EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000012800 (Gene tree)
Gene ID: 101840968
Gene Symbol: Rbm12
Alias: -
Full Name: copine 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 17819 bases
Position: chrKB708301.1:1536103-1553921
Accession: 101840968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000012503	RRM_1	PF00076.22	1.4e-29	1	3
ENSMAUP00000012503	RRM_1	PF00076.22	1.4e-29	2	3
ENSMAUP00000012503	RRM_1	PF00076.22	1.4e-29	3	3
ENSMAUP00000012496	RRM_1	PF00076.22	1.4e-29	1	3
ENSMAUP00000012496	RRM_1	PF00076.22	1.4e-29	2	3
ENSMAUP00000012496	RRM_1	PF00076.22	1.4e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000016402	-	3689	XM_005084623	ENSMAUP00000012496	997 (aa)	XP_005084680	A0A1U7QZZ7
ENSMAUT00000016409	-	2973	-	ENSMAUP00000012503	990 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000012800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000012800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000012800	Rbm12	58	71.264	ENSMAUG00000021752	-	68	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000012800	Rbm12	100	87.437	ENSG00000244462	RBM12	100	97.902	Homo_sapiens
ENSMAUG00000012800	Rbm12	100	86.103	ENSAMEG00000019189	RBM12	100	80.279	Ailuropoda_melanoleuca
ENSMAUG00000012800	Rbm12	90	81.707	ENSACAG00000006330	RBM12	98	75.811	Anolis_carolinensis
ENSMAUG00000012800	Rbm12	100	86.922	ENSANAG00000032596	RBM12	98	87.726	Aotus_nancymaae
ENSMAUG00000012800	Rbm12	100	88.407	ENSBTAG00000044015	RBM12	100	89.135	Bos_taurus
ENSMAUG00000012800	Rbm12	91	97.090	ENSCAFG00000008256	RBM12	98	97.090	Canis_familiaris
ENSMAUG00000012800	Rbm12	89	96.813	ENSCAFG00020005650	RBM12	100	88.306	Canis_lupus_dingo
ENSMAUG00000012800	Rbm12	100	86.794	ENSCHIG00000024592	RBM12	100	80.382	Capra_hircus
ENSMAUG00000012800	Rbm12	97	94.970	ENSTSYG00000030563	RBM12	98	78.270	Carlito_syrichta
ENSMAUG00000012800	Rbm12	85	90.471	ENSCAPG00000006176	RBM12	96	90.566	Cavia_aperea
ENSMAUG00000012800	Rbm12	100	90.010	ENSCPOG00000035170	RBM12	100	90.310	Cavia_porcellus
ENSMAUG00000012800	Rbm12	96	85.684	ENSCCAG00000036056	-	98	86.211	Cebus_capucinus
ENSMAUG00000012800	Rbm12	88	90.426	ENSCCAG00000035899	-	100	90.710	Cebus_capucinus
ENSMAUG00000012800	Rbm12	100	87.236	ENSCATG00000030934	RBM12	98	86.633	Cercocebus_atys
ENSMAUG00000012800	Rbm12	100	91.010	ENSCLAG00000017230	RBM12	100	91.010	Chinchilla_lanigera
ENSMAUG00000012800	Rbm12	100	87.236	ENSCANG00000030552	RBM12	98	86.734	Colobus_angolensis_palliatus
ENSMAUG00000012800	Rbm12	100	96.976	ENSCGRG00001021144	Rbm12	100	96.976	Cricetulus_griseus_chok1gshd
