EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000012059 (Gene tree)
Gene ID: 101823589
Gene Symbol: Patl1
Alias: Pat1b
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 26720 bases
Position: chrKB708127.1:46557082-46583801
Accession: 101823589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000011556	PAT1	PF09770.9	3.1e-16	1	1
ENSMAUP00000011546	PAT1	PF09770.9	3.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000015434	-	2040	-	ENSMAUP00000011546	679 (aa)	-	-
ENSMAUT00000015444	-	2031	XM_005063260	ENSMAUP00000011556	676 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000012059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012059	Patl1	97	96.012	ENSG00000166889	PATL1	85	96.012	Homo_sapiens
ENSMAUG00000012059	Patl1	73	54.487	ENSAPOG00000021290	patl1	98	41.402	Acanthochromis_polyacanthus
ENSMAUG00000012059	Patl1	96	95.399	ENSAMEG00000014215	PATL1	85	95.399	Ailuropoda_melanoleuca
ENSMAUG00000012059	Patl1	55	31.316	ENSAMEG00000014997	PATL2	63	32.362	Ailuropoda_melanoleuca
ENSMAUG00000012059	Patl1	85	44.375	ENSACIG00000005182	patl1	81	44.737	Amphilophus_citrinellus
ENSMAUG00000012059	Patl1	84	46.135	ENSAOCG00000021993	patl1	95	42.283	Amphiprion_ocellaris
ENSMAUG00000012059	Patl1	72	54.605	ENSAPEG00000021391	patl1	72	44.946	Amphiprion_percula
ENSMAUG00000012059	Patl1	62	30.769	ENSATEG00000019567	patl2	70	30.353	Anabas_testudineus
ENSMAUG00000012059	Patl1	86	44.992	ENSATEG00000002230	patl1	74	44.055	Anabas_testudineus
ENSMAUG00000012059	Patl1	70	62.782	ENSAPLG00000013394	PATL1	99	63.138	Anas_platyrhynchos
ENSMAUG00000012059	Patl1	97	80.734	ENSACAG00000006607	PATL1	85	80.734	Anolis_carolinensis
ENSMAUG00000012059	Patl1	96	96.012	ENSANAG00000023078	PATL1	85	96.012	Aotus_nancymaae
ENSMAUG00000012059	Patl1	72	52.597	ENSACLG00000005144	patl1	71	44.688	Astatotilapia_calliptera
ENSMAUG00000012059	Patl1	82	50.000	ENSAMXG00000010731	patl1	88	50.000	Astyanax_mexicanus
ENSMAUG00000012059	Patl1	96	95.077	ENSBTAG00000005913	PATL1	85	94.880	Bos_taurus
ENSMAUG00000012059	Patl1	96	96.012	ENSCJAG00000016192	PATL1	85	96.012	Callithrix_jacchus
ENSMAUG00000012059	Patl1	96	95.399	ENSCAFG00000007581	PATL1	85	95.399	Canis_familiaris
ENSMAUG00000012059	Patl1	96	95.399	ENSCAFG00020001648	PATL1	85	95.399	Canis_lupus_dingo
ENSMAUG00000012059	Patl1	96	93.538	ENSCHIG00000025913	PATL1	95	72.503	Capra_hircus
ENSMAUG00000012059	Patl1	96	95.356	ENSTSYG00000012748	PATL1	82	95.356	Carlito_syrichta
ENSMAUG00000012059	Patl1	96	92.025	ENSCAPG00000013668	PATL1	85	92.025	Cavia_aperea
ENSMAUG00000012059	Patl1	96	92.025	ENSCPOG00000006827	PATL1	86	92.025	Cavia_porcellus
ENSMAUG00000012059	Patl1	96	96.012	ENSCCAG00000023759	PATL1	85	96.012	Cebus_capucinus
