EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000012243 (Gene tree)
Gene ID: 101838894
Gene Symbol: -
Alias: -
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 8972 bases
Position: chrKB708127.1:5296731-5305702
Accession: 101838894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000011736	SMN	PF06003.12	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000015628	-	1811	XM_005063463	ENSMAUP00000011736	238 (aa)	XP_005063520	A0A1U7Q2M9

Gene Model

Click here to download ENSMAUG00000012243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000012243	-	99	80.591	ENSMAUG00000005459	-	93	80.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012243	-	100	99.580	ENSG00000119953	SMNDC1	100	99.580	Homo_sapiens
ENSMAUG00000012243	-	100	74.790	ENSAPOG00000021772	smndc1	100	74.790	Acanthochromis_polyacanthus
ENSMAUG00000012243	-	100	100.000	ENSAMEG00000005251	SMNDC1	100	100.000	Ailuropoda_melanoleuca
ENSMAUG00000012243	-	100	77.406	ENSACIG00000004819	smndc1	100	77.406	Amphilophus_citrinellus
ENSMAUG00000012243	-	100	74.790	ENSAOCG00000017869	smndc1	100	74.790	Amphiprion_ocellaris
ENSMAUG00000012243	-	100	74.790	ENSAPEG00000007752	smndc1	100	74.790	Amphiprion_percula
ENSMAUG00000012243	-	100	76.050	ENSATEG00000006830	smndc1	100	76.050	Anabas_testudineus
ENSMAUG00000012243	-	83	96.465	ENSAPLG00000004322	SMNDC1	100	96.465	Anas_platyrhynchos
ENSMAUG00000012243	-	100	94.958	ENSACAG00000005983	SMNDC1	100	94.958	Anolis_carolinensis
ENSMAUG00000012243	-	100	100.000	ENSANAG00000032875	SMNDC1	100	100.000	Aotus_nancymaae
ENSMAUG00000012243	-	100	76.471	ENSACLG00000016360	smndc1	100	76.471	Astatotilapia_calliptera
ENSMAUG00000012243	-	100	76.050	ENSAMXG00000020310	smndc1	100	76.050	Astyanax_mexicanus
ENSMAUG00000012243	-	100	99.580	ENSBTAG00000000551	SMNDC1	100	99.580	Bos_taurus
ENSMAUG00000012243	-	100	100.000	ENSCJAG00000018624	SMNDC1	100	100.000	Callithrix_jacchus
ENSMAUG00000012243	-	100	100.000	ENSCAFG00000010720	SMNDC1	100	100.000	Canis_familiaris
ENSMAUG00000012243	-	100	100.000	ENSCAFG00020011913	SMNDC1	100	100.000	Canis_lupus_dingo
ENSMAUG00000012243	-	100	99.580	ENSCHIG00000010604	SMNDC1	100	99.580	Capra_hircus
ENSMAUG00000012243	-	100	99.580	ENSTSYG00000026454	SMNDC1	100	99.580	Carlito_syrichta
ENSMAUG00000012243	-	100	84.167	ENSCAPG00000009132	SMNDC1	100	99.005	Cavia_aperea
ENSMAUG00000012243	-	100	99.160	ENSCPOG00000031666	SMNDC1	100	99.160	Cavia_porcellus
ENSMAUG00000012243	-	100	100.000	ENSCCAG00000021793	SMNDC1	100	100.000	Cebus_capucinus
ENSMAUG00000012243	-	100	99.580	ENSCATG00000035910	SMNDC1	100	99.580	Cercocebus_atys
ENSMAUG00000012243	-	100	98.739	ENSCLAG00000002838	SMNDC1	100	98.739	Chinchilla_lanigera
ENSMAUG00000012243	-	100	100.000	ENSCSAG00000005169	SMNDC1	100	100.000	Chlorocebus_sabaeus
ENSMAUG00000012243	-	81	99.482	ENSCHOG00000002936	SMNDC1	100	99.482	Choloepus_hoffmanni
ENSMAUG00000012243	-	100	97.899	ENSCPBG00000012837	SMNDC1	100	97.899	Chrysemys_picta_bellii
ENSMAUG00000012243	-	100	100.000	ENSCANG00000031720	-	100	100.000	Colobus_angolensis_palliatus
ENSMAUG00000012243	-	100	78.992	ENSCANG00000036994	-	100	78.992	Colobus_angolensis_palliatus
ENSMAUG00000012243	-	100	92.017	ENSCANG00000034620	-	100	92.017	Colobus_angolensis_palliatus
ENSMAUG00000012243	-	100	99.160	ENSCGRG00001012973	Smndc1	100	99.160	Cricetulus_griseus_chok1gshd
ENSMAUG00000012243	-	100	99.160	ENSCGRG00000012396	Smndc1	100	99.160	Cricetulus_griseus_crigri
ENSMAUG00000012243	-	100	75.630	ENSCSEG00000015621	smndc1	100	75.630	Cynoglossus_semilaevis
ENSMAUG00000012243	-	100	76.471	ENSCVAG00000020432	smndc1	100	76.471	Cyprinodon_variegatus
ENSMAUG00000012243	-	100	78.992	ENSDARG00000056235	smndc1	100	78.992	Danio_rerio
ENSMAUG00000012243	-	100	100.000	ENSDNOG00000016387	SMNDC1	83	100.000	Dasypus_novemcinctus
ENSMAUG00000012243	-	100	100.000	ENSDORG00000023715	Smndc1	100	100.000	Dipodomys_ordii
ENSMAUG00000012243	-	95	41.767	FBgn0039977	CG17454	98	42.972	Drosophila_melanogaster
ENSMAUG00000012243	-	100	70.954	ENSEBUG00000010929	smndc1	100	70.954	Eptatretus_burgeri
ENSMAUG00000012243	-	100	100.000	ENSEASG00005014930	SMNDC1	100	100.000	Equus_asinus_asinus
ENSMAUG00000012243	-	100	100.000	ENSECAG00000029973	SMNDC1	100	100.000	Equus_caballus
ENSMAUG00000012243	-	83	70.202	ENSEEUG00000013407	-	100	70.202	Erinaceus_europaeus
ENSMAUG00000012243	-	100	77.731	ENSELUG00000000227	smndc1	100	77.731	Esox_lucius
ENSMAUG00000012243	-	100	100.000	ENSFCAG00000027353	SMNDC1	100	100.000	Felis_catus
ENSMAUG00000012243	-	100	96.218	ENSFALG00000002306	SMNDC1	100	96.218	Ficedula_albicollis
ENSMAUG00000012243	-	100	98.739	ENSFDAG00000006468	SMNDC1	100	98.739	Fukomys_damarensis
ENSMAUG00000012243	-	100	76.050	ENSFHEG00000020150	smndc1	100	76.050	Fundulus_heteroclitus
ENSMAUG00000012243	-	100	76.471	ENSGMOG00000016585	smndc1	100	76.471	Gadus_morhua
ENSMAUG00000012243	-	100	96.218	ENSGALG00000008561	SMNDC1	100	96.218	Gallus_gallus
ENSMAUG00000012243	-	100	75.210	ENSGAFG00000011582	smndc1	100	75.210	Gambusia_affinis
ENSMAUG00000012243	-	100	75.630	ENSGACG00000009468	smndc1	100	75.630	Gasterosteus_aculeatus
ENSMAUG00000012243	-	100	97.899	ENSGAGG00000024547	SMNDC1	100	97.899	Gopherus_agassizii
ENSMAUG00000012243	-	100	100.000	ENSGGOG00000010071	SMNDC1	100	100.000	Gorilla_gorilla
ENSMAUG00000012243	-	100	76.471	ENSHBUG00000017596	smndc1	100	76.471	Haplochromis_burtoni
ENSMAUG00000012243	-	100	98.739	ENSHGLG00000013390	-	100	98.739	Heterocephalus_glaber_female
ENSMAUG00000012243	-	100	68.852	ENSHGLG00000001157	-	100	65.714	Heterocephalus_glaber_female
ENSMAUG00000012243	-	100	98.739	ENSHGLG00100004814	-	100	98.739	Heterocephalus_glaber_male
ENSMAUG00000012243	-	100	77.049	ENSHGLG00100004278	-	100	76.639	Heterocephalus_glaber_male
ENSMAUG00000012243	-	100	74.895	ENSHCOG00000000783	smndc1	100	74.895	Hippocampus_comes
ENSMAUG00000012243	-	100	77.311	ENSIPUG00000004217	smndc1	100	77.311	Ictalurus_punctatus
ENSMAUG00000012243	-	100	99.580	ENSSTOG00000006088	SMNDC1	100	99.580	Ictidomys_tridecemlineatus
ENSMAUG00000012243	-	100	99.160	ENSJJAG00000019974	Smndc1	100	99.160	Jaculus_jaculus
ENSMAUG00000012243	-	100	75.210	ENSKMAG00000020134	smndc1	100	75.210	Kryptolebias_marmoratus
ENSMAUG00000012243	-	100	74.790	ENSLBEG00000004598	smndc1	100	74.790	Labrus_bergylta
ENSMAUG00000012243	-	100	84.034	ENSLACG00000007784	SMNDC1	100	84.034	Latimeria_chalumnae
ENSMAUG00000012243	-	100	84.034	ENSLOCG00000012355	smndc1	100	84.034	Lepisosteus_oculatus
ENSMAUG00000012243	-	100	99.580	ENSLAFG00000014353	SMNDC1	100	99.580	Loxodonta_africana
ENSMAUG00000012243	-	100	81.933	ENSMFAG00000038381	-	100	81.933	Macaca_fascicularis
ENSMAUG00000012243	-	100	100.000	ENSMFAG00000002433	-	100	100.000	Macaca_fascicularis
ENSMAUG00000012243	-	100	100.000	ENSMMUG00000007775	SMNDC1	100	100.000	Macaca_mulatta
ENSMAUG00000012243	-	100	81.933	ENSMMUG00000045875	-	100	81.933	Macaca_mulatta
ENSMAUG00000012243	-	100	88.235	ENSMNEG00000033853	-	100	88.235	Macaca_nemestrina
ENSMAUG00000012243	-	100	100.000	ENSMNEG00000042963	-	100	100.000	Macaca_nemestrina
ENSMAUG00000012243	-	100	93.724	ENSMLEG00000040236	SMNDC1	100	93.305	Mandrillus_leucophaeus
ENSMAUG00000012243	-	89	73.239	ENSMAMG00000018233	smndc1	87	73.239	Mastacembelus_armatus
ENSMAUG00000012243	-	100	76.471	ENSMZEG00005027510	smndc1	100	76.471	Maylandia_zebra
ENSMAUG00000012243	-	84	96.000	ENSMGAG00000010777	SMNDC1	84	96.000	Meleagris_gallopavo
ENSMAUG00000012243	-	100	86.134	ENSMICG00000031640	-	100	86.134	Microcebus_murinus
ENSMAUG00000012243	-	100	99.160	ENSMICG00000027336	-	100	99.160	Microcebus_murinus
ENSMAUG00000012243	-	100	99.580	ENSMOCG00000002458	Smndc1	100	99.580	Microtus_ochrogaster
ENSMAUG00000012243	-	100	76.050	ENSMMOG00000008856	smndc1	100	76.050	Mola_mola
ENSMAUG00000012243	-	100	99.160	ENSMODG00000010542	SMNDC1	100	99.160	Monodelphis_domestica
ENSMAUG00000012243	-	100	76.471	ENSMALG00000017598	smndc1	100	76.471	Monopterus_albus
ENSMAUG00000012243	-	100	98.739	MGP_CAROLIEiJ_G0023072	Smndc1	100	98.739	Mus_caroli
ENSMAUG00000012243	-	100	99.160	ENSMUSG00000025024	Smndc1	100	99.160	Mus_musculus
ENSMAUG00000012243	-	100	98.739	MGP_PahariEiJ_G0014560	Smndc1	100	98.739	Mus_pahari
ENSMAUG00000012243	-	100	99.160	MGP_SPRETEiJ_G0023993	Smndc1	100	99.160	Mus_spretus
ENSMAUG00000012243	-	100	100.000	ENSMPUG00000002089	SMNDC1	100	100.000	Mustela_putorius_furo
ENSMAUG00000012243	-	100	98.739	ENSMLUG00000016007	SMNDC1	100	98.739	Myotis_lucifugus
ENSMAUG00000012243	-	100	99.160	ENSNGAG00000006833	Smndc1	100	99.160	Nannospalax_galili
ENSMAUG00000012243	-	100	76.050	ENSNBRG00000017089	smndc1	100	76.050	Neolamprologus_brichardi
ENSMAUG00000012243	-	100	100.000	ENSNLEG00000015471	SMNDC1	100	100.000	Nomascus_leucogenys
ENSMAUG00000012243	-	82	58.000	ENSMEUG00000010120	-	99	58.500	Notamacropus_eugenii
ENSMAUG00000012243	-	100	99.160	ENSOPRG00000015348	SMNDC1	100	99.160	Ochotona_princeps
ENSMAUG00000012243	-	100	69.328	ENSODEG00000007594	-	100	66.387	Octodon_degus
ENSMAUG00000012243	-	100	76.050	ENSONIG00000000434	smndc1	100	76.050	Oreochromis_niloticus
ENSMAUG00000012243	-	100	97.899	ENSOANG00000001598	SMNDC1	100	97.899	Ornithorhynchus_anatinus
ENSMAUG00000012243	-	100	75.630	ENSOCUG00000012274	-	100	77.311	Oryctolagus_cuniculus
ENSMAUG00000012243	-	100	99.160	ENSOCUG00000008145	-	100	99.160	Oryctolagus_cuniculus
ENSMAUG00000012243	-	100	76.050	ENSORLG00000005934	smndc1	95	76.050	Oryzias_latipes
ENSMAUG00000012243	-	100	76.050	ENSORLG00020008796	smndc1	95	76.050	Oryzias_latipes_hni
ENSMAUG00000012243	-	100	76.050	ENSORLG00015013666	smndc1	100	76.050	Oryzias_latipes_hsok
ENSMAUG00000012243	-	100	77.731	ENSOMEG00000007590	smndc1	100	77.731	Oryzias_melastigma
ENSMAUG00000012243	-	100	99.580	ENSOGAG00000000571	SMNDC1	100	99.580	Otolemur_garnettii
ENSMAUG00000012243	-	100	99.580	ENSOARG00000009500	SMNDC1	100	99.580	Ovis_aries
ENSMAUG00000012243	-	100	100.000	ENSPPAG00000027815	SMNDC1	100	100.000	Pan_paniscus
ENSMAUG00000012243	-	100	100.000	ENSPPRG00000013749	SMNDC1	100	100.000	Panthera_pardus
ENSMAUG00000012243	-	100	100.000	ENSPTIG00000011451	SMNDC1	100	100.000	Panthera_tigris_altaica
ENSMAUG00000012243	-	100	100.000	ENSPTRG00000002937	SMNDC1	100	100.000	Pan_troglodytes
ENSMAUG00000012243	-	100	100.000	ENSPANG00000020805	-	100	100.000	Papio_anubis
ENSMAUG00000012243	-	100	94.118	ENSPANG00000031346	-	100	94.118	Papio_anubis
ENSMAUG00000012243	-	100	80.672	ENSPKIG00000017164	smndc1	100	80.672	Paramormyrops_kingsleyae
ENSMAUG00000012243	-	100	97.479	ENSPSIG00000012257	SMNDC1	100	97.479	Pelodiscus_sinensis
ENSMAUG00000012243	-	100	73.529	ENSPMGG00000015651	smndc1	100	73.529	Periophthalmus_magnuspinnatus
ENSMAUG00000012243	-	100	100.000	ENSPEMG00000022058	Smndc1	100	100.000	Peromyscus_maniculatus_bairdii
ENSMAUG00000012243	-	100	67.623	ENSPMAG00000007705	smndc1	100	68.033	Petromyzon_marinus
ENSMAUG00000012243	-	97	63.043	ENSPCIG00000009693	-	100	63.043	Phascolarctos_cinereus
ENSMAUG00000012243	-	100	99.160	ENSPCIG00000018419	SMNDC1	100	99.160	Phascolarctos_cinereus
ENSMAUG00000012243	-	100	75.630	ENSPFOG00000017113	smndc1	100	75.630	Poecilia_formosa
ENSMAUG00000012243	-	100	76.050	ENSPLAG00000010372	smndc1	100	76.050	Poecilia_latipinna
ENSMAUG00000012243	-	100	76.050	ENSPMEG00000012288	smndc1	100	76.050	Poecilia_mexicana
ENSMAUG00000012243	-	100	75.210	ENSPREG00000012279	smndc1	100	75.210	Poecilia_reticulata
ENSMAUG00000012243	-	100	100.000	ENSPPYG00000002643	SMNDC1	100	100.000	Pongo_abelii
ENSMAUG00000012243	-	81	98.446	ENSPCAG00000016183	SMNDC1	100	98.446	Procavia_capensis
ENSMAUG00000012243	-	100	99.580	ENSPCOG00000024343	SMNDC1	100	99.580	Propithecus_coquereli
ENSMAUG00000012243	-	100	76.050	ENSPVAG00000004368	SMNDC1	100	76.050	Pteropus_vampyrus
ENSMAUG00000012243	-	92	70.222	ENSPNYG00000024093	smndc1	98	70.222	Pundamilia_nyererei
ENSMAUG00000012243	-	100	76.471	ENSPNAG00000025285	smndc1	100	76.471	Pygocentrus_nattereri
ENSMAUG00000012243	-	100	98.739	ENSRNOG00000014833	Smndc1	100	98.739	Rattus_norvegicus
ENSMAUG00000012243	-	100	99.580	ENSRBIG00000000224	-	100	99.580	Rhinopithecus_bieti
ENSMAUG00000012243	-	100	83.613	ENSRBIG00000032452	-	100	83.613	Rhinopithecus_bieti
ENSMAUG00000012243	-	100	100.000	ENSRROG00000044992	-	100	100.000	Rhinopithecus_roxellana
ENSMAUG00000012243	-	100	84.034	ENSRROG00000039125	-	100	84.034	Rhinopithecus_roxellana
ENSMAUG00000012243	-	100	100.000	ENSSBOG00000026789	SMNDC1	100	100.000	Saimiri_boliviensis_boliviensis
ENSMAUG00000012243	-	100	99.160	ENSSHAG00000015189	SMNDC1	100	99.160	Sarcophilus_harrisii
ENSMAUG00000012243	-	100	79.832	ENSSFOG00015008311	smndc1	100	79.832	Scleropages_formosus
ENSMAUG00000012243	-	100	76.050	ENSSMAG00000020118	smndc1	100	76.050	Scophthalmus_maximus
ENSMAUG00000012243	-	100	76.471	ENSSDUG00000015330	smndc1	100	76.471	Seriola_dumerili
ENSMAUG00000012243	-	100	76.471	ENSSLDG00000017325	smndc1	100	76.471	Seriola_lalandi_dorsalis
ENSMAUG00000012243	-	100	98.739	ENSSARG00000006063	SMNDC1	100	98.739	Sorex_araneus
ENSMAUG00000012243	-	100	96.218	ENSSPUG00000004574	SMNDC1	100	96.218	Sphenodon_punctatus
ENSMAUG00000012243	-	100	74.370	ENSSPAG00000000338	smndc1	100	74.370	Stegastes_partitus
ENSMAUG00000012243	-	100	99.580	ENSSSCG00000030507	SMNDC1	100	99.580	Sus_scrofa
ENSMAUG00000012243	-	100	96.218	ENSTGUG00000010599	SMNDC1	100	96.218	Taeniopygia_guttata
ENSMAUG00000012243	-	100	73.950	ENSTRUG00000023281	smndc1	100	73.950	Takifugu_rubripes
ENSMAUG00000012243	-	100	74.790	ENSTNIG00000013331	smndc1	100	74.790	Tetraodon_nigroviridis
ENSMAUG00000012243	-	100	99.580	ENSTBEG00000014337	SMNDC1	100	99.580	Tupaia_belangeri
ENSMAUG00000012243	-	100	100.000	ENSUAMG00000008142	SMNDC1	100	100.000	Ursus_americanus
ENSMAUG00000012243	-	100	100.000	ENSUMAG00000023722	SMNDC1	100	100.000	Ursus_maritimus
ENSMAUG00000012243	-	83	99.495	ENSVPAG00000003402	SMNDC1	100	99.495	Vicugna_pacos
ENSMAUG00000012243	-	100	100.000	ENSVVUG00000007820	SMNDC1	100	100.000	Vulpes_vulpes
ENSMAUG00000012243	-	60	81.690	ENSXETG00000015415	SMNDC1	100	81.690	Xenopus_tropicalis
ENSMAUG00000012243	-	100	75.210	ENSXCOG00000009159	smndc1	100	75.210	Xiphophorus_couchianus
ENSMAUG00000012243	-	100	74.790	ENSXMAG00000012755	smndc1	100	74.790	Xiphophorus_maculatus