EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000012750 (Gene tree)
Gene ID: 101827719
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|CAGH26|D130023A07Rik|Tnrc6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 80540 bases
Position: chrKB708127.1:75587926-75668465
Accession: 101827719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000012477	Ago_hook	PF10427.9	1.2e-18	1	1
ENSMAUP00000012488	Ago_hook	PF10427.9	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000016336	-	198	-	ENSMAUP00000012430	66 (aa)	-	-
ENSMAUT00000016383	-	5700	XM_005064452	ENSMAUP00000012477	1899 (aa)	XP_005064509	UPI000359F77C
ENSMAUT00000016394	-	5625	-	ENSMAUP00000012488	1874 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000012750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000012750	Tnrc6a	84	39.854	ENSMAUG00000021618	Tnrc6c	97	40.112
ENSMAUG00000012750	Tnrc6a	98	36.029	ENSMAUG00000016123	Tnrc6b	98	37.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012750	Tnrc6a	100	94.410	ENSG00000090905	TNRC6A	100	94.410	Homo_sapiens
ENSMAUG00000012750	Tnrc6a	98	91.223	ENSAMEG00000009333	TNRC6A	99	91.375	Ailuropoda_melanoleuca
ENSMAUG00000012750	Tnrc6a	97	78.762	ENSAPLG00000009978	TNRC6A	100	78.500	Anas_platyrhynchos
ENSMAUG00000012750	Tnrc6a	100	53.197	ENSACAG00000011857	TNRC6A	100	55.240	Anolis_carolinensis
ENSMAUG00000012750	Tnrc6a	100	94.081	ENSANAG00000025252	TNRC6A	100	94.343	Aotus_nancymaae
ENSMAUG00000012750	Tnrc6a	91	57.040	ENSAMXG00000019919	tnrc6a	99	57.101	Astyanax_mexicanus
ENSMAUG00000012750	Tnrc6a	100	93.228	ENSBTAG00000017999	TNRC6A	100	92.808	Bos_taurus
ENSMAUG00000012750	Tnrc6a	100	91.499	ENSCJAG00000020677	TNRC6A	100	92.581	Callithrix_jacchus
ENSMAUG00000012750	Tnrc6a	97	93.773	ENSCAFG00000017531	TNRC6A	99	93.773	Canis_familiaris
ENSMAUG00000012750	Tnrc6a	98	91.760	ENSCAFG00020021160	TNRC6A	99	92.591	Canis_lupus_dingo
ENSMAUG00000012750	Tnrc6a	100	93.228	ENSCHIG00000019448	TNRC6A	100	93.015	Capra_hircus
ENSMAUG00000012750	Tnrc6a	100	94.084	ENSTSYG00000012711	TNRC6A	100	94.241	Carlito_syrichta
ENSMAUG00000012750	Tnrc6a	99	95.103	ENSCPOG00000036684	TNRC6A	100	94.945	Cavia_porcellus
ENSMAUG00000012750	Tnrc6a	100	94.139	ENSCCAG00000033664	TNRC6A	100	94.244	Cebus_capucinus
ENSMAUG00000012750	Tnrc6a	99	94.013	ENSCATG00000019284	TNRC6A	99	94.013	Cercocebus_atys
ENSMAUG00000012750	Tnrc6a	100	89.529	ENSCLAG00000010217	TNRC6A	100	89.738	Chinchilla_lanigera
ENSMAUG00000012750	Tnrc6a	100	91.790	ENSCSAG00000006561	TNRC6A	100	92.045	Chlorocebus_sabaeus
ENSMAUG00000012750	Tnrc6a	95	86.531	ENSCHOG00000009374	TNRC6A	95	86.667	Choloepus_hoffmanni
ENSMAUG00000012750	Tnrc6a	91	81.178	ENSCPBG00000001881	TNRC6A	99	81.062	Chrysemys_picta_bellii
ENSMAUG00000012750	Tnrc6a	100	94.660	ENSCANG00000041549	TNRC6A	100	94.660	Colobus_angolensis_palliatus
ENSMAUG00000012750	Tnrc6a	100	98.686	ENSCGRG00001015021	Tnrc6a	100	98.686	Cricetulus_griseus_chok1gshd
ENSMAUG00000012750	Tnrc6a	99	97.793	ENSCGRG00000013351	Tnrc6a	99	97.793	Cricetulus_griseus_crigri
ENSMAUG00000012750	Tnrc6a	91	56.943	ENSDARG00000079688	tnrc6a	99	57.087	Danio_rerio
