 101826331
Gene Symbol: Snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 19840 bases
Position: chrKB708133.1:14934352-14954191
Accession: 101826331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000011328	zf-U11-48K	PF05253.12	7.2e-09	1	1
ENSMAUP00000011322	zf-U11-48K	PF05253.12	9.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000015211	-	834	-	ENSMAUP00000011328	277 (aa)	-	-
ENSMAUT00000015204	-	1139	XM_005066372	ENSMAUP00000011322	336 (aa)	XP_005066429	A0A1U7Q765

Gene Model

Click here to download ENSMAUG00000011944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000011944's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000011944	Snrnp48	100	88.201	ENSG00000168566	SNRNP48	100	89.086	Homo_sapiens
ENSMAUG00000011944	Snrnp48	82	48.239	ENSAPOG00000021430	snrnp48	96	44.023	Acanthochromis_polyacanthus
ENSMAUG00000011944	Snrnp48	99	86.264	ENSAMEG00000017349	SNRNP48	100	85.879	Ailuropoda_melanoleuca
ENSMAUG00000011944	Snrnp48	89	43.564	ENSACIG00000002032	snrnp48	96	41.246	Amphilophus_citrinellus
ENSMAUG00000011944	Snrnp48	82	47.887	ENSAOCG00000010562	snrnp48	96	44.092	Amphiprion_ocellaris
ENSMAUG00000011944	Snrnp48	82	48.227	ENSAPEG00000003231	snrnp48	96	44.348	Amphiprion_percula
ENSMAUG00000011944	Snrnp48	71	51.240	ENSATEG00000020210	snrnp48	81	48.929	Anabas_testudineus
ENSMAUG00000011944	Snrnp48	82	65.278	ENSACAG00000002811	SNRNP48	89	65.278	Anolis_carolinensis
ENSMAUG00000011944	Snrnp48	100	87.611	ENSANAG00000033538	SNRNP48	100	88.496	Aotus_nancymaae
ENSMAUG00000011944	Snrnp48	93	45.963	ENSAMXG00000015309	snrnp48	97	44.412	Astyanax_mexicanus
ENSMAUG00000011944	Snrnp48	100	82.941	ENSBTAG00000001123	SNRNP48	100	83.824	Bos_taurus
ENSMAUG00000011944	Snrnp48	100	88.201	ENSCJAG00000021330	SNRNP48	100	89.086	Callithrix_jacchus
ENSMAUG00000011944	Snrnp48	99	88.393	ENSCAFG00000009574	SNRNP48	83	88.690	Canis_familiaris
ENSMAUG00000011944	Snrnp48	99	88.690	ENSCAFG00020013203	SNRNP48	99	88.988	Canis_lupus_dingo
ENSMAUG00000011944	Snrnp48	100	84.412	ENSCHIG00000015216	SNRNP48	100	85.294	Capra_hircus
ENSMAUG00000011944	Snrnp48	100	87.611	ENSTSYG00000000698	SNRNP48	100	88.496	Carlito_syrichta
ENSMAUG00000011944	Snrnp48	90	82.736	ENSCAPG00000006768	SNRNP48	100	82.736	Cavia_aperea
ENSMAUG00000011944	Snrnp48	100	86.431	ENSCPOG00000007910	SNRNP48	100	86.431	Cavia_porcellus
ENSMAUG00000011944	Snrnp48	100	86.726	ENSCCAG00000035652	SNRNP48	100	87.611	Cebus_capucinus
