EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000013040 (Gene tree)
Gene ID: 101834860
Gene Symbol: Prdm12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 14558 bases
Position: chrKB708319.1:2313394-2327951
Accession: 101834860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000012840	zf-C2H2	PF00096.26	8.1e-13	1	2
ENSMAUP00000012840	zf-C2H2	PF00096.26	8.1e-13	2	2
ENSMAUP00000012840	zf-met	PF12874.7	7.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000016748	-	1098	XM_005085516	ENSMAUP00000012840	365 (aa)	XP_005085573	A0A1U7R480

Gene Model

Click here to download ENSMAUG00000013040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000013040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000013040	Prdm12	68	43.529	ENSMAUG00000006768	Prdm5	94	43.529
ENSMAUG00000013040	Prdm12	50	42.623	ENSMAUG00000015438	Zfp64	64	42.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000013040	Prdm12	100	95.913	ENSG00000130711	PRDM12	100	95.913	Homo_sapiens
ENSMAUG00000013040	Prdm12	99	74.805	ENSAPOG00000016051	prdm12b	100	75.065	Acanthochromis_polyacanthus
ENSMAUG00000013040	Prdm12	99	62.797	ENSAPOG00000018234	-	100	62.797	Acanthochromis_polyacanthus
ENSMAUG00000013040	Prdm12	88	94.427	ENSAMEG00000016234	PRDM12	99	94.427	Ailuropoda_melanoleuca
ENSMAUG00000013040	Prdm12	99	75.130	ENSACIG00000005193	-	100	74.615	Amphilophus_citrinellus
ENSMAUG00000013040	Prdm12	99	74.474	ENSACIG00000019578	prdm12b	100	75.526	Amphilophus_citrinellus
ENSMAUG00000013040	Prdm12	99	75.853	ENSAOCG00000015040	prdm12b	100	76.378	Amphiprion_ocellaris
ENSMAUG00000013040	Prdm12	99	76.455	ENSAPEG00000015092	prdm12b	100	76.984	Amphiprion_percula
ENSMAUG00000013040	Prdm12	100	71.875	ENSAPEG00000022849	-	100	72.351	Amphiprion_percula
ENSMAUG00000013040	Prdm12	99	74.286	ENSATEG00000014595	-	99	80.994	Anabas_testudineus
ENSMAUG00000013040	Prdm12	93	98.235	ENSANAG00000020616	PRDM12	100	98.235	Aotus_nancymaae
ENSMAUG00000013040	Prdm12	89	81.871	ENSACLG00000007631	-	100	73.869	Astatotilapia_calliptera
ENSMAUG00000013040	Prdm12	99	77.929	ENSACLG00000011876	prdm12b	100	77.929	Astatotilapia_calliptera
ENSMAUG00000013040	Prdm12	99	82.432	ENSAMXG00000033665	prdm12b	100	82.888	Astyanax_mexicanus
ENSMAUG00000013040	Prdm12	99	78.571	ENSAMXG00000008540	PRDM12	100	78.571	Astyanax_mexicanus
ENSMAUG00000013040	Prdm12	100	96.986	ENSBTAG00000023797	PRDM12	100	96.986	Bos_taurus
ENSMAUG00000013040	Prdm12	100	95.890	ENSCJAG00000020540	PRDM12	100	95.890	Callithrix_jacchus
ENSMAUG00000013040	Prdm12	80	97.595	ENSCAFG00000023076	PRDM12	99	95.652	Canis_familiaris
ENSMAUG00000013040	Prdm12	100	96.986	ENSCAFG00020024046	PRDM12	100	96.986	Canis_lupus_dingo
ENSMAUG00000013040	Prdm12	100	96.712	ENSCHIG00000025005	PRDM12	100	96.712	Capra_hircus