ENSMAUG00000012750	Tnrc6a	97	90.084	ENSDNOG00000013989	TNRC6A	99	89.927	Dasypus_novemcinctus
ENSMAUG00000012750	Tnrc6a	97	83.202	ENSETEG00000014658	TNRC6A	99	83.202	Echinops_telfairi
ENSMAUG00000012750	Tnrc6a	100	94.587	ENSEASG00005017693	TNRC6A	100	94.850	Equus_asinus_asinus
ENSMAUG00000012750	Tnrc6a	100	92.213	ENSECAG00000025056	TNRC6A	99	94.717	Equus_caballus
ENSMAUG00000012750	Tnrc6a	93	98.000	ENSEEUG00000004530	TNRC6A	99	84.969	Erinaceus_europaeus
ENSMAUG00000012750	Tnrc6a	100	93.183	ENSFCAG00000025236	TNRC6A	100	93.235	Felis_catus
ENSMAUG00000012750	Tnrc6a	99	75.911	ENSFALG00000003757	TNRC6A	99	76.810	Ficedula_albicollis
ENSMAUG00000012750	Tnrc6a	91	81.268	ENSGALG00000006068	TNRC6A	99	81.441	Gallus_gallus
ENSMAUG00000012750	Tnrc6a	91	80.449	ENSGAGG00000023209	TNRC6A	99	80.621	Gopherus_agassizii
ENSMAUG00000012750	Tnrc6a	99	94.149	ENSGGOG00000005137	TNRC6A	99	94.149	Gorilla_gorilla
ENSMAUG00000012750	Tnrc6a	99	92.687	ENSHGLG00000012474	-	100	92.528	Heterocephalus_glaber_female
ENSMAUG00000012750	Tnrc6a	94	73.419	ENSHGLG00000007368	-	93	73.363	Heterocephalus_glaber_female
ENSMAUG00000012750	Tnrc6a	99	92.561	ENSHGLG00100012496	-	100	92.402	Heterocephalus_glaber_male
ENSMAUG00000012750	Tnrc6a	99	90.992	ENSSTOG00000023394	TNRC6A	99	90.941	Ictidomys_tridecemlineatus
ENSMAUG00000012750	Tnrc6a	97	67.705	ENSLACG00000006277	TNRC6A	100	67.809	Latimeria_chalumnae
ENSMAUG00000012750	Tnrc6a	99	82.781	ENSLOCG00000005517	tnrc6a	93	82.781	Lepisosteus_oculatus
ENSMAUG00000012750	Tnrc6a	98	93.959	ENSLAFG00000004209	TNRC6A	99	93.794	Loxodonta_africana
ENSMAUG00000012750	Tnrc6a	100	94.555	ENSMMUG00000020428	TNRC6A	100	94.607	Macaca_mulatta
ENSMAUG00000012750	Tnrc6a	100	94.167	ENSMNEG00000034854	TNRC6A	100	94.167	Macaca_nemestrina
ENSMAUG00000012750	Tnrc6a	99	76.289	ENSMGAG00000006455	TNRC6A	99	76.694	Meleagris_gallopavo
ENSMAUG00000012750	Tnrc6a	100	95.141	ENSMICG00000030685	TNRC6A	100	95.037	Microcebus_murinus
ENSMAUG00000012750	Tnrc6a	100	98.210	ENSMOCG00000000152	Tnrc6a	100	98.210	Microtus_ochrogaster
ENSMAUG00000012750	Tnrc6a	99	77.994	ENSMODG00000016348	TNRC6A	99	78.593	Monodelphis_domestica
ENSMAUG00000012750	Tnrc6a	99	96.281	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	96.281	Mus_caroli
ENSMAUG00000012750	Tnrc6a	100	96.893	ENSMUSG00000052707	Tnrc6a	100	96.893	Mus_musculus
ENSMAUG00000012750	Tnrc6a	99	96.973	MGP_PahariEiJ_G0013635	Tnrc6a	99	96.973	Mus_pahari
ENSMAUG00000012750	Tnrc6a	100	93.840	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.737	Mus_spretus
ENSMAUG00000012750	Tnrc6a	97	83.315	ENSMPUG00000012324	TNRC6A	100	82.991	Mustela_putorius_furo
ENSMAUG00000012750	Tnrc6a	97	89.246	ENSMLUG00000002701	TNRC6A	100	88.983	Myotis_lucifugus
ENSMAUG00000012750	Tnrc6a	99	95.426	ENSNGAG00000020702	Tnrc6a	100	95.373	Nannospalax_galili
ENSMAUG00000012750	Tnrc6a	97	92.776	ENSNLEG00000011851	TNRC6A	98	92.776	Nomascus_leucogenys
ENSMAUG00000012750	Tnrc6a	77	83.186	ENSMEUG00000015959	-	77	82.854	Notamacropus_eugenii
ENSMAUG00000012750	Tnrc6a	95	99.254	ENSOPRG00000005819	TNRC6A	96	99.254	Ochotona_princeps
ENSMAUG00000012750	Tnrc6a	99	89.113	ENSODEG00000012802	TNRC6A	99	88.948	Octodon_degus