ENSMAUG00000011944	Snrnp48	100	87.611	ENSCATG00000033947	SNRNP48	100	88.496	Cercocebus_atys
ENSMAUG00000011944	Snrnp48	100	86.726	ENSCLAG00000003765	SNRNP48	100	87.611	Chinchilla_lanigera
ENSMAUG00000011944	Snrnp48	100	88.201	ENSCSAG00000007409	SNRNP48	100	89.086	Chlorocebus_sabaeus
ENSMAUG00000011944	Snrnp48	85	64.901	ENSCPBG00000019146	SNRNP48	92	64.901	Chrysemys_picta_bellii
ENSMAUG00000011944	Snrnp48	100	88.201	ENSCANG00000030017	SNRNP48	100	89.086	Colobus_angolensis_palliatus
ENSMAUG00000011944	Snrnp48	99	76.276	ENSCGRG00001008805	-	95	75.075	Cricetulus_griseus_chok1gshd
ENSMAUG00000011944	Snrnp48	100	97.033	ENSCGRG00001001076	-	100	97.033	Cricetulus_griseus_chok1gshd
ENSMAUG00000011944	Snrnp48	100	97.033	ENSCGRG00000007781	Snrnp48	100	97.033	Cricetulus_griseus_crigri
ENSMAUG00000011944	Snrnp48	77	47.328	ENSCSEG00000000722	snrnp48	91	31.378	Cynoglossus_semilaevis
ENSMAUG00000011944	Snrnp48	95	42.812	ENSCVAG00000019829	snrnp48	65	48.077	Cyprinodon_variegatus
ENSMAUG00000011944	Snrnp48	82	46.290	ENSDARG00000039989	snrnp48	96	43.713	Danio_rerio
ENSMAUG00000011944	Snrnp48	99	86.567	ENSDNOG00000014978	SNRNP48	99	87.164	Dasypus_novemcinctus
ENSMAUG00000011944	Snrnp48	99	87.021	ENSDORG00000015140	Snrnp48	100	86.765	Dipodomys_ordii
ENSMAUG00000011944	Snrnp48	69	34.010	ENSEBUG00000016376	-	84	33.971	Eptatretus_burgeri
ENSMAUG00000011944	Snrnp48	99	88.462	ENSEASG00005012021	SNRNP48	100	88.496	Equus_asinus_asinus
ENSMAUG00000011944	Snrnp48	100	89.086	ENSECAG00000026937	SNRNP48	100	89.381	Equus_caballus
ENSMAUG00000011944	Snrnp48	100	78.788	ENSEEUG00000015437	SNRNP48	99	67.160	Erinaceus_europaeus
ENSMAUG00000011944	Snrnp48	88	45.574	ENSELUG00000009766	snrnp48	78	46.643	Esox_lucius
ENSMAUG00000011944	Snrnp48	100	88.791	ENSFCAG00000018853	SNRNP48	100	89.086	Felis_catus
ENSMAUG00000011944	Snrnp48	83	63.699	ENSFALG00000007797	SNRNP48	93	64.384	Ficedula_albicollis
ENSMAUG00000011944	Snrnp48	99	84.615	ENSFDAG00000009231	SNRNP48	100	86.136	Fukomys_damarensis
ENSMAUG00000011944	Snrnp48	60	55.446	ENSFHEG00000014647	snrnp48	97	45.946	Fundulus_heteroclitus
ENSMAUG00000011944	Snrnp48	73	47.390	ENSGMOG00000018599	-	98	42.415	Gadus_morhua
ENSMAUG00000011944	Snrnp48	78	65.201	ENSGALG00000013005	SNRNP48	92	65.201	Gallus_gallus
ENSMAUG00000011944	Snrnp48	97	42.151	ENSGAFG00000021639	snrnp48	97	42.566	Gambusia_affinis
ENSMAUG00000011944	Snrnp48	74	48.606	ENSGACG00000017756	-	96	44.343	Gasterosteus_aculeatus
ENSMAUG00000011944	Snrnp48	84	64.333	ENSGAGG00000000865	SNRNP48	97	64.333	Gopherus_agassizii