ENSMAUG00000013040	Prdm12	93	92.647	ENSCPOG00000005901	PRDM12	100	92.647	Cavia_porcellus
ENSMAUG00000013040	Prdm12	100	96.438	ENSCCAG00000037485	PRDM12	100	96.438	Cebus_capucinus
ENSMAUG00000013040	Prdm12	100	96.438	ENSCATG00000020327	PRDM12	100	96.438	Cercocebus_atys
ENSMAUG00000013040	Prdm12	100	92.877	ENSCLAG00000005499	PRDM12	100	92.877	Chinchilla_lanigera
ENSMAUG00000013040	Prdm12	100	96.438	ENSCSAG00000014756	PRDM12	100	96.438	Chlorocebus_sabaeus
ENSMAUG00000013040	Prdm12	100	88.767	ENSCPBG00000022628	PRDM12	100	88.767	Chrysemys_picta_bellii
ENSMAUG00000013040	Prdm12	100	97.814	ENSCGRG00001015005	Prdm12	100	97.814	Cricetulus_griseus_chok1gshd
ENSMAUG00000013040	Prdm12	99	72.564	ENSCVAG00000000944	-	100	72.704	Cyprinodon_variegatus
ENSMAUG00000013040	Prdm12	99	76.738	ENSCVAG00000017166	prdm12b	100	77.540	Cyprinodon_variegatus
ENSMAUG00000013040	Prdm12	99	81.501	ENSDARG00000007430	prdm12b	100	80.902	Danio_rerio
ENSMAUG00000013040	Prdm12	99	96.712	ENSDNOG00000042302	PRDM12	99	96.712	Dasypus_novemcinctus
ENSMAUG00000013040	Prdm12	88	63.456	ENSEBUG00000016780	prdm12b	78	64.873	Eptatretus_burgeri
ENSMAUG00000013040	Prdm12	100	96.164	ENSEASG00005008472	PRDM12	100	96.164	Equus_asinus_asinus
ENSMAUG00000013040	Prdm12	100	95.890	ENSECAG00000005933	PRDM12	100	95.890	Equus_caballus
ENSMAUG00000013040	Prdm12	99	80.159	ENSELUG00000009905	prdm12b	100	80.159	Esox_lucius
ENSMAUG00000013040	Prdm12	99	76.087	ENSELUG00000013674	PRDM12	99	76.087	Esox_lucius
ENSMAUG00000013040	Prdm12	100	96.986	ENSFCAG00000043086	PRDM12	100	96.986	Felis_catus
ENSMAUG00000013040	Prdm12	100	89.041	ENSFALG00000001445	PRDM12	89	89.041	Ficedula_albicollis
ENSMAUG00000013040	Prdm12	99	75.862	ENSFHEG00000003944	prdm12b	100	76.658	Fundulus_heteroclitus
ENSMAUG00000013040	Prdm12	99	73.077	ENSFHEG00000007746	-	100	72.544	Fundulus_heteroclitus
ENSMAUG00000013040	Prdm12	91	82.282	ENSGMOG00000011797	prdm12b	96	81.232	Gadus_morhua
ENSMAUG00000013040	Prdm12	100	89.041	ENSGALG00000003895	PRDM12	100	89.041	Gallus_gallus
ENSMAUG00000013040	Prdm12	100	76.720	ENSGAFG00000010827	prdm12b	100	77.867	Gambusia_affinis
ENSMAUG00000013040	Prdm12	100	78.075	ENSGACG00000016713	prdm12b	100	78.075	Gasterosteus_aculeatus
ENSMAUG00000013040	Prdm12	100	89.041	ENSGAGG00000014083	PRDM12	100	89.041	Gopherus_agassizii
ENSMAUG00000013040	Prdm12	92	97.605	ENSGGOG00000010568	PRDM12	100	95.902	Gorilla_gorilla
ENSMAUG00000013040	Prdm12	99	76.455	ENSHBUG00000022878	prdm12b	100	76.455	Haplochromis_burtoni
ENSMAUG00000013040	Prdm12	89	81.871	ENSHBUG00000022537	-	93	73.869	Haplochromis_burtoni
ENSMAUG00000013040	Prdm12	92	97.605	ENSHGLG00000013939	PRDM12	100	96.164	Heterocephalus_glaber_female
ENSMAUG00000013040	Prdm12	89	80.994	ENSHCOG00000003663	prdm12b	100	73.980	Hippocampus_comes