ENSMAUG00000012059	Patl1	96	96.626	ENSCATG00000009629	PATL1	85	96.626	Cercocebus_atys
ENSMAUG00000012059	Patl1	97	91.411	ENSCLAG00000003427	PATL1	86	91.411	Chinchilla_lanigera
ENSMAUG00000012059	Patl1	92	74.425	ENSCSAG00000006095	PATL1	100	74.425	Chlorocebus_sabaeus
ENSMAUG00000012059	Patl1	63	96.970	ENSCHOG00000001611	PATL1	72	96.970	Choloepus_hoffmanni
ENSMAUG00000012059	Patl1	50	36.471	ENSCPBG00000006150	PATL2	50	36.152	Chrysemys_picta_bellii
ENSMAUG00000012059	Patl1	74	36.158	ENSCING00000021535	-	81	36.158	Ciona_intestinalis
ENSMAUG00000012059	Patl1	96	96.626	ENSCANG00000039197	PATL1	85	96.626	Colobus_angolensis_palliatus
ENSMAUG00000012059	Patl1	97	99.080	ENSCGRG00001024927	Patl1	85	99.080	Cricetulus_griseus_chok1gshd
ENSMAUG00000012059	Patl1	97	99.080	ENSCGRG00000000461	Patl1	86	99.080	Cricetulus_griseus_crigri
ENSMAUG00000012059	Patl1	86	42.308	ENSCSEG00000008261	patl1	82	44.515	Cynoglossus_semilaevis
ENSMAUG00000012059	Patl1	57	30.787	ENSCVAG00000016203	patl2	63	31.169	Cyprinodon_variegatus
ENSMAUG00000012059	Patl1	78	50.262	ENSCVAG00000006664	patl1	86	43.844	Cyprinodon_variegatus
ENSMAUG00000012059	Patl1	96	41.580	ENSDARG00000017423	patl1	95	40.669	Danio_rerio
ENSMAUG00000012059	Patl1	96	94.785	ENSDNOG00000038865	PATL1	86	94.785	Dasypus_novemcinctus
ENSMAUG00000012059	Patl1	55	31.414	ENSDNOG00000036837	PATL2	56	33.333	Dasypus_novemcinctus
ENSMAUG00000012059	Patl1	96	95.062	ENSDORG00000000237	Patl1	85	94.864	Dipodomys_ordii
ENSMAUG00000012059	Patl1	96	95.092	ENSEASG00005007963	PATL1	85	95.092	Equus_asinus_asinus
ENSMAUG00000012059	Patl1	55	31.452	ENSEASG00005017984	PATL2	58	34.579	Equus_asinus_asinus
ENSMAUG00000012059	Patl1	96	94.785	ENSECAG00000011411	PATL1	85	94.785	Equus_caballus
ENSMAUG00000012059	Patl1	96	39.198	ENSELUG00000024249	patl1	93	40.750	Esox_lucius
ENSMAUG00000012059	Patl1	96	95.706	ENSFCAG00000015573	PATL1	85	95.706	Felis_catus
ENSMAUG00000012059	Patl1	97	84.969	ENSFALG00000012150	PATL1	87	84.969	Ficedula_albicollis
ENSMAUG00000012059	Patl1	96	91.950	ENSFDAG00000016128	PATL1	86	91.515	Fukomys_damarensis
ENSMAUG00000012059	Patl1	55	33.506	ENSFHEG00000009727	patl2	65	33.807	Fundulus_heteroclitus
ENSMAUG00000012059	Patl1	73	52.500	ENSFHEG00000017790	patl1	74	44.462	Fundulus_heteroclitus
ENSMAUG00000012059	Patl1	50	32.174	ENSGMOG00000005666	patl2	83	32.102	Gadus_morhua
ENSMAUG00000012059	Patl1	96	58.391	ENSGALG00000042641	PATL1	95	60.333	Gallus_gallus
ENSMAUG00000012059	Patl1	72	56.494	ENSGAFG00000006508	patl1	75	44.240	Gambusia_affinis
ENSMAUG00000012059	Patl1	97	43.194	ENSGACG00000016448	patl1	94	44.276	Gasterosteus_aculeatus
ENSMAUG00000012059	Patl1	96	86.810	ENSGAGG00000004461	PATL1	89	86.810	Gopherus_agassizii
ENSMAUG00000012059	Patl1	96	96.012	ENSGGOG00000004335	PATL1	85	96.012	Gorilla_gorilla