ENSMAUG00000011944	Snrnp48	100	88.201	ENSGGOG00000013220	SNRNP48	100	89.086	Gorilla_gorilla
ENSMAUG00000011944	Snrnp48	75	47.656	ENSHBUG00000017066	snrnp48	95	42.515	Haplochromis_burtoni
ENSMAUG00000011944	Snrnp48	99	86.391	ENSHGLG00000015241	SNRNP48	100	87.021	Heterocephalus_glaber_female
ENSMAUG00000011944	Snrnp48	99	86.391	ENSHGLG00100010027	SNRNP48	100	87.021	Heterocephalus_glaber_male
ENSMAUG00000011944	Snrnp48	73	46.748	ENSHCOG00000014066	snrnp48	92	40.816	Hippocampus_comes
ENSMAUG00000011944	Snrnp48	100	91.445	ENSSTOG00000014635	SNRNP48	100	92.330	Ictidomys_tridecemlineatus
ENSMAUG00000011944	Snrnp48	100	85.841	ENSJJAG00000011495	Snrnp48	100	86.136	Jaculus_jaculus
ENSMAUG00000011944	Snrnp48	91	43.831	ENSKMAG00000016514	snrnp48	94	42.353	Kryptolebias_marmoratus
ENSMAUG00000011944	Snrnp48	77	47.126	ENSLBEG00000026249	snrnp48	95	42.985	Labrus_bergylta
ENSMAUG00000011944	Snrnp48	98	52.695	ENSLACG00000003958	SNRNP48	99	51.603	Latimeria_chalumnae
ENSMAUG00000011944	Snrnp48	86	50.166	ENSLOCG00000004187	snrnp48	99	47.851	Lepisosteus_oculatus
ENSMAUG00000011944	Snrnp48	100	84.071	ENSLAFG00000011152	SNRNP48	100	84.956	Loxodonta_africana
ENSMAUG00000011944	Snrnp48	100	88.496	ENSMFAG00000045216	SNRNP48	100	89.381	Macaca_fascicularis
ENSMAUG00000011944	Snrnp48	100	88.496	ENSMMUG00000014785	SNRNP48	100	89.381	Macaca_mulatta
ENSMAUG00000011944	Snrnp48	100	88.201	ENSMNEG00000042269	SNRNP48	100	89.086	Macaca_nemestrina
ENSMAUG00000011944	Snrnp48	100	88.496	ENSMLEG00000034004	SNRNP48	100	89.381	Mandrillus_leucophaeus
ENSMAUG00000011944	Snrnp48	75	48.235	ENSMAMG00000018673	snrnp48	83	42.857	Mastacembelus_armatus
ENSMAUG00000011944	Snrnp48	82	64.846	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSMAUG00000011944	Snrnp48	100	87.316	ENSMICG00000012497	SNRNP48	100	88.201	Microcebus_murinus
ENSMAUG00000011944	Snrnp48	100	96.726	ENSMOCG00000015555	Snrnp48	100	96.726	Microtus_ochrogaster
ENSMAUG00000011944	Snrnp48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSMAUG00000011944	Snrnp48	99	69.653	ENSMODG00000009996	SNRNP48	93	69.942	Monodelphis_domestica
ENSMAUG00000011944	Snrnp48	78	48.289	ENSMALG00000005725	snrnp48	95	41.379	Monopterus_albus
ENSMAUG00000011944	Snrnp48	100	93.769	MGP_CAROLIEiJ_G0018441	Snrnp48	100	93.769	Mus_caroli
ENSMAUG00000011944	Snrnp48	100	93.769	ENSMUSG00000021431	Snrnp48	100	93.769	Mus_musculus
ENSMAUG00000011944	Snrnp48	100	94.362	MGP_PahariEiJ_G0019509	Snrnp48	100	94.362	Mus_pahari