ENSMAUG00000013040	Prdm12	99	73.046	ENSHCOG00000021167	-	100	73.046	Hippocampus_comes
ENSMAUG00000013040	Prdm12	99	81.283	ENSIPUG00000017053	prdm12b	100	80.475	Ictalurus_punctatus
ENSMAUG00000013040	Prdm12	99	75.543	ENSIPUG00000019544	PRDM12	100	75.543	Ictalurus_punctatus
ENSMAUG00000013040	Prdm12	93	99.408	ENSSTOG00000005986	PRDM12	88	99.408	Ictidomys_tridecemlineatus
ENSMAUG00000013040	Prdm12	90	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSMAUG00000013040	Prdm12	99	75.815	ENSKMAG00000021205	-	99	75.815	Kryptolebias_marmoratus
ENSMAUG00000013040	Prdm12	90	78.212	ENSKMAG00000016921	prdm12b	100	72.772	Kryptolebias_marmoratus
ENSMAUG00000013040	Prdm12	99	74.352	ENSLBEG00000007776	-	100	74.870	Labrus_bergylta
ENSMAUG00000013040	Prdm12	99	76.720	ENSLBEG00000017769	prdm12b	100	77.249	Labrus_bergylta
ENSMAUG00000013040	Prdm12	99	86.264	ENSLACG00000017560	PRDM12	99	86.264	Latimeria_chalumnae
ENSMAUG00000013040	Prdm12	99	81.351	ENSLOCG00000005429	prdm12b	99	81.283	Lepisosteus_oculatus
ENSMAUG00000013040	Prdm12	92	97.059	ENSLAFG00000006979	PRDM12	93	97.118	Loxodonta_africana
ENSMAUG00000013040	Prdm12	100	92.643	ENSMFAG00000040322	PRDM12	100	94.005	Macaca_fascicularis
ENSMAUG00000013040	Prdm12	100	96.438	ENSMNEG00000037234	PRDM12	100	96.438	Macaca_nemestrina
ENSMAUG00000013040	Prdm12	89	81.250	ENSMAMG00000018988	-	100	73.333	Mastacembelus_armatus
ENSMAUG00000013040	Prdm12	99	76.658	ENSMAMG00000013212	prdm12b	100	76.923	Mastacembelus_armatus
ENSMAUG00000013040	Prdm12	89	81.871	ENSMZEG00005000415	PRDM12	100	73.500	Maylandia_zebra
ENSMAUG00000013040	Prdm12	93	92.962	ENSMGAG00000005438	PRDM12	96	92.962	Meleagris_gallopavo
ENSMAUG00000013040	Prdm12	100	95.890	ENSMICG00000015480	PRDM12	100	95.890	Microcebus_murinus
ENSMAUG00000013040	Prdm12	99	94.231	ENSMOCG00000021026	Prdm12	93	99.413	Microtus_ochrogaster
ENSMAUG00000013040	Prdm12	100	90.959	ENSMODG00000012108	PRDM12	100	90.959	Monodelphis_domestica
ENSMAUG00000013040	Prdm12	99	66.220	ENSMALG00000021901	prdm12b	99	66.220	Monopterus_albus
ENSMAUG00000013040	Prdm12	100	97.808	MGP_CAROLIEiJ_G0023414	Prdm12	100	97.808	Mus_caroli
ENSMAUG00000013040	Prdm12	100	97.808	ENSMUSG00000079466	Prdm12	100	97.808	Mus_musculus
ENSMAUG00000013040	Prdm12	100	97.808	MGP_PahariEiJ_G0024871	Prdm12	100	97.808	Mus_pahari
ENSMAUG00000013040	Prdm12	100	97.808	MGP_SPRETEiJ_G0024331	Prdm12	100	97.808	Mus_spretus
ENSMAUG00000013040	Prdm12	100	95.068	ENSNGAG00000018480	Prdm12	100	95.068	Nannospalax_galili
ENSMAUG00000013040	Prdm12	99	75.066	ENSNBRG00000006727	prdm12b	100	75.853	Neolamprologus_brichardi
ENSMAUG00000013040	Prdm12	99	72.533	ENSNBRG00000024312	-	100	72.533	Neolamprologus_brichardi
ENSMAUG00000013040	Prdm12	100	80.822	ENSMEUG00000003828	PRDM12	100	80.822	Notamacropus_eugenii