ENSMAUG00000012800	Rbm12	100	96.976	ENSCGRG00000012719	Rbm12	100	96.976	Cricetulus_griseus_crigri
ENSMAUG00000012800	Rbm12	100	90.232	ENSDORG00000028509	-	100	90.845	Dipodomys_ordii
ENSMAUG00000012800	Rbm12	100	84.662	ENSDORG00000000606	-	100	84.476	Dipodomys_ordii
ENSMAUG00000012800	Rbm12	100	87.298	ENSECAG00000021997	RBM12	100	80.441	Equus_caballus
ENSMAUG00000012800	Rbm12	59	95.161	ENSEEUG00000008858	-	56	95.161	Erinaceus_europaeus
ENSMAUG00000012800	Rbm12	100	86.694	ENSFDAG00000014663	RBM12	100	87.802	Fukomys_damarensis
ENSMAUG00000012800	Rbm12	90	85.253	ENSGALG00000030253	RBM12	100	80.301	Gallus_gallus
ENSMAUG00000012800	Rbm12	100	87.236	ENSGGOG00000028500	RBM12	98	86.533	Gorilla_gorilla
ENSMAUG00000012800	Rbm12	100	93.909	ENSHGLG00000013208	RBM12	100	90.020	Heterocephalus_glaber_female
ENSMAUG00000012800	Rbm12	84	96.708	ENSHGLG00100019158	RBM12	90	96.708	Heterocephalus_glaber_male
ENSMAUG00000012800	Rbm12	100	88.485	ENSSTOG00000019739	RBM12	100	88.081	Ictidomys_tridecemlineatus
ENSMAUG00000012800	Rbm12	98	76.957	ENSJJAG00000009879	-	100	70.825	Jaculus_jaculus
ENSMAUG00000012800	Rbm12	100	85.988	ENSLAFG00000010341	RBM12	100	87.087	Loxodonta_africana
ENSMAUG00000012800	Rbm12	100	87.337	ENSMFAG00000032583	RBM12	98	86.734	Macaca_fascicularis
ENSMAUG00000012800	Rbm12	100	87.337	ENSMMUG00000020960	CPNE1	100	86.633	Macaca_mulatta
ENSMAUG00000012800	Rbm12	100	87.337	ENSMNEG00000045365	RBM12	98	86.734	Macaca_nemestrina
ENSMAUG00000012800	Rbm12	100	87.337	ENSMLEG00000032492	RBM12	98	86.734	Mandrillus_leucophaeus
ENSMAUG00000012800	Rbm12	90	85.561	ENSMGAG00000001502	RBM12	100	80.711	Meleagris_gallopavo
ENSMAUG00000012800	Rbm12	100	82.395	ENSMICG00000029540	-	73	66.796	Microcebus_murinus
ENSMAUG00000012800	Rbm12	95	95.751	ENSMICG00000032761	-	98	78.995	Microcebus_murinus
ENSMAUG00000012800	Rbm12	100	96.307	ENSMOCG00000012950	Rbm12	100	96.088	Microtus_ochrogaster
ENSMAUG00000012800	Rbm12	96	84.371	ENSMODG00000001591	RBM12	98	84.647	Monodelphis_domestica
ENSMAUG00000012800	Rbm12	100	94.638	MGP_CAROLIEiJ_G0024551	Rbm12	100	94.935	Mus_caroli
ENSMAUG00000012800	Rbm12	100	95.565	ENSMUSG00000089824	Rbm12	100	95.565	Mus_musculus
ENSMAUG00000012800	Rbm12	100	95.829	MGP_PahariEiJ_G0025996	Rbm12	100	95.829	Mus_pahari
ENSMAUG00000012800	Rbm12	100	94.340	MGP_SPRETEiJ_G0025473	Rbm12	100	95.709	Mus_spretus
ENSMAUG00000012800	Rbm12	100	93.687	ENSMPUG00000017789	-	100	87.702	Mustela_putorius_furo
ENSMAUG00000012800	Rbm12	100	88.105	ENSMLUG00000011217	RBM12	98	88.206	Myotis_lucifugus