ENSMAUG00000012750	Tnrc6a	87	79.386	ENSOANG00000007672	TNRC6A	99	79.067	Ornithorhynchus_anatinus
ENSMAUG00000012750	Tnrc6a	97	89.352	ENSOCUG00000004325	TNRC6A	100	89.193	Oryctolagus_cuniculus
ENSMAUG00000012750	Tnrc6a	99	92.002	ENSOGAG00000006666	TNRC6A	100	92.260	Otolemur_garnettii
ENSMAUG00000012750	Tnrc6a	99	89.969	ENSOARG00000017950	TNRC6A	98	93.364	Ovis_aries
ENSMAUG00000012750	Tnrc6a	99	94.158	ENSPPAG00000028379	TNRC6A	100	94.158	Pan_paniscus
ENSMAUG00000012750	Tnrc6a	100	93.183	ENSPPRG00000005861	TNRC6A	100	93.235	Panthera_pardus
ENSMAUG00000012750	Tnrc6a	99	92.002	ENSPTIG00000006346	TNRC6A	99	92.054	Panthera_tigris_altaica
ENSMAUG00000012750	Tnrc6a	99	89.775	ENSPTRG00000007898	TNRC6A	99	91.202	Pan_troglodytes
ENSMAUG00000012750	Tnrc6a	100	91.706	ENSPANG00000018523	TNRC6A	100	91.862	Papio_anubis
ENSMAUG00000012750	Tnrc6a	87	75.369	ENSPKIG00000012859	tnrc6a	99	75.369	Paramormyrops_kingsleyae
ENSMAUG00000012750	Tnrc6a	77	77.417	ENSPSIG00000003965	TNRC6A	99	77.282	Pelodiscus_sinensis
ENSMAUG00000012750	Tnrc6a	100	97.526	ENSPEMG00000016318	Tnrc6a	100	97.840	Peromyscus_maniculatus_bairdii
ENSMAUG00000012750	Tnrc6a	97	81.862	ENSPCIG00000012106	TNRC6A	100	81.969	Phascolarctos_cinereus
ENSMAUG00000012750	Tnrc6a	99	90.983	ENSPPYG00000007202	TNRC6A	100	91.136	Pongo_abelii
ENSMAUG00000012750	Tnrc6a	96	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSMAUG00000012750	Tnrc6a	100	92.473	ENSPCOG00000010134	TNRC6A	100	92.577	Propithecus_coquereli
ENSMAUG00000012750	Tnrc6a	90	68.566	ENSPVAG00000012066	TNRC6A	99	68.969	Pteropus_vampyrus
ENSMAUG00000012750	Tnrc6a	100	95.981	ENSRNOG00000024737	Tnrc6a	100	95.981	Rattus_norvegicus
ENSMAUG00000012750	Tnrc6a	97	94.468	ENSRBIG00000014222	TNRC6A	99	94.468	Rhinopithecus_bieti
ENSMAUG00000012750	Tnrc6a	100	92.174	ENSRROG00000032360	TNRC6A	100	92.276	Rhinopithecus_roxellana
ENSMAUG00000012750	Tnrc6a	98	91.487	ENSSBOG00000036197	TNRC6A	99	92.403	Saimiri_boliviensis_boliviensis
ENSMAUG00000012750	Tnrc6a	91	82.678	ENSSHAG00000008811	TNRC6A	99	82.963	Sarcophilus_harrisii
ENSMAUG00000012750	Tnrc6a	91	58.615	ENSSFOG00015008920	tnrc6a	99	58.533	Scleropages_formosus
ENSMAUG00000012750	Tnrc6a	72	75.534	ENSSARG00000002479	TNRC6A	89	76.415	Sorex_araneus
ENSMAUG00000012750	Tnrc6a	90	77.823	ENSSPUG00000010525	TNRC6A	100	77.707	Sphenodon_punctatus
ENSMAUG00000012750	Tnrc6a	100	93.010	ENSSSCG00000038870	TNRC6A	99	95.331	Sus_scrofa
ENSMAUG00000012750	Tnrc6a	99	79.110	ENSTGUG00000006142	TNRC6A	100	79.529	Taeniopygia_guttata
ENSMAUG00000012750	Tnrc6a	98	89.295	ENSTBEG00000014965	TNRC6A	99	89.498	Tupaia_belangeri
ENSMAUG00000012750	Tnrc6a	93	90.625	ENSTTRG00000002008	TNRC6A	93	90.517	Tursiops_truncatus
ENSMAUG00000012750	Tnrc6a	80	93.382	ENSUAMG00000006656	-	93	93.645	Ursus_americanus
ENSMAUG00000012750	Tnrc6a	99	90.375	ENSUMAG00000008274	TNRC6A	99	95.573	Ursus_maritimus
ENSMAUG00000012750	Tnrc6a	55	85.787	ENSVPAG00000010764	-	57	85.787	Vicugna_pacos
ENSMAUG00000012750	Tnrc6a	99	93.717	ENSVVUG00000005380	TNRC6A	99	93.717	Vulpes_vulpes
ENSMAUG00000012750	Tnrc6a	94	63.534	ENSXETG00000030437	TNRC6A	99	63.720	Xenopus_tropicalis