ENSMAUG00000013040	Prdm12	90	97.576	ENSOPRG00000008680	PRDM12	100	97.576	Ochotona_princeps
ENSMAUG00000013040	Prdm12	93	98.534	ENSODEG00000016282	PRDM12	64	98.534	Octodon_degus
ENSMAUG00000013040	Prdm12	62	88.596	ENSOANG00000001043	PRDM12	100	88.596	Ornithorhynchus_anatinus
ENSMAUG00000013040	Prdm12	86	92.332	ENSOCUG00000008241	PRDM12	100	92.332	Oryctolagus_cuniculus
ENSMAUG00000013040	Prdm12	99	72.051	ENSORLG00000017558	-	100	73.096	Oryzias_latipes
ENSMAUG00000013040	Prdm12	100	76.240	ENSORLG00000007114	prdm12b	94	80.168	Oryzias_latipes
ENSMAUG00000013040	Prdm12	99	71.867	ENSORLG00020013167	-	100	72.911	Oryzias_latipes_hni
ENSMAUG00000013040	Prdm12	90	80.980	ENSORLG00020019565	prdm12b	94	79.888	Oryzias_latipes_hni
ENSMAUG00000013040	Prdm12	90	80.692	ENSORLG00015007621	prdm12b	94	79.609	Oryzias_latipes_hsok
ENSMAUG00000013040	Prdm12	99	72.051	ENSORLG00015003435	-	100	73.096	Oryzias_latipes_hsok
ENSMAUG00000013040	Prdm12	100	75.325	ENSOMEG00000004134	prdm12b	94	79.224	Oryzias_melastigma
ENSMAUG00000013040	Prdm12	99	73.643	ENSOMEG00000007762	-	100	73.902	Oryzias_melastigma
ENSMAUG00000013040	Prdm12	91	98.799	ENSOGAG00000007557	PRDM12	100	98.799	Otolemur_garnettii
ENSMAUG00000013040	Prdm12	79	97.213	ENSPPAG00000031506	-	97	97.213	Pan_paniscus
ENSMAUG00000013040	Prdm12	93	90.058	ENSPPRG00000023024	PRDM12	87	90.058	Panthera_pardus
ENSMAUG00000013040	Prdm12	100	96.175	ENSPTRG00000021475	PRDM12	100	96.175	Pan_troglodytes
ENSMAUG00000013040	Prdm12	100	96.175	ENSPTRG00000043324	-	100	96.175	Pan_troglodytes
ENSMAUG00000013040	Prdm12	100	96.438	ENSPANG00000025967	PRDM12	100	96.438	Papio_anubis
ENSMAUG00000013040	Prdm12	99	80.739	ENSPKIG00000007228	prdm12b	100	80.418	Paramormyrops_kingsleyae
ENSMAUG00000013040	Prdm12	93	78.348	ENSPKIG00000004305	PRDM12	99	78.348	Paramormyrops_kingsleyae
ENSMAUG00000013040	Prdm12	100	88.767	ENSPSIG00000006739	PRDM12	100	88.767	Pelodiscus_sinensis
ENSMAUG00000013040	Prdm12	99	73.368	ENSPMGG00000002356	-	88	79.464	Periophthalmus_magnuspinnatus
ENSMAUG00000013040	Prdm12	100	78.075	ENSPMGG00000008867	prdm12b	100	78.342	Periophthalmus_magnuspinnatus
ENSMAUG00000013040	Prdm12	91	99.699	ENSPEMG00000009969	Prdm12	95	95.702	Peromyscus_maniculatus_bairdii
ENSMAUG00000013040	Prdm12	100	91.233	ENSPCIG00000024119	PRDM12	100	91.233	Phascolarctos_cinereus
ENSMAUG00000013040	Prdm12	99	77.660	ENSPFOG00000019841	prdm12b	100	77.660	Poecilia_formosa
ENSMAUG00000013040	Prdm12	90	82.891	ENSPLAG00000016626	prdm12b	100	76.984	Poecilia_latipinna
ENSMAUG00000013040	Prdm12	97	76.280	ENSPMEG00000016698	prdm12b	100	76.359	Poecilia_mexicana
ENSMAUG00000013040	Prdm12	96	73.278	ENSPREG00000003211	-	96	73.278	Poecilia_reticulata
