EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000012185 (Gene tree)
Gene ID: 101842157
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 23732 bases
Position: chrKB708163.1:166389-190120
Accession: 101842157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000011673	CSD	PF00313.22	1.4e-26	1	1
ENSMAUP00000011681	CSD	PF00313.22	1.7e-26	1	1
ENSMAUP00000011683	CSD	PF00313.22	2.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000015572	-	753	-	ENSMAUP00000011683	250 (aa)	-	-
ENSMAUT00000015570	-	1041	-	ENSMAUP00000011681	346 (aa)	-	-
ENSMAUT00000015562	-	1543	XM_005072954	ENSMAUP00000011673	319 (aa)	XP_021084500	-

Gene Model

Click here to download ENSMAUG00000012185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000012185	Ybx3	64	65.476	ENSMAUG00000016728	-	80	54.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012185	Ybx3	98	86.293	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSMAUG00000012185	Ybx3	98	89.557	ENSAMEG00000009393	YBX3	91	90.654	Ailuropoda_melanoleuca
ENSMAUG00000012185	Ybx3	85	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSMAUG00000012185	Ybx3	92	90.847	ENSANAG00000024492	-	100	89.557	Aotus_nancymaae
ENSMAUG00000012185	Ybx3	89	65.801	ENSANAG00000033366	-	77	78.049	Aotus_nancymaae
ENSMAUG00000012185	Ybx3	98	89.905	ENSBTAG00000009663	YBX3	85	87.267	Bos_taurus
ENSMAUG00000012185	Ybx3	99	66.400	ENSCJAG00000033824	-	88	82.278	Callithrix_jacchus
ENSMAUG00000012185	Ybx3	92	90.508	ENSCJAG00000021660	-	93	84.393	Callithrix_jacchus
ENSMAUG00000012185	Ybx3	89	92.683	ENSCAFG00000013401	YBX3	100	92.627	Canis_familiaris
ENSMAUG00000012185	Ybx3	91	89.726	ENSCAFG00020006412	YBX3	87	87.692	Canis_lupus_dingo
ENSMAUG00000012185	Ybx3	98	89.905	ENSCHIG00000010863	YBX3	90	90.062	Capra_hircus
ENSMAUG00000012185	Ybx3	89	92.683	ENSTSYG00000004204	-	96	87.937	Carlito_syrichta
ENSMAUG00000012185	Ybx3	100	75.889	ENSTSYG00000035821	-	72	96.809	Carlito_syrichta
ENSMAUG00000012185	Ybx3	89	88.462	ENSCAPG00000015039	YBX3	93	88.462	Cavia_aperea
ENSMAUG00000012185	Ybx3	91	89.041	ENSCPOG00000011329	YBX3	94	86.435	Cavia_porcellus
ENSMAUG00000012185	Ybx3	92	90.169	ENSCCAG00000016469	YBX3	88	88.650	Cebus_capucinus
ENSMAUG00000012185	Ybx3	98	85.670	ENSCATG00000034411	YBX3	88	88.073	Cercocebus_atys
ENSMAUG00000012185	Ybx3	89	89.860	ENSCLAG00000016030	YBX3	94	89.860	Chinchilla_lanigera
ENSMAUG00000012185	Ybx3	98	85.981	ENSCSAG00000008744	YBX3	88	88.379	Chlorocebus_sabaeus
ENSMAUG00000012185	Ybx3	79	100.000	ENSCHOG00000011988	YBX3	54	100.000	Choloepus_hoffmanni
ENSMAUG00000012185	Ybx3	88	83.710	ENSCPBG00000014147	YBX3	90	77.090	Chrysemys_picta_bellii
ENSMAUG00000012185	Ybx3	66	59.884	ENSCING00000010654	yb1/2/3	56	62.025	Ciona_intestinalis
ENSMAUG00000012185	Ybx3	92	90.169	ENSCANG00000036801	YBX3	100	88.889	Colobus_angolensis_palliatus
ENSMAUG00000012185	Ybx3	100	99.373	ENSCGRG00001016148	Ybx3	88	99.373	Cricetulus_griseus_chok1gshd
ENSMAUG00000012185	Ybx3	89	97.924	ENSCGRG00000004563	Ybx3	98	97.924	Cricetulus_griseus_crigri
ENSMAUG00000012185	Ybx3	98	85.032	ENSDORG00000009103	Ybx3	95	80.115	Dipodomys_ordii
ENSMAUG00000012185	Ybx3	88	84.266	ENSETEG00000002557	YBX3	99	82.746	Echinops_telfairi
ENSMAUG00000012185	Ybx3	98	83.125	ENSEASG00005014726	YBX3	88	85.538	Equus_asinus_asinus
ENSMAUG00000012185	Ybx3	98	86.562	ENSECAG00000013777	YBX3	88	88.923	Equus_caballus
ENSMAUG00000012185	Ybx3	88	90.141	ENSEEUG00000010415	YBX3	100	91.549	Erinaceus_europaeus
ENSMAUG00000012185	Ybx3	98	86.916	ENSFCAG00000027748	YBX3	87	90.798	Felis_catus
ENSMAUG00000012185	Ybx3	85	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSMAUG00000012185	Ybx3	78	100.000	ENSFDAG00000021192	YBX3	92	86.014	Fukomys_damarensis
ENSMAUG00000012185	Ybx3	87	83.562	ENSGALG00000031890	YBX3	78	86.087	Gallus_gallus
ENSMAUG00000012185	Ybx3	100	75.466	ENSGAGG00000017780	YBX3	87	78.968	Gopherus_agassizii
ENSMAUG00000012185	Ybx3	98	86.293	ENSGGOG00000001352	YBX3	88	88.685	Gorilla_gorilla
ENSMAUG00000012185	Ybx3	94	78.289	ENSHGLG00000014798	-	93	79.495	Heterocephalus_glaber_female
ENSMAUG00000012185	Ybx3	85	79.779	ENSHGLG00000015495	-	90	77.558	Heterocephalus_glaber_female
ENSMAUG00000012185	Ybx3	86	92.202	ENSHGLG00100003589	YBX3	87	92.202	Heterocephalus_glaber_male
ENSMAUG00000012185	Ybx3	89	86.972	ENSSTOG00000002108	-	88	86.972	Ictidomys_tridecemlineatus
ENSMAUG00000012185	Ybx3	97	84.984	ENSSTOG00000032577	-	90	85.358	Ictidomys_tridecemlineatus
ENSMAUG00000012185	Ybx3	92	70.748	ENSJJAG00000014239	Ybx3	100	83.333	Jaculus_jaculus
ENSMAUG00000012185	Ybx3	92	93.197	ENSLAFG00000017247	YBX3	95	85.938	Loxodonta_africana
ENSMAUG00000012185	Ybx3	98	85.981	ENSMFAG00000039369	YBX3	88	88.379	Macaca_fascicularis
ENSMAUG00000012185	Ybx3	99	85.846	ENSMMUG00000022469	YBX3	100	88.308	Macaca_mulatta
ENSMAUG00000012185	Ybx3	98	85.981	ENSMNEG00000045109	YBX3	88	88.344	Macaca_nemestrina
ENSMAUG00000012185	Ybx3	89	91.259	ENSMLEG00000033618	YBX3	93	82.121	Mandrillus_leucophaeus
ENSMAUG00000012185	Ybx3	84	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSMAUG00000012185	Ybx3	91	94.178	ENSMICG00000038002	-	88	92.000	Microcebus_murinus
ENSMAUG00000012185	Ybx3	100	77.381	ENSMICG00000031459	-	89	80.337	Microcebus_murinus
ENSMAUG00000012185	Ybx3	97	97.087	ENSMOCG00000016291	Ybx3	100	98.723	Microtus_ochrogaster
ENSMAUG00000012185	Ybx3	90	82.818	ENSMODG00000018248	YBX3	93	82.818	Monodelphis_domestica
ENSMAUG00000012185	Ybx3	100	97.200	MGP_CAROLIEiJ_G0028947	Ybx3	88	97.179	Mus_caroli
ENSMAUG00000012185	Ybx3	100	97.179	ENSMUSG00000030189	Ybx3	88	97.179	Mus_musculus
ENSMAUG00000012185	Ybx3	100	97.806	MGP_PahariEiJ_G0022709	Ybx3	88	97.806	Mus_pahari
ENSMAUG00000012185	Ybx3	100	97.492	MGP_SPRETEiJ_G0029994	Ybx3	88	97.492	Mus_spretus
ENSMAUG00000012185	Ybx3	98	70.213	ENSMPUG00000011810	YBX3	88	75.150	Mustela_putorius_furo
ENSMAUG00000012185	Ybx3	82	90.335	ENSMLUG00000007476	YBX3	100	90.335	Myotis_lucifugus
ENSMAUG00000012185	Ybx3	92	88.776	ENSNGAG00000000710	Ybx3	100	85.772	Nannospalax_galili
ENSMAUG00000012185	Ybx3	98	83.801	ENSNLEG00000034844	YBX3	93	85.015	Nomascus_leucogenys
ENSMAUG00000012185	Ybx3	54	78.035	ENSMEUG00000002507	-	81	78.035	Notamacropus_eugenii
ENSMAUG00000012185	Ybx3	98	81.505	ENSODEG00000017957	YBX3	94	83.386	Octodon_degus
ENSMAUG00000012185	Ybx3	92	87.755	ENSOCUG00000001889	YBX3	94	83.901	Oryctolagus_cuniculus
ENSMAUG00000012185	Ybx3	88	97.345	ENSOGAG00000013245	YBX3	88	89.157	Otolemur_garnettii
ENSMAUG00000012185	Ybx3	82	97.938	ENSOARG00000020919	YBX3	99	81.605	Ovis_aries
ENSMAUG00000012185	Ybx3	91	90.444	ENSPPAG00000039068	YBX3	82	91.892	Pan_paniscus
ENSMAUG00000012185	Ybx3	98	87.227	ENSPPRG00000005859	YBX3	87	91.104	Panthera_pardus
ENSMAUG00000012185	Ybx3	88	93.310	ENSPTIG00000005322	YBX3	81	93.007	Panthera_tigris_altaica
ENSMAUG00000012185	Ybx3	98	86.293	ENSPTRG00000004681	YBX3	87	88.685	Pan_troglodytes
ENSMAUG00000012185	Ybx3	98	85.670	ENSPANG00000010280	YBX3	88	88.073	Papio_anubis
ENSMAUG00000012185	Ybx3	85	84.651	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSMAUG00000012185	Ybx3	99	98.418	ENSPEMG00000012132	-	100	98.418	Peromyscus_maniculatus_bairdii
ENSMAUG00000012185	Ybx3	96	97.510	ENSPEMG00000010391	-	92	97.510	Peromyscus_maniculatus_bairdii
ENSMAUG00000012185	Ybx3	80	81.467	ENSPCIG00000029949	YBX3	100	81.467	Phascolarctos_cinereus
ENSMAUG00000012185	Ybx3	98	85.981	ENSPPYG00000004279	YBX3	88	88.379	Pongo_abelii
ENSMAUG00000012185	Ybx3	67	93.488	ENSPCAG00000001397	YBX3	85	90.244	Procavia_capensis
ENSMAUG00000012185	Ybx3	66	87.383	ENSPCOG00000011663	YBX3	82	87.383	Propithecus_coquereli
ENSMAUG00000012185	Ybx3	93	78.667	ENSPVAG00000006740	YBX3	93	74.499	Pteropus_vampyrus
ENSMAUG00000012185	Ybx3	100	98.433	ENSRNOG00000005480	Ybx3	88	98.433	Rattus_norvegicus
ENSMAUG00000012185	Ybx3	91	90.102	ENSRBIG00000039208	YBX3	88	87.768	Rhinopithecus_bieti
ENSMAUG00000012185	Ybx3	98	85.981	ENSRROG00000029638	YBX3	88	88.379	Rhinopithecus_roxellana
ENSMAUG00000012185	Ybx3	90	91.349	ENSSBOG00000030573	YBX3	97	82.371	Saimiri_boliviensis_boliviensis
ENSMAUG00000012185	Ybx3	78	98.837	ENSSHAG00000003262	YBX3	98	82.474	Sarcophilus_harrisii
ENSMAUG00000012185	Ybx3	55	89.928	ENSSPUG00000009911	-	80	82.659	Sphenodon_punctatus
ENSMAUG00000012185	Ybx3	98	86.728	ENSSSCG00000000633	YBX3	91	86.494	Sus_scrofa
ENSMAUG00000012185	Ybx3	84	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSMAUG00000012185	Ybx3	99	84.356	ENSTBEG00000012570	YBX3	90	85.583	Tupaia_belangeri
ENSMAUG00000012185	Ybx3	82	83.083	ENSTTRG00000008045	YBX3	100	84.211	Tursiops_truncatus
ENSMAUG00000012185	Ybx3	86	89.892	ENSUAMG00000016662	YBX3	100	89.892	Ursus_americanus
ENSMAUG00000012185	Ybx3	88	93.310	ENSUMAG00000016118	YBX3	94	93.007	Ursus_maritimus
ENSMAUG00000012185	Ybx3	68	100.000	ENSVPAG00000000876	YBX3	100	70.423	Vicugna_pacos
ENSMAUG00000012185	Ybx3	86	89.170	ENSVVUG00000004956	YBX3	100	89.170	Vulpes_vulpes
ENSMAUG00000012185	Ybx3	86	72.727	ENSXETG00000016239	ybx3	86	83.810	Xenopus_tropicalis