ENSMAUG00000012059	Patl1	60	31.385	ENSHBUG00000005929	patl2	61	32.658	Haplochromis_burtoni
ENSMAUG00000012059	Patl1	72	54.305	ENSHBUG00000005365	patl1	71	44.688	Haplochromis_burtoni
ENSMAUG00000012059	Patl1	97	71.468	ENSHGLG00000018173	PATL1	85	93.636	Heterocephalus_glaber_female
ENSMAUG00000012059	Patl1	96	90.184	ENSHGLG00100003453	PATL1	86	90.184	Heterocephalus_glaber_male
ENSMAUG00000012059	Patl1	85	42.410	ENSHCOG00000001898	patl1	75	44.671	Hippocampus_comes
ENSMAUG00000012059	Patl1	96	96.319	ENSSTOG00000013764	PATL1	95	74.658	Ictidomys_tridecemlineatus
ENSMAUG00000012059	Patl1	97	95.092	ENSJJAG00000010135	Patl1	86	95.092	Jaculus_jaculus
ENSMAUG00000012059	Patl1	74	53.459	ENSKMAG00000020848	patl1	73	44.360	Kryptolebias_marmoratus
ENSMAUG00000012059	Patl1	85	44.828	ENSLBEG00000023617	patl1	72	44.582	Labrus_bergylta
ENSMAUG00000012059	Patl1	97	66.458	ENSLACG00000004640	PATL1	88	66.458	Latimeria_chalumnae
ENSMAUG00000012059	Patl1	96	96.933	ENSLAFG00000015161	PATL1	85	96.933	Loxodonta_africana
ENSMAUG00000012059	Patl1	52	32.133	ENSLAFG00000031124	PATL2	58	33.438	Loxodonta_africana
ENSMAUG00000012059	Patl1	96	96.626	ENSMFAG00000040851	PATL1	85	96.626	Macaca_fascicularis
ENSMAUG00000012059	Patl1	96	96.626	ENSMMUG00000017287	PATL1	85	96.626	Macaca_mulatta
ENSMAUG00000012059	Patl1	96	96.626	ENSMNEG00000038692	PATL1	85	96.626	Macaca_nemestrina
ENSMAUG00000012059	Patl1	96	96.626	ENSMLEG00000030044	PATL1	85	96.626	Mandrillus_leucophaeus
ENSMAUG00000012059	Patl1	59	30.377	ENSMAMG00000013327	patl2	50	34.036	Mastacembelus_armatus
ENSMAUG00000012059	Patl1	96	41.255	ENSMAMG00000003950	patl1	94	42.063	Mastacembelus_armatus
ENSMAUG00000012059	Patl1	72	52.597	ENSMZEG00005013404	patl1	71	44.688	Maylandia_zebra
ENSMAUG00000012059	Patl1	89	57.652	ENSMGAG00000003406	PATL1	94	58.780	Meleagris_gallopavo
ENSMAUG00000012059	Patl1	96	95.370	ENSMICG00000004172	PATL1	81	97.340	Microcebus_murinus
ENSMAUG00000012059	Patl1	97	76.301	ENSMOCG00000010087	Patl1	95	76.301	Microtus_ochrogaster
ENSMAUG00000012059	Patl1	96	40.280	ENSMMOG00000013711	patl1	94	39.136	Mola_mola
ENSMAUG00000012059	Patl1	96	89.877	ENSMODG00000020201	PATL1	86	89.877	Monodelphis_domestica
ENSMAUG00000012059	Patl1	97	97.853	MGP_CAROLIEiJ_G0022739	Patl1	85	97.853	Mus_caroli
ENSMAUG00000012059	Patl1	97	97.853	ENSMUSG00000046139	Patl1	85	97.853	Mus_musculus
ENSMAUG00000012059	Patl1	97	98.160	MGP_PahariEiJ_G0014233	Patl1	85	98.160	Mus_pahari
ENSMAUG00000012059	Patl1	97	97.853	MGP_SPRETEiJ_G0023652	Patl1	85	97.853	Mus_spretus
ENSMAUG00000012059	Patl1	97	95.706	ENSMPUG00000014607	PATL1	85	95.706	Mustela_putorius_furo
ENSMAUG00000012059	Patl1	96	95.706	ENSMLUG00000011169	PATL1	85	95.706	Myotis_lucifugus
ENSMAUG00000012059	Patl1	96	95.092	ENSNGAG00000003682	Patl1	85	95.092	Nannospalax_galili
ENSMAUG00000012059	Patl1	60	31.236	ENSNBRG00000011745	patl2	58	32.405	Neolamprologus_brichardi
ENSMAUG00000012059	Patl1	96	70.718	ENSNLEG00000013081	PATL1	95	70.718	Nomascus_leucogenys
ENSMAUG00000012059	Patl1	74	92.258	ENSMEUG00000009391	PATL1	78	92.258	Notamacropus_eugenii
ENSMAUG00000012059	Patl1	67	95.399	ENSOPRG00000007963	PATL1	69	95.399	Ochotona_princeps
ENSMAUG00000012059	Patl1	82	91.667	ENSODEG00000001792	PATL1	97	91.667	Octodon_degus
ENSMAUG00000012059	Patl1	72	54.667	ENSONIG00000004170	patl1	94	43.497	Oreochromis_niloticus
ENSMAUG00000012059	Patl1	50	35.817	ENSOANG00000001538	-	69	36.228	Ornithorhynchus_anatinus
ENSMAUG00000012059	Patl1	96	96.933	ENSOCUG00000002156	PATL1	85	96.933	Oryctolagus_cuniculus
ENSMAUG00000012059	Patl1	74	50.000	ENSORLG00015022240	patl1	78	45.227	Oryzias_latipes_hsok
ENSMAUG00000012059	Patl1	50	35.777	ENSOMEG00000021628	patl2	67	30.980	Oryzias_melastigma
ENSMAUG00000012059	Patl1	96	96.626	ENSOGAG00000004351	PATL1	85	96.626	Otolemur_garnettii
ENSMAUG00000012059	Patl1	54	32.533	ENSOARG00000003762	PATL2	56	34.824	Ovis_aries
ENSMAUG00000012059	Patl1	96	93.846	ENSOARG00000012005	PATL1	91	72.777	Ovis_aries
ENSMAUG00000012059	Patl1	96	96.012	ENSPPAG00000034275	PATL1	85	96.012	Pan_paniscus
ENSMAUG00000012059	Patl1	96	95.399	ENSPPRG00000020639	PATL1	86	95.399	Panthera_pardus
ENSMAUG00000012059	Patl1	96	95.399	ENSPTIG00000019298	PATL1	85	95.399	Panthera_tigris_altaica
ENSMAUG00000012059	Patl1	96	81.714	ENSPTRG00000003697	PATL1	94	82.000	Pan_troglodytes
ENSMAUG00000012059	Patl1	96	96.626	ENSPANG00000035620	PATL1	85	96.626	Papio_anubis
ENSMAUG00000012059	Patl1	97	40.939	ENSPKIG00000016224	patl1	98	41.592	Paramormyrops_kingsleyae
ENSMAUG00000012059	Patl1	96	85.890	ENSPSIG00000016206	PATL1	81	85.890	Pelodiscus_sinensis
ENSMAUG00000012059	Patl1	70	54.478	ENSPMGG00000002644	patl1	94	40.000	Periophthalmus_magnuspinnatus
ENSMAUG00000012059	Patl1	50	34.808	ENSPMGG00000014550	patl2	51	35.329	Periophthalmus_magnuspinnatus
ENSMAUG00000012059	Patl1	97	76.438	ENSPEMG00000014215	Patl1	95	76.438	Peromyscus_maniculatus_bairdii
ENSMAUG00000012059	Patl1	96	89.264	ENSPCIG00000010852	PATL1	85	89.264	Phascolarctos_cinereus
ENSMAUG00000012059	Patl1	97	40.565	ENSPFOG00000007768	patl1	95	40.788	Poecilia_formosa
ENSMAUG00000012059	Patl1	73	56.494	ENSPLAG00000018465	patl1	75	44.479	Poecilia_latipinna
ENSMAUG00000012059	Patl1	85	44.255	ENSPMEG00000006555	patl1	75	44.479	Poecilia_mexicana
ENSMAUG00000012059	Patl1	73	41.860	ENSPREG00000003874	patl1	70	42.832	Poecilia_reticulata
ENSMAUG00000012059	Patl1	96	96.933	ENSPPYG00000003230	PATL1	85	96.933	Pongo_abelii
ENSMAUG00000012059	Patl1	55	32.292	ENSPCOG00000000295	PATL2	92	34.694	Propithecus_coquereli
ENSMAUG00000012059	Patl1	96	96.933	ENSPCOG00000020770	PATL1	85	96.933	Propithecus_coquereli
ENSMAUG00000012059	Patl1	86	71.607	ENSPVAG00000015239	PATL1	100	84.399	Pteropus_vampyrus
ENSMAUG00000012059	Patl1	60	31.304	ENSPNYG00000017381	patl2	61	32.576	Pundamilia_nyererei
ENSMAUG00000012059	Patl1	96	39.821	ENSPNAG00000017907	patl1	94	41.078	Pygocentrus_nattereri
ENSMAUG00000012059	Patl1	97	74.760	ENSRNOG00000021052	Patl1	95	74.760	Rattus_norvegicus
ENSMAUG00000012059	Patl1	97	94.864	ENSRBIG00000032263	PATL1	84	94.864	Rhinopithecus_bieti
ENSMAUG00000012059	Patl1	96	96.933	ENSRROG00000032861	PATL1	85	96.933	Rhinopithecus_roxellana
ENSMAUG00000012059	Patl1	96	96.012	ENSSBOG00000025195	PATL1	85	96.012	Saimiri_boliviensis_boliviensis
ENSMAUG00000012059	Patl1	53	33.799	ENSSBOG00000034766	PATL2	60	34.111	Saimiri_boliviensis_boliviensis
ENSMAUG00000012059	Patl1	96	89.877	ENSSHAG00000004309	PATL1	85	89.877	Sarcophilus_harrisii
ENSMAUG00000012059	Patl1	96	36.213	ENSSFOG00015009614	patl1	94	40.808	Scleropages_formosus
ENSMAUG00000012059	Patl1	85	44.044	ENSSMAG00000009482	patl1	72	44.582	Scophthalmus_maximus
ENSMAUG00000012059	Patl1	63	30.977	ENSSMAG00000017262	patl2	53	34.835	Scophthalmus_maximus
ENSMAUG00000012059	Patl1	85	43.302	ENSSDUG00000005362	patl1	71	43.210	Seriola_dumerili
ENSMAUG00000012059	Patl1	85	43.458	ENSSLDG00000019146	patl1	71	43.364	Seriola_lalandi_dorsalis
ENSMAUG00000012059	Patl1	79	95.092	ENSSARG00000009600	PATL1	70	95.092	Sorex_araneus
ENSMAUG00000012059	Patl1	96	84.969	ENSSPUG00000009453	PATL1	85	84.969	Sphenodon_punctatus
ENSMAUG00000012059	Patl1	57	30.752	ENSSPAG00000004784	patl2	62	31.111	Stegastes_partitus
ENSMAUG00000012059	Patl1	73	54.487	ENSSPAG00000003187	patl1	79	44.427	Stegastes_partitus
ENSMAUG00000012059	Patl1	96	95.706	ENSSSCG00000013124	PATL1	85	95.706	Sus_scrofa
ENSMAUG00000012059	Patl1	97	81.602	ENSTGUG00000006222	PATL1	89	81.602	Taeniopygia_guttata
ENSMAUG00000012059	Patl1	96	38.064	ENSTRUG00000000709	patl1	94	38.830	Takifugu_rubripes
ENSMAUG00000012059	Patl1	87	92.901	ENSTBEG00000000796	PATL1	78	92.749	Tupaia_belangeri
ENSMAUG00000012059	Patl1	71	96.154	ENSTTRG00000009389	PATL1	74	96.154	Tursiops_truncatus
ENSMAUG00000012059	Patl1	95	95.312	ENSUMAG00000018634	PATL1	90	95.399	Ursus_maritimus
ENSMAUG00000012059	Patl1	72	97.222	ENSVPAG00000009224	PATL1	75	97.222	Vicugna_pacos
ENSMAUG00000012059	Patl1	96	95.399	ENSVVUG00000016668	PATL1	90	95.399	Vulpes_vulpes
ENSMAUG00000012059	Patl1	50	32.570	ENSXETG00000014167	patl2	80	31.041	Xenopus_tropicalis
ENSMAUG00000012059	Patl1	50	46.667	ENSXCOG00000010808	patl1	88	43.203	Xiphophorus_couchianus
ENSMAUG00000012059	Patl1	73	55.844	ENSXMAG00000013834	patl1	75	44.547	Xiphophorus_maculatus