ENSMAUG00000013040	Prdm12	100	76.702	ENSPREG00000015073	prdm12b	100	77.225	Poecilia_reticulata
ENSMAUG00000013040	Prdm12	96	95.157	ENSPPYG00000019694	PRDM12	97	97.067	Pongo_abelii
ENSMAUG00000013040	Prdm12	100	96.995	ENSPCOG00000022255	PRDM12	100	96.995	Propithecus_coquereli
ENSMAUG00000013040	Prdm12	100	96.721	ENSPVAG00000001511	PRDM12	100	96.721	Pteropus_vampyrus
ENSMAUG00000013040	Prdm12	99	75.789	ENSPNYG00000009607	prdm12b	100	76.579	Pundamilia_nyererei
ENSMAUG00000013040	Prdm12	89	81.871	ENSPNYG00000013589	-	100	73.500	Pundamilia_nyererei
ENSMAUG00000013040	Prdm12	99	82.306	ENSPNAG00000024532	prdm12b	100	82.322	Pygocentrus_nattereri
ENSMAUG00000013040	Prdm12	99	74.731	ENSPNAG00000013396	PRDM12	100	74.394	Pygocentrus_nattereri
ENSMAUG00000013040	Prdm12	100	97.808	ENSRNOG00000009218	Prdm12	100	97.808	Rattus_norvegicus
ENSMAUG00000013040	Prdm12	87	98.107	ENSRBIG00000042712	PRDM12	96	91.977	Rhinopithecus_bieti
ENSMAUG00000013040	Prdm12	88	98.131	ENSRROG00000043554	PRDM12	100	98.131	Rhinopithecus_roxellana
ENSMAUG00000013040	Prdm12	100	90.984	ENSSHAG00000015972	PRDM12	100	90.984	Sarcophilus_harrisii
ENSMAUG00000013040	Prdm12	99	74.293	ENSSMAG00000003754	prdm12b	100	74.807	Scophthalmus_maximus
ENSMAUG00000013040	Prdm12	93	81.395	ENSSDUG00000019071	-	95	81.395	Seriola_dumerili
ENSMAUG00000013040	Prdm12	99	75.130	ENSSDUG00000023498	prdm12b	100	75.457	Seriola_dumerili
ENSMAUG00000013040	Prdm12	99	77.929	ENSSLDG00000013562	-	100	78.202	Seriola_lalandi_dorsalis
ENSMAUG00000013040	Prdm12	99	75.718	ENSSLDG00000009557	prdm12b	100	75.979	Seriola_lalandi_dorsalis
ENSMAUG00000013040	Prdm12	100	88.493	ENSSPUG00000013424	PRDM12	100	88.493	Sphenodon_punctatus
ENSMAUG00000013040	Prdm12	99	75.654	ENSSPAG00000018824	prdm12b	100	75.916	Stegastes_partitus
ENSMAUG00000013040	Prdm12	99	66.062	ENSSPAG00000022420	-	100	68.351	Stegastes_partitus
ENSMAUG00000013040	Prdm12	100	96.986	ENSSSCG00000005703	PRDM12	100	96.986	Sus_scrofa
ENSMAUG00000013040	Prdm12	99	75.000	ENSTRUG00000013239	-	100	75.269	Takifugu_rubripes
ENSMAUG00000013040	Prdm12	99	76.115	ENSTRUG00000018659	prdm12b	100	77.688	Takifugu_rubripes
ENSMAUG00000013040	Prdm12	99	75.610	ENSTNIG00000005859	-	99	75.610	Tetraodon_nigroviridis
ENSMAUG00000013040	Prdm12	99	76.440	ENSTNIG00000009020	prdm12b	99	78.284	Tetraodon_nigroviridis
ENSMAUG00000013040	Prdm12	96	96.275	ENSUAMG00000009653	PRDM12	97	96.275	Ursus_americanus
ENSMAUG00000013040	Prdm12	91	98.795	ENSVVUG00000027662	PRDM12	79	98.795	Vulpes_vulpes
ENSMAUG00000013040	Prdm12	90	82.891	ENSXCOG00000002836	prdm12b	100	77.867	Xiphophorus_couchianus
ENSMAUG00000013040	Prdm12	89	83.234	ENSXMAG00000005537	prdm12b	100	77.454	Xiphophorus_maculatus
ENSMAUG00000013040	Prdm12	99	73.698	ENSXMAG00000028012	-	100	73.711	Xiphophorus_maculatus