ENSMAUG00000012800	Rbm12	100	94.556	ENSNGAG00000015846	Rbm12	100	94.556	Nannospalax_galili
ENSMAUG00000012800	Rbm12	100	87.236	ENSNLEG00000010268	RBM12	98	86.533	Nomascus_leucogenys
ENSMAUG00000012800	Rbm12	96	84.052	ENSMEUG00000007621	RBM12	74	82.759	Notamacropus_eugenii
ENSMAUG00000012800	Rbm12	100	86.492	ENSOPRG00000005687	RBM12	100	86.895	Ochotona_princeps
ENSMAUG00000012800	Rbm12	100	87.438	ENSODEG00000013870	RBM12	100	87.364	Octodon_degus
ENSMAUG00000012800	Rbm12	100	87.437	ENSPPAG00000040719	RBM12	98	86.734	Pan_paniscus
ENSMAUG00000012800	Rbm12	100	87.437	ENSPTRG00000040708	-	98	86.734	Pan_troglodytes
ENSMAUG00000012800	Rbm12	100	87.437	ENSPTRG00000013446	RBM12	98	86.734	Pan_troglodytes
ENSMAUG00000012800	Rbm12	100	87.337	ENSPANG00000020003	CPNE1	98	86.734	Papio_anubis
ENSMAUG00000012800	Rbm12	83	85.385	ENSPSIG00000007369	RBM12	98	85.385	Pelodiscus_sinensis
ENSMAUG00000012800	Rbm12	100	96.806	ENSPEMG00000017769	Rbm12	100	96.806	Peromyscus_maniculatus_bairdii
ENSMAUG00000012800	Rbm12	55	82.609	ENSPFOG00000023551	rbm12	98	78.873	Poecilia_formosa
ENSMAUG00000012800	Rbm12	100	87.262	ENSPPYG00000010960	RBM12	100	86.861	Pongo_abelii
ENSMAUG00000012800	Rbm12	100	84.545	ENSPCAG00000008653	RBM12	100	77.645	Procavia_capensis
ENSMAUG00000012800	Rbm12	100	85.226	ENSPCOG00000023724	RBM12	98	79.899	Propithecus_coquereli
ENSMAUG00000012800	Rbm12	84	86.659	ENSPVAG00000014937	RBM12	100	82.164	Pteropus_vampyrus
ENSMAUG00000012800	Rbm12	72	95.621	ENSRNOG00000019723	Rbm12	100	91.860	Rattus_norvegicus
ENSMAUG00000012800	Rbm12	72	95.621	ENSRNOG00000049913	LOC100910990	100	91.860	Rattus_norvegicus
ENSMAUG00000012800	Rbm12	100	87.236	ENSRBIG00000042965	RBM12	98	86.633	Rhinopithecus_bieti
ENSMAUG00000012800	Rbm12	100	87.236	ENSRROG00000037485	RBM12	98	86.633	Rhinopithecus_roxellana
ENSMAUG00000012800	Rbm12	100	86.821	ENSSBOG00000027633	RBM12	98	87.626	Saimiri_boliviensis_boliviensis
ENSMAUG00000012800	Rbm12	96	84.371	ENSSHAG00000018585	RBM12	100	84.647	Sarcophilus_harrisii
ENSMAUG00000012800	Rbm12	100	94.374	ENSSSCG00000036156	RBM12	100	89.315	Sus_scrofa
ENSMAUG00000012800	Rbm12	92	85.366	ENSTGUG00000003002	RBM12	100	85.366	Taeniopygia_guttata
ENSMAUG00000012800	Rbm12	100	94.579	ENSTTRG00000017035	RBM12	100	80.441	Tursiops_truncatus
ENSMAUG00000012800	Rbm12	100	86.145	ENSUAMG00000010430	RBM12	100	80.742	Ursus_americanus
ENSMAUG00000012800	Rbm12	89	100.000	ENSVPAG00000003812	RBM12	91	100.000	Vicugna_pacos
ENSMAUG00000012800	Rbm12	88	65.961	ENSXETG00000033541	RBM12	72	63.007	Xenopus_tropicalis