EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000012118 (Gene tree)
Gene ID: 101828203
Gene Symbol: Lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 77234 bases
Position: chrKB708197.1:6246133-6323366
Accession: 101828203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000011631	PPR	PF01535.20	2.9e-30	1	5
ENSMAUP00000011631	PPR	PF01535.20	2.9e-30	2	5
ENSMAUP00000011631	PPR	PF01535.20	2.9e-30	3	5
ENSMAUP00000011631	PPR	PF01535.20	2.9e-30	4	5
ENSMAUP00000011631	PPR	PF01535.20	2.9e-30	5	5
ENSMAUP00000011622	PPR	PF01535.20	4.2e-30	1	5
ENSMAUP00000011622	PPR	PF01535.20	4.2e-30	2	5
ENSMAUP00000011622	PPR	PF01535.20	4.2e-30	3	5
ENSMAUP00000011622	PPR	PF01535.20	4.2e-30	4	5
ENSMAUP00000011622	PPR	PF01535.20	4.2e-30	5	5
ENSMAUP00000011616	PPR	PF01535.20	5.4e-30	1	5
ENSMAUP00000011616	PPR	PF01535.20	5.4e-30	2	5
ENSMAUP00000011616	PPR	PF01535.20	5.4e-30	3	5
ENSMAUP00000011616	PPR	PF01535.20	5.4e-30	4	5
ENSMAUP00000011616	PPR	PF01535.20	5.4e-30	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000015520	-	3999	-	ENSMAUP00000011631	1332 (aa)	-	-
ENSMAUT00000015504	-	4400	XM_005077258	ENSMAUP00000011616	1392 (aa)	XP_005077315	A0A1U7QMZ7
ENSMAUT00000015510	-	4110	-	ENSMAUP00000011622	1369 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000012118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012118	Lrpprc	99	50.959	ENSAPOG00000016610	lrpprc	99	50.596	Acanthochromis_polyacanthus
ENSMAUG00000012118	Lrpprc	98	78.006	ENSAMEG00000005852	LRPPRC	100	77.751	Ailuropoda_melanoleuca
ENSMAUG00000012118	Lrpprc	99	50.604	ENSACIG00000009604	lrpprc	99	48.582	Amphilophus_citrinellus
ENSMAUG00000012118	Lrpprc	99	50.933	ENSAOCG00000005886	lrpprc	99	50.140	Amphiprion_ocellaris
ENSMAUG00000012118	Lrpprc	97	55.916	ENSAPEG00000002937	lrpprc	97	58.526	Amphiprion_percula
ENSMAUG00000012118	Lrpprc	92	61.765	ENSATEG00000010555	lrpprc	95	61.765	Anabas_testudineus
ENSMAUG00000012118	Lrpprc	99	60.310	ENSACAG00000029278	LRPPRC	99	59.957	Anolis_carolinensis
ENSMAUG00000012118	Lrpprc	100	76.252	ENSANAG00000027440	LRPPRC	100	76.252	Aotus_nancymaae
ENSMAUG00000012118	Lrpprc	99	50.038	ENSACLG00000023712	lrpprc	92	57.204	Astatotilapia_calliptera
ENSMAUG00000012118	Lrpprc	100	75.680	ENSCJAG00000000794	LRPPRC	100	75.680	Callithrix_jacchus
ENSMAUG00000012118	Lrpprc	99	78.305	ENSCHIG00000020173	LRPPRC	99	78.305	Capra_hircus
ENSMAUG00000012118	Lrpprc	99	61.326	ENSCAPG00000013631	LRPPRC	100	60.838	Cavia_aperea
ENSMAUG00000012118	Lrpprc	89	76.119	ENSCPOG00000000204	LRPPRC	100	77.032	Cavia_porcellus
ENSMAUG00000012118	Lrpprc	100	75.554	ENSCCAG00000031900	LRPPRC	100	75.556	Cebus_capucinus
ENSMAUG00000012118	Lrpprc	100	76.681	ENSCATG00000014187	LRPPRC	99	76.471	Cercocebus_atys
ENSMAUG00000012118	Lrpprc	99	76.163	ENSCLAG00000005203	LRPPRC	99	76.092	Chinchilla_lanigera
ENSMAUG00000012118	Lrpprc	100	76.896	ENSCSAG00000013233	LRPPRC	100	76.896	Chlorocebus_sabaeus
ENSMAUG00000012118	Lrpprc	84	75.143	ENSCHOG00000003631	LRPPRC	84	75.143	Choloepus_hoffmanni
ENSMAUG00000012118	Lrpprc	100	72.566	ENSCANG00000034961	LRPPRC	100	87.500	Colobus_angolensis_palliatus
ENSMAUG00000012118	Lrpprc	100	90.374	ENSCGRG00001016261	Lrpprc	100	90.374	Cricetulus_griseus_chok1gshd
ENSMAUG00000012118	Lrpprc	100	90.374	ENSCGRG00000004072	Lrpprc	100	90.374	Cricetulus_griseus_crigri
ENSMAUG00000012118	Lrpprc	99	42.708	ENSCSEG00000003850	lrpprc	96	49.699	Cynoglossus_semilaevis
ENSMAUG00000012118	Lrpprc	100	50.596	ENSCVAG00000012967	lrpprc	99	50.421	Cyprinodon_variegatus
ENSMAUG00000012118	Lrpprc	99	48.456	ENSDARG00000043970	lrpprc	98	48.042	Danio_rerio
ENSMAUG00000012118	Lrpprc	82	57.205	ENSDNOG00000032336	-	100	57.205	Dasypus_novemcinctus
ENSMAUG00000012118	Lrpprc	100	74.785	ENSDNOG00000012594	-	100	74.785	Dasypus_novemcinctus
ENSMAUG00000012118	Lrpprc	100	79.770	ENSDORG00000012233	Lrpprc	100	79.770	Dipodomys_ordii
ENSMAUG00000012118	Lrpprc	99	75.305	ENSETEG00000006657	LRPPRC	99	75.305	Echinops_telfairi
ENSMAUG00000012118	Lrpprc	87	65.863	ENSEEUG00000012340	LRPPRC	93	65.863	Erinaceus_europaeus
ENSMAUG00000012118	Lrpprc	99	49.216	ENSELUG00000012803	lrpprc	98	49.737	Esox_lucius
ENSMAUG00000012118	Lrpprc	99	79.469	ENSFCAG00000013468	LRPPRC	99	79.469	Felis_catus
ENSMAUG00000012118	Lrpprc	99	54.559	ENSFALG00000012738	LRPPRC	99	54.925	Ficedula_albicollis
ENSMAUG00000012118	Lrpprc	100	74.786	ENSFDAG00000015328	LRPPRC	100	74.786	Fukomys_damarensis
ENSMAUG00000012118	Lrpprc	99	50.260	ENSFHEG00000019604	lrpprc	99	49.719	Fundulus_heteroclitus
ENSMAUG00000012118	Lrpprc	99	47.494	ENSGMOG00000008337	lrpprc	99	46.495	Gadus_morhua
ENSMAUG00000012118	Lrpprc	99	50.371	ENSGAFG00000001455	lrpprc	99	49.894	Gambusia_affinis
ENSMAUG00000012118	Lrpprc	99	50.111	ENSGACG00000010679	lrpprc	99	50.777	Gasterosteus_aculeatus
ENSMAUG00000012118	Lrpprc	99	51.293	ENSHBUG00000000393	lrpprc	97	50.387	Haplochromis_burtoni
ENSMAUG00000012118	Lrpprc	100	75.911	ENSHGLG00000006123	LRPPRC	100	75.840	Heterocephalus_glaber_female
ENSMAUG00000012118	Lrpprc	63	76.139	ENSHGLG00100005960	-	100	76.139	Heterocephalus_glaber_male
ENSMAUG00000012118	Lrpprc	98	48.668	ENSHCOG00000002107	lrpprc	100	48.705	Hippocampus_comes
ENSMAUG00000012118	Lrpprc	99	50.769	ENSIPUG00000009406	lrpprc	96	50.535	Ictalurus_punctatus
ENSMAUG00000012118	Lrpprc	100	80.287	ENSSTOG00000011185	LRPPRC	100	80.072	Ictidomys_tridecemlineatus
ENSMAUG00000012118	Lrpprc	100	80.474	ENSJJAG00000020475	Lrpprc	100	80.330	Jaculus_jaculus
ENSMAUG00000012118	Lrpprc	99	48.030	ENSKMAG00000003287	lrpprc	83	47.750	Kryptolebias_marmoratus
ENSMAUG00000012118	Lrpprc	99	47.601	ENSLBEG00000023225	lrpprc	96	55.709	Labrus_bergylta
ENSMAUG00000012118	Lrpprc	100	59.386	ENSLACG00000014030	LRPPRC	99	59.202	Latimeria_chalumnae
ENSMAUG00000012118	Lrpprc	99	56.008	ENSLOCG00000016390	lrpprc	97	55.798	Lepisosteus_oculatus
ENSMAUG00000012118	Lrpprc	99	72.226	ENSLAFG00000008614	LRPPRC	99	72.226	Loxodonta_africana
ENSMAUG00000012118	Lrpprc	100	76.466	ENSMFAG00000041560	LRPPRC	100	87.500	Macaca_fascicularis
ENSMAUG00000012118	Lrpprc	99	75.036	ENSMMUG00000019841	LRPPRC	100	87.500	Macaca_mulatta
ENSMAUG00000012118	Lrpprc	100	76.681	ENSMNEG00000031613	LRPPRC	100	76.681	Macaca_nemestrina
ENSMAUG00000012118	Lrpprc	98	47.513	ENSMAMG00000021835	lrpprc	98	47.636	Mastacembelus_armatus
ENSMAUG00000012118	Lrpprc	99	51.515	ENSMZEG00005027379	lrpprc	99	50.526	Maylandia_zebra
ENSMAUG00000012118	Lrpprc	99	77.746	ENSMICG00000010486	LRPPRC	99	77.762	Microcebus_murinus
ENSMAUG00000012118	Lrpprc	100	87.356	ENSMOCG00000006048	Lrpprc	100	87.356	Microtus_ochrogaster
ENSMAUG00000012118	Lrpprc	96	56.200	ENSMMOG00000007830	lrpprc	99	55.075	Mola_mola
ENSMAUG00000012118	Lrpprc	99	65.678	ENSMODG00000000648	LRPPRC	99	66.518	Monodelphis_domestica
ENSMAUG00000012118	Lrpprc	99	50.148	ENSMALG00000001271	lrpprc	96	49.964	Monopterus_albus
ENSMAUG00000012118	Lrpprc	99	79.664	ENSMPUG00000011800	LRPPRC	99	79.664	Mustela_putorius_furo
ENSMAUG00000012118	Lrpprc	99	78.479	ENSMLUG00000010575	LRPPRC	99	78.479	Myotis_lucifugus
ENSMAUG00000012118	Lrpprc	100	82.615	ENSNGAG00000013069	Lrpprc	100	82.615	Nannospalax_galili
ENSMAUG00000012118	Lrpprc	97	48.663	ENSNBRG00000013202	lrpprc	99	56.335	Neolamprologus_brichardi
ENSMAUG00000012118	Lrpprc	100	75.681	ENSNLEG00000016782	LRPPRC	99	77.230	Nomascus_leucogenys
ENSMAUG00000012118	Lrpprc	92	80.645	ENSOPRG00000016774	LRPPRC	90	81.538	Ochotona_princeps
ENSMAUG00000012118	Lrpprc	100	77.387	ENSODEG00000011211	LRPPRC	100	77.387	Octodon_degus
ENSMAUG00000012118	Lrpprc	99	51.220	ENSONIG00000000917	lrpprc	99	50.391	Oreochromis_niloticus
ENSMAUG00000012118	Lrpprc	77	62.222	ENSOANG00000014670	-	99	62.630	Ornithorhynchus_anatinus
ENSMAUG00000012118	Lrpprc	99	78.751	ENSOCUG00000015046	LRPPRC	96	78.751	Oryctolagus_cuniculus
ENSMAUG00000012118	Lrpprc	99	49.699	ENSORLG00000004605	lrpprc	98	48.187	Oryzias_latipes
ENSMAUG00000012118	Lrpprc	95	51.395	ENSORLG00020012536	lrpprc	99	51.233	Oryzias_latipes_hni
ENSMAUG00000012118	Lrpprc	91	59.184	ENSORLG00015018270	lrpprc	95	59.184	Oryzias_latipes_hsok
ENSMAUG00000012118	Lrpprc	99	75.485	ENSOGAG00000012798	LRPPRC	99	75.485	Otolemur_garnettii
ENSMAUG00000012118	Lrpprc	99	78.623	ENSOARG00000006522	LRPPRC	99	78.623	Ovis_aries
ENSMAUG00000012118	Lrpprc	100	73.767	ENSPPAG00000040876	LRPPRC	99	74.858	Pan_paniscus
ENSMAUG00000012118	Lrpprc	99	79.253	ENSPPRG00000006578	LRPPRC	99	79.253	Panthera_pardus
ENSMAUG00000012118	Lrpprc	98	80.104	ENSPTIG00000000933	LRPPRC	97	79.823	Panthera_tigris_altaica
ENSMAUG00000012118	Lrpprc	100	76.327	ENSPTRG00000011880	LRPPRC	100	76.327	Pan_troglodytes
ENSMAUG00000012118	Lrpprc	100	76.466	ENSPANG00000020731	LRPPRC	99	76.281	Papio_anubis
ENSMAUG00000012118	Lrpprc	91	57.399	ENSPKIG00000022232	lrpprc	97	57.399	Paramormyrops_kingsleyae
ENSMAUG00000012118	Lrpprc	63	62.901	ENSPSIG00000006830	-	98	63.380	Pelodiscus_sinensis
ENSMAUG00000012118	Lrpprc	69	44.529	ENSPMGG00000016597	lrpprc	96	44.529	Periophthalmus_magnuspinnatus
ENSMAUG00000012118	Lrpprc	97	43.921	ENSPMAG00000002147	lrpprc	99	44.149	Petromyzon_marinus
ENSMAUG00000012118	Lrpprc	99	50.037	ENSPFOG00000011227	lrpprc	99	49.822	Poecilia_formosa
ENSMAUG00000012118	Lrpprc	99	49.963	ENSPLAG00000004018	lrpprc	99	49.505	Poecilia_latipinna
ENSMAUG00000012118	Lrpprc	99	50.112	ENSPMEG00000016425	lrpprc	99	49.646	Poecilia_mexicana
ENSMAUG00000012118	Lrpprc	99	50.112	ENSPREG00000003662	lrpprc	99	49.505	Poecilia_reticulata
ENSMAUG00000012118	Lrpprc	60	75.716	ENSPPYG00000029532	-	100	75.716	Pongo_abelii
ENSMAUG00000012118	Lrpprc	83	71.157	ENSPCAG00000001430	LRPPRC	84	71.157	Procavia_capensis
ENSMAUG00000012118	Lrpprc	99	75.951	ENSPVAG00000002007	LRPPRC	99	75.951	Pteropus_vampyrus
ENSMAUG00000012118	Lrpprc	98	49.810	ENSPNYG00000000756	lrpprc	91	57.660	Pundamilia_nyererei
ENSMAUG00000012118	Lrpprc	100	52.514	ENSPNAG00000002895	lrpprc	99	52.444	Pygocentrus_nattereri
ENSMAUG00000012118	Lrpprc	100	83.836	ENSRNOG00000005877	Lrpprc	100	83.836	Rattus_norvegicus
ENSMAUG00000012118	Lrpprc	100	74.324	ENSRBIG00000031552	LRPPRC	100	73.692	Rhinopithecus_bieti
ENSMAUG00000012118	Lrpprc	100	75.627	ENSSBOG00000011807	LRPPRC	100	75.699	Saimiri_boliviensis_boliviensis
ENSMAUG00000012118	Lrpprc	99	63.366	ENSSHAG00000018725	LRPPRC	99	64.190	Sarcophilus_harrisii
ENSMAUG00000012118	Lrpprc	99	50.392	ENSSFOG00015001042	lrpprc	99	50.452	Scleropages_formosus
ENSMAUG00000012118	Lrpprc	99	51.371	ENSSDUG00000019062	lrpprc	99	50.845	Seriola_dumerili
ENSMAUG00000012118	Lrpprc	99	44.687	ENSSLDG00000023028	lrpprc	99	43.692	Seriola_lalandi_dorsalis
ENSMAUG00000012118	Lrpprc	90	66.310	ENSSARG00000000426	LRPPRC	100	67.133	Sorex_araneus
ENSMAUG00000012118	Lrpprc	99	47.845	ENSSPAG00000000162	lrpprc	99	47.438	Stegastes_partitus
ENSMAUG00000012118	Lrpprc	99	78.551	ENSSSCG00000008452	LRPPRC	99	78.551	Sus_scrofa
ENSMAUG00000012118	Lrpprc	97	55.057	ENSTGUG00000003759	LRPPRC	100	55.209	Taeniopygia_guttata
ENSMAUG00000012118	Lrpprc	99	52.156	ENSTRUG00000008409	lrpprc	96	51.385	Takifugu_rubripes
ENSMAUG00000012118	Lrpprc	99	49.815	ENSTNIG00000007470	lrpprc	99	50.332	Tetraodon_nigroviridis
ENSMAUG00000012118	Lrpprc	99	76.184	ENSTTRG00000006403	LRPPRC	99	76.040	Tursiops_truncatus
ENSMAUG00000012118	Lrpprc	99	73.189	ENSVPAG00000008993	LRPPRC	99	73.939	Vicugna_pacos
ENSMAUG00000012118	Lrpprc	99	59.317	ENSXETG00000009296	lrpprc	99	59.127	Xenopus_tropicalis
ENSMAUG00000012118	Lrpprc	98	48.224	ENSXCOG00000013343	lrpprc	95	53.094	Xiphophorus_couchianus
ENSMAUG00000012118	Lrpprc	99	50.219	ENSXMAG00000018108	lrpprc	99	49.471	Xiphophorus_maculatus