ENSMAUG00000011944	Snrnp48	100	93.175	MGP_SPRETEiJ_G0019321	Snrnp48	100	93.175	Mus_spretus
ENSMAUG00000011944	Snrnp48	99	90.828	ENSNGAG00000004849	Snrnp48	99	90.828	Nannospalax_galili
ENSMAUG00000011944	Snrnp48	75	47.266	ENSNBRG00000012127	snrnp48	95	42.216	Neolamprologus_brichardi
ENSMAUG00000011944	Snrnp48	100	88.496	ENSNLEG00000011667	SNRNP48	100	89.381	Nomascus_leucogenys
ENSMAUG00000011944	Snrnp48	95	78.638	ENSOPRG00000015471	SNRNP48	100	78.019	Ochotona_princeps
ENSMAUG00000011944	Snrnp48	95	44.099	ENSONIG00000001520	snrnp48	95	41.983	Oreochromis_niloticus
ENSMAUG00000011944	Snrnp48	64	59.162	ENSOANG00000019888	-	100	62.500	Ornithorhynchus_anatinus
ENSMAUG00000011944	Snrnp48	85	88.811	ENSOCUG00000005168	SNRNP48	100	88.487	Oryctolagus_cuniculus
ENSMAUG00000011944	Snrnp48	98	44.118	ENSORLG00000015654	snrnp48	96	44.152	Oryzias_latipes
ENSMAUG00000011944	Snrnp48	89	46.278	ENSORLG00020015976	snrnp48	82	43.860	Oryzias_latipes_hni
ENSMAUG00000011944	Snrnp48	98	44.706	ENSORLG00015022379	snrnp48	82	44.737	Oryzias_latipes_hsok
ENSMAUG00000011944	Snrnp48	97	43.713	ENSOMEG00000022007	snrnp48	95	43.478	Oryzias_melastigma
ENSMAUG00000011944	Snrnp48	91	86.928	ENSOGAG00000005275	SNRNP48	96	86.751	Otolemur_garnettii
ENSMAUG00000011944	Snrnp48	85	85.017	ENSOARG00000017319	SNRNP48	100	85.017	Ovis_aries
ENSMAUG00000011944	Snrnp48	100	88.496	ENSPPAG00000032873	SNRNP48	100	89.381	Pan_paniscus
ENSMAUG00000011944	Snrnp48	100	88.496	ENSPPRG00000004283	SNRNP48	100	88.791	Panthera_pardus
ENSMAUG00000011944	Snrnp48	85	88.502	ENSPTIG00000013502	SNRNP48	100	88.850	Panthera_tigris_altaica
ENSMAUG00000011944	Snrnp48	100	88.496	ENSPTRG00000017703	SNRNP48	100	89.381	Pan_troglodytes
ENSMAUG00000011944	Snrnp48	100	88.496	ENSPANG00000000771	SNRNP48	100	89.381	Papio_anubis
ENSMAUG00000011944	Snrnp48	94	44.898	ENSPKIG00000013703	snrnp48	59	49.123	Paramormyrops_kingsleyae
ENSMAUG00000011944	Snrnp48	88	63.492	ENSPSIG00000002213	SNRNP48	97	63.492	Pelodiscus_sinensis
ENSMAUG00000011944	Snrnp48	79	46.154	ENSPMGG00000008120	snrnp48	95	46.154	Periophthalmus_magnuspinnatus
ENSMAUG00000011944	Snrnp48	100	97.329	ENSPEMG00000008872	Snrnp48	100	97.895	Peromyscus_maniculatus_bairdii
ENSMAUG00000011944	Snrnp48	85	47.569	ENSPFOG00000003578	snrnp48	96	43.529	Poecilia_formosa
ENSMAUG00000011944	Snrnp48	71	48.536	ENSPLAG00000002290	snrnp48	81	48.536	Poecilia_latipinna
ENSMAUG00000011944	Snrnp48	85	47.222	ENSPMEG00000018033	snrnp48	96	43.235	Poecilia_mexicana
ENSMAUG00000011944	Snrnp48	76	49.219	ENSPREG00000018541	snrnp48	96	43.391	Poecilia_reticulata
ENSMAUG00000011944	Snrnp48	100	87.021	ENSPPYG00000016209	SNRNP48	100	87.906	Pongo_abelii
ENSMAUG00000011944	Snrnp48	75	78.571	ENSPCAG00000011991	SNRNP48	99	69.663	Procavia_capensis
ENSMAUG00000011944	Snrnp48	100	86.431	ENSPVAG00000002854	SNRNP48	100	86.726	Pteropus_vampyrus
ENSMAUG00000011944	Snrnp48	75	47.656	ENSPNYG00000015399	snrnp48	89	45.775	Pundamilia_nyererei
ENSMAUG00000011944	Snrnp48	100	94.065	ENSRNOG00000013756	Snrnp48	100	94.065	Rattus_norvegicus
ENSMAUG00000011944	Snrnp48	92	88.710	ENSRBIG00000043856	SNRNP48	97	89.251	Rhinopithecus_bieti
ENSMAUG00000011944	Snrnp48	100	88.201	ENSRROG00000043229	SNRNP48	100	89.086	Rhinopithecus_roxellana
ENSMAUG00000011944	Snrnp48	100	88.201	ENSSBOG00000019486	SNRNP48	100	89.086	Saimiri_boliviensis_boliviensis
ENSMAUG00000011944	Snrnp48	98	70.058	ENSSHAG00000014483	SNRNP48	99	70.058	Sarcophilus_harrisii
ENSMAUG00000011944	Snrnp48	74	50.787	ENSSFOG00015006610	snrnp48	66	48.944	Scleropages_formosus
ENSMAUG00000011944	Snrnp48	89	44.518	ENSSDUG00000014953	snrnp48	96	42.197	Seriola_dumerili
ENSMAUG00000011944	Snrnp48	89	45.000	ENSSLDG00000005989	snrnp48	92	43.675	Seriola_lalandi_dorsalis
ENSMAUG00000011944	Snrnp48	84	63.423	ENSSPUG00000006257	SNRNP48	85	65.101	Sphenodon_punctatus
ENSMAUG00000011944	Snrnp48	95	41.975	ENSSPAG00000006454	snrnp48	93	43.491	Stegastes_partitus
ENSMAUG00000011944	Snrnp48	83	63.230	ENSTGUG00000007575	SNRNP48	93	63.230	Taeniopygia_guttata
ENSMAUG00000011944	Snrnp48	74	49.004	ENSTRUG00000007031	snrnp48	92	45.260	Takifugu_rubripes
ENSMAUG00000011944	Snrnp48	77	45.038	ENSTNIG00000012977	-	77	45.038	Tetraodon_nigroviridis
ENSMAUG00000011944	Snrnp48	100	73.077	ENSTBEG00000015620	SNRNP48	100	73.077	Tupaia_belangeri
ENSMAUG00000011944	Snrnp48	100	86.726	ENSTTRG00000016715	SNRNP48	100	86.726	Tursiops_truncatus
ENSMAUG00000011944	Snrnp48	100	88.496	ENSUAMG00000003690	SNRNP48	100	88.496	Ursus_americanus
ENSMAUG00000011944	Snrnp48	85	83.972	ENSVPAG00000003557	SNRNP48	100	83.972	Vicugna_pacos
ENSMAUG00000011944	Snrnp48	99	88.690	ENSVVUG00000004996	SNRNP48	99	88.988	Vulpes_vulpes
ENSMAUG00000011944	Snrnp48	86	52.349	ENSXETG00000020447	snrnp48	97	50.595	Xenopus_tropicalis
ENSMAUG00000011944	Snrnp48	71	48.333	ENSXCOG00000004478	snrnp48	97	33.019	Xiphophorus_couchianus
ENSMAUG00000011944	Snrnp48	85	47.569	ENSXMAG00000013595	snrnp48	96	43.678	Xiphophorus_maculatus