EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000013307 (Gene tree)
Gene ID: 101829976
Gene Symbol: Scaf4
Alias: Sfrs15|Sra4|Srsf15
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 33531 bases
Position: chrKB708169.1:7600720-7634250
Accession: 101829976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000013269	RRM_1	PF00076.22	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000017179	-	3369	XM_013116189	ENSMAUP00000013269	1122 (aa)	XP_012971643	-

Gene Model

Click here to download ENSMAUG00000013307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000013307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000013307	Scaf4	100	88.811	ENSG00000156304	SCAF4	99	88.370	Homo_sapiens
ENSMAUG00000013307	Scaf4	73	89.078	ENSAMEG00000014987	SCAF4	100	86.768	Ailuropoda_melanoleuca
ENSMAUG00000013307	Scaf4	100	74.074	ENSAPLG00000002509	SCAF4	62	81.250	Anas_platyrhynchos
ENSMAUG00000013307	Scaf4	96	66.511	ENSACAG00000002569	SCAF4	50	82.081	Anolis_carolinensis
ENSMAUG00000013307	Scaf4	100	88.292	ENSANAG00000037494	SCAF4	99	88.468	Aotus_nancymaae
ENSMAUG00000013307	Scaf4	93	49.364	ENSAMXG00000008585	scaf4a	60	61.178	Astyanax_mexicanus
ENSMAUG00000013307	Scaf4	100	88.152	ENSBTAG00000018855	SCAF4	99	87.820	Bos_taurus
ENSMAUG00000013307	Scaf4	100	88.137	ENSCJAG00000008993	SCAF4	98	89.183	Callithrix_jacchus
ENSMAUG00000013307	Scaf4	100	88.731	ENSCAFG00000008863	SCAF4	99	87.996	Canis_familiaris
ENSMAUG00000013307	Scaf4	100	87.045	ENSCAFG00020026019	SCAF4	100	86.588	Canis_lupus_dingo
ENSMAUG00000013307	Scaf4	100	87.975	ENSCHIG00000008385	SCAF4	99	87.566	Capra_hircus
ENSMAUG00000013307	Scaf4	92	89.863	ENSTSYG00000011344	SCAF4	98	89.895	Carlito_syrichta
ENSMAUG00000013307	Scaf4	100	87.114	ENSCPOG00000012443	SCAF4	99	86.849	Cavia_porcellus
ENSMAUG00000013307	Scaf4	100	88.801	ENSCCAG00000033727	SCAF4	99	88.536	Cebus_capucinus
ENSMAUG00000013307	Scaf4	100	87.895	ENSCATG00000030379	SCAF4	100	87.982	Cercocebus_atys
ENSMAUG00000013307	Scaf4	100	86.174	ENSCLAG00000006298	SCAF4	100	87.142	Chinchilla_lanigera
ENSMAUG00000013307	Scaf4	100	88.489	ENSCSAG00000009438	SCAF4	99	88.596	Chlorocebus_sabaeus
ENSMAUG00000013307	Scaf4	100	88.624	ENSCANG00000029847	SCAF4	99	88.624	Colobus_angolensis_palliatus
ENSMAUG00000013307	Scaf4	68	93.498	ENSCGRG00001020821	Scaf4	63	94.290	Cricetulus_griseus_chok1gshd
ENSMAUG00000013307	Scaf4	68	93.725	ENSCGRG00000014360	Scaf4	63	94.290	Cricetulus_griseus_crigri
ENSMAUG00000013307	Scaf4	100	85.372	ENSDNOG00000019014	SCAF4	93	85.195	Dasypus_novemcinctus
ENSMAUG00000013307	Scaf4	96	75.621	ENSETEG00000000583	SCAF4	99	75.643	Echinops_telfairi
ENSMAUG00000013307	Scaf4	100	88.673	ENSEASG00005007756	SCAF4	99	88.584	Equus_asinus_asinus
ENSMAUG00000013307	Scaf4	100	88.594	ENSECAG00000014248	SCAF4	99	88.506	Equus_caballus
ENSMAUG00000013307	Scaf4	58	52.518	ENSELUG00000002779	SCAF8	59	68.116	Esox_lucius
ENSMAUG00000013307	Scaf4	100	88.407	ENSFCAG00000002228	SCAF4	99	88.085	Felis_catus
ENSMAUG00000013307	Scaf4	100	85.480	ENSFDAG00000017780	SCAF4	100	85.566	Fukomys_damarensis
ENSMAUG00000013307	Scaf4	100	74.956	ENSGALG00000033965	SCAF4	62	80.523	Gallus_gallus
ENSMAUG00000013307	Scaf4	74	52.941	ENSGACG00000020580	scaf4a	52	71.951	Gasterosteus_aculeