EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000012298 (Gene tree)
Gene ID: 101838905
Gene Symbol: Pnldc1
Alias: LOC240023
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 12343 bases
Position: chrKB708131.1:30472456-30484798
Accession: 101838905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000011823	CAF1	PF04857.20	1.3e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000015720	-	1410	XM_005065762	ENSMAUP00000011823	470 (aa)	XP_005065819	-

Gene Model

Click here to download ENSMAUG00000012298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000012298	Pnldc1	68	30.769	ENSMAUG00000008025	Parn	52	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012298	Pnldc1	100	66.917	ENSG00000146453	PNLDC1	99	66.917	Homo_sapiens
ENSMAUG00000012298	Pnldc1	100	65.283	ENSAMEG00000015371	PNLDC1	99	65.283	Ailuropoda_melanoleuca
ENSMAUG00000012298	Pnldc1	54	35.443	ENSAPEG00000010661	parn	51	35.443	Amphiprion_percula
ENSMAUG00000012298	Pnldc1	68	34.247	ENSAPLG00000013914	PARN	51	34.752	Anas_platyrhynchos
ENSMAUG00000012298	Pnldc1	95	49.016	ENSAPLG00000007014	PNLDC1	97	49.016	Anas_platyrhynchos
ENSMAUG00000012298	Pnldc1	99	51.229	ENSACAG00000013667	PNLDC1	99	51.229	Anolis_carolinensis
ENSMAUG00000012298	Pnldc1	100	67.293	ENSANAG00000034713	PNLDC1	100	67.379	Aotus_nancymaae
ENSMAUG00000012298	Pnldc1	68	34.247	ENSAMXG00000012390	parn	52	34.247	Astyanax_mexicanus
ENSMAUG00000012298	Pnldc1	95	67.061	ENSBTAG00000015166	PNLDC1	95	67.061	Bos_taurus
ENSMAUG00000012298	Pnldc1	100	67.170	ENSCJAG00000011865	PNLDC1	99	67.589	Callithrix_jacchus
ENSMAUG00000012298	Pnldc1	100	65.913	ENSCAFG00000000740	PNLDC1	99	65.913	Canis_familiaris
ENSMAUG00000012298	Pnldc1	68	35.616	ENSCAFG00000018795	PARN	52	35.616	Canis_familiaris
ENSMAUG00000012298	Pnldc1	100	64.098	ENSCAFG00020017742	PNLDC1	99	64.098	Canis_lupus_dingo
ENSMAUG00000012298	Pnldc1	68	35.616	ENSCAFG00020024126	PARN	52	35.616	Canis_lupus_dingo
ENSMAUG00000012298	Pnldc1	99	65.103	ENSCHIG00000003141	PNLDC1	99	65.103	Capra_hircus
ENSMAUG00000012298	Pnldc1	100	64.850	ENSTSYG00000005606	PNLDC1	99	64.850	Carlito_syrichta
ENSMAUG00000012298	Pnldc1	100	47.581	ENSCAPG00000011893	PNLDC1	99	47.581	Cavia_aperea
ENSMAUG00000012298	Pnldc1	100	59.733	ENSCPOG00000019565	PNLDC1	99	59.733	Cavia_porcellus
ENSMAUG00000012298	Pnldc1	68	33.562	ENSCPOG00000002263	PARN	52	33.562	Cavia_porcellus
ENSMAUG00000012298	Pnldc1	100	67.293	ENSCCAG00000026232	PNLDC1	99	67.293	Cebus_capucinus
ENSMAUG00000012298	Pnldc1	100	70.243	ENSCATG00000033196	PNLDC1	99	70.243	Cercocebus_atys
ENSMAUG00000012298	Pnldc1	100	65.226	ENSCLAG00000003228	PNLDC1	99	65.226	Chinchilla_lanigera
ENSMAUG00000012298	Pnldc1	68	34.932	ENSCLAG00000015406	PARN	52	34.932	Chinchilla_lanigera
ENSMAUG00000012298	Pnldc1	95	66.275	ENSCSAG00000012478	PNLDC1	97	66.275	Chlorocebus_sabaeus
ENSMAUG00000012298	Pnldc1	96	54.883	ENSCPBG00000004050	PNLDC1	100	54.883	Chrysemys_picta_bellii
ENSMAUG00000012298	Pnldc1	95	67.258	ENSCANG00000043076	PNLDC1	97	67.258	Colobus_angolensis_palliatus
ENSMAUG00000012298	Pnldc1	100	65.041	ENSCGRG00001011981	-	99	65.041	Cricetulus_griseus_chok1gshd
ENSMAUG00000012298	Pnldc1	100	72.505	ENSCGRG00001007470	-	99	72.505	Cricetulus_griseus_chok1gshd
ENSMAUG00000012298	Pnldc1	100	72.505	ENSCGRG00000010221	-	99	72.505	Cricetulus_griseus_crigri
ENSMAUG00000012298	Pnldc1	100	66.934	ENSCGRG00000003103	-	99	66.934	Cricetulus_griseus_crigri
ENSMAUG00000012298	Pnldc1	64	30.822	ENSCSEG00000002064	parn	61	31.206	Cynoglossus_semilaevis
ENSMAUG00000012298	Pnldc1	68	32.877	ENSDARG00000102634	parn	77	33.333	Danio_rerio
ENSMAUG00000012298	Pnldc1	99	65.977	ENSDNOG00000013709	PNLDC1	99	65.977	Dasypus_novemcinctus
ENSMAUG00000012298	Pnldc1	67	34.507	ENSDNOG00000000833	PARN	52	35.616	Dasypus_novemcinctus
ENSMAUG00000012298	Pnldc1	100	62.335	ENSDORG00000011517	Pnldc1	100	66.242	Dipodomys_ordii
ENSMAUG00000012298	Pnldc1	93	58.847	ENSETEG00000007587	PNLDC1	99	58.847	Echinops_telfairi
ENSMAUG00000012298	Pnldc1	100	62.049	ENSEASG00005019029	PNLDC1	99	62.049	Equus_asinus_asinus
ENSMAUG00000012298	Pnldc1	100	68.889	ENSECAG00000012898	PNLDC1	99	68.889	Equus_caballus
ENSMAUG00000012298	Pnldc1	64	65.625	ENSEEUG00000005717	-	86	65.625	Erinaceus_europaeus
ENSMAUG00000012298	Pnldc1	85	32.877	ENSELUG00000013139	parn	54	32.877	Esox_lucius
ENSMAUG00000012298	Pnldc1	100	66.478	ENSFCAG00000002848	PNLDC1	99	66.478	Felis_catus
ENSMAUG00000012298	Pnldc1	94	47.505	ENSFALG00000012081	PNLDC1	99	47.505	Ficedula_albicollis
ENSMAUG00000012298	Pnldc1	99	64.272	ENSFDAG00000021334	PNLDC1	99	64.272	Fukomys_damarensis
ENSMAUG00000012298	Pnldc1	85	32.877	ENSGMOG00000003231	parn	74	32.877	Gadus_morhua
ENSMAUG00000012298	Pnldc1	77	46.778	ENSGALG00000011624	PNLDC1	82	46.778	Gallus_gallus
ENSMAUG00000012298	Pnldc1	85	30.137	ENSGACG00000019501	parn	67	30.769	Gasterosteus_aculeatus
ENSMAUG00000012298	Pnldc1	99	55.133	ENSGAGG00000015276	PNLDC1	100	56.017	Gopherus_agassizii
ENSMAUG00000012298	Pnldc1	100	66.729	ENSGGOG00000014077	PNLDC1	99	66.729	Gorilla_gorilla
ENSMAUG00000012298	Pnldc1	68	30.822	ENSHBUG00000017906	parn	56	30.822	Haplochromis_burtoni
ENSMAUG00000012298	Pnldc1	100	65.103	ENSHGLG00000006889	PNLDC1	99	65.103	Heterocephalus_glaber_female
ENSMAUG00000012298	Pnldc1	100	65.103	ENSHGLG00100018275	PNLDC1	99	65.103	Heterocephalus_glaber_male
ENSMAUG00000012298	Pnldc1	100	66.541	ENSSTOG00000005595	PNLDC1	99	66.541	Ictidomys_tridecemlineatus
ENSMAUG00000012298	Pnldc1	99	63.238	ENSJJAG00000009937	Pnldc1	99	63.238	Jaculus_jaculus
ENSMAUG00000012298	Pnldc1	72	32.192	ENSLBEG00000009167	parn	56	32.192	Labrus_bergylta
ENSMAUG00000012298	Pnldc1	68	34.932	ENSLAFG00000015036	PARN	53	34.932	Loxodonta_africana
ENSMAUG00000012298	Pnldc1	57	62.461	ENSLAFG00000030189	PNLDC1	92	62.461	Loxodonta_africana
ENSMAUG00000012298	Pnldc1	100	66.729	ENSMFAG00000041296	PNLDC1	99	66.729	Macaca_fascicularis
ENSMAUG00000012298	Pnldc1	100	66.729	ENSMMUG00000004181	PNLDC1	99	66.729	Macaca_mulatta
ENSMAUG00000012298	Pnldc1	100	66.541	ENSMNEG00000034271	PNLDC1	99	66.541	Macaca_nemestrina
ENSMAUG00000012298	Pnldc1	100	63.534	ENSMLEG00000044059	PNLDC1	99	63.534	Mandrillus_leucophaeus
ENSMAUG00000012298	Pnldc1	85	30.822	ENSMZEG00005013590	parn	69	30.822	Maylandia_zebra
ENSMAUG00000012298	Pnldc1	95	47.222	ENSMGAG00000012470	PNLDC1	97	47.222	Meleagris_gallopavo
ENSMAUG00000012298	Pnldc1	100	67.857	ENSMICG00000008021	PNLDC1	99	67.857	Microcebus_murinus
ENSMAUG00000012298	Pnldc1	100	68.668	ENSMOCG00000014287	Pnldc1	99	68.668	Microtus_ochrogaster
ENSMAUG00000012298	Pnldc1	99	60.000	ENSMODG00000007420	PNLDC1	99	60.000	Monodelphis_domestica
ENSMAUG00000012298	Pnldc1	100	69.057	MGP_CAROLIEiJ_G0021045	Pnldc1	99	69.057	Mus_caroli
ENSMAUG00000012298	Pnldc1	100	68.927	ENSMUSG00000073460	Pnldc1	99	68.927	Mus_musculus
ENSMAUG00000012298	Pnldc1	68	34.932	ENSMUSG00000022685	Parn	90	32.895	Mus_musculus
ENSMAUG00000012298	Pnldc1	100	69.492	MGP_PahariEiJ_G0023361	Pnldc1	99	69.492	Mus_pahari
ENSMAUG00000012298	Pnldc1	100	69.115	MGP_SPRETEiJ_G0021975	Pnldc1	99	69.115	Mus_spretus
ENSMAUG00000012298	Pnldc1	100	66.102	ENSMPUG00000004920	PNLDC1	99	66.102	Mustela_putorius_furo
ENSMAUG00000012298	Pnldc1	100	64.728	ENSMLUG00000000747	PNLDC1	99	64.728	Myotis_lucifugus
ENSMAUG00000012298	Pnldc1	100	68.679	ENSNGAG00000017714	Pnldc1	99	68.679	Nannospalax_galili
ENSMAUG00000012298	Pnldc1	95	65.551	ENSNLEG00000011282	PNLDC1	97	65.551	Nomascus_leucogenys
ENSMAUG00000012298	Pnldc1	51	54.406	ENSMEUG00000011926	-	52	54.406	Notamacropus_eugenii
ENSMAUG00000012298	Pnldc1	76	62.500	ENSOPRG00000003813	PNLDC1	78	62.500	Ochotona_princeps
ENSMAUG00000012298	Pnldc1	100	65.038	ENSODEG00000008047	PNLDC1	99	65.038	Octodon_degus
ENSMAUG00000012298	Pnldc1	68	30.822	ENSONIG00000000151	parn	51	30.822	Oreochromis_niloticus
ENSMAUG00000012298	Pnldc1	100	46.591	ENSOANG00000012199	PNLDC1	99	47.917	Ornithorhynchus_anatinus
ENSMAUG00000012298	Pnldc1	100	65.660	ENSOCUG00000013867	PNLDC1	99	65.660	Oryctolagus_cuniculus
ENSMAUG00000012298	Pnldc1	68	34.247	ENSORLG00020010313	parn	50	34.247	Oryzias_latipes_hni
ENSMAUG00000012298	Pnldc1	68	34.247	ENSORLG00015000300	parn	50	34.247	Oryzias_latipes_hsok
ENSMAUG00000012298	Pnldc1	100	66.917	ENSOGAG00000007331	PNLDC1	99	66.917	Otolemur_garnettii
ENSMAUG00000012298	Pnldc1	99	64.595	ENSOARG00000004585	PNLDC1	99	64.595	Ovis_aries
ENSMAUG00000012298	Pnldc1	100	66.729	ENSPPAG00000026651	PNLDC1	99	66.729	Pan_paniscus
ENSMAUG00000012298	Pnldc1	100	66.478	ENSPPRG00000012854	PNLDC1	99	66.478	Panthera_pardus
ENSMAUG00000012298	Pnldc1	99	62.689	ENSPTIG00000011501	PNLDC1	99	62.689	Panthera_tigris_altaica
ENSMAUG00000012298	Pnldc1	100	66.729	ENSPTRG00000018762	PNLDC1	99	66.729	Pan_troglodytes
ENSMAUG00000012298	Pnldc1	100	66.917	ENSPANG00000022009	PNLDC1	99	66.917	Papio_anubis
ENSMAUG00000012298	Pnldc1	68	34.932	ENSPKIG00000022807	parn	53	34.932	Paramormyrops_kingsleyae
ENSMAUG00000012298	Pnldc1	70	33.784	ENSPEMG00000018439	Parn	54	33.784	Peromyscus_maniculatus_bairdii
ENSMAUG00000012298	Pnldc1	100	69.115	ENSPEMG00000016301	Pnldc1	99	69.115	Peromyscus_maniculatus_bairdii
ENSMAUG00000012298	Pnldc1	72	35.135	ENSPMAG00000003956	parn	67	35.135	Petromyzon_marinus
ENSMAUG00000012298	Pnldc1	79	61.628	ENSPCIG00000023412	PNLDC1	98	61.628	Phascolarctos_cinereus
ENSMAUG00000012298	Pnldc1	100	65.348	ENSPPYG00000017148	PNLDC1	99	65.348	Pongo_abelii
ENSMAUG00000012298	Pnldc1	100	59.774	ENSPCAG00000014169	PNLDC1	99	59.774	Procavia_capensis
ENSMAUG00000012298	Pnldc1	100	68.045	ENSPCOG00000025722	PNLDC1	99	68.045	Propithecus_coquereli
ENSMAUG00000012298	Pnldc1	70	64.083	ENSPVAG00000005325	PNLDC1	73	64.083	Pteropus_vampyrus
ENSMAUG00000012298	Pnldc1	100	68.927	ENSRNOG00000023140	Pnldc1	99	68.927	Rattus_norvegicus
ENSMAUG00000012298	Pnldc1	68	34.932	ENSRNOG00000002912	Parn	76	37.975	Rattus_norvegicus
ENSMAUG00000012298	Pnldc1	100	66.917	ENSRBIG00000033806	PNLDC1	99	66.917	Rhinopithecus_bieti
ENSMAUG00000012298	Pnldc1	95	67.456	ENSRROG00000043919	PNLDC1	97	67.456	Rhinopithecus_roxellana
ENSMAUG00000012298	Pnldc1	100	67.481	ENSSBOG00000019135	PNLDC1	99	67.481	Saimiri_boliviensis_boliviensis
ENSMAUG00000012298	Pnldc1	95	61.462	ENSSHAG00000015192	PNLDC1	96	61.462	Sarcophilus_harrisii
ENSMAUG00000012298	Pnldc1	52	54.355	ENSSPUG00000004627	PNLDC1	93	54.355	Sphenodon_punctatus
ENSMAUG00000012298	Pnldc1	96	64.062	ENSSSCG00000004046	PNLDC1	99	64.062	Sus_scrofa
ENSMAUG00000012298	Pnldc1	90	48.125	ENSTGUG00000011418	PNLDC1	99	48.125	Taeniopygia_guttata
ENSMAUG00000012298	Pnldc1	68	31.507	ENSTNIG00000008252	parn	53	32.192	Tetraodon_nigroviridis
ENSMAUG00000012298	Pnldc1	96	53.620	ENSTBEG00000009131	PNLDC1	98	53.620	Tupaia_belangeri
ENSMAUG00000012298	Pnldc1	70	58.629	ENSTTRG00000010409	PNLDC1	73	58.629	Tursiops_truncatus
ENSMAUG00000012298	Pnldc1	100	57.815	ENSUAMG00000015783	PNLDC1	99	57.815	Ursus_americanus
ENSMAUG00000012298	Pnldc1	94	63.690	ENSUMAG00000011903	PNLDC1	99	63.690	Ursus_maritimus
ENSMAUG00000012298	Pnldc1	67	34.532	ENSVPAG00000008968	PARN	53	34.532	Vicugna_pacos
ENSMAUG00000012298	Pnldc1	96	65.953	ENSVVUG00000006586	PNLDC1	98	66.460	Vulpes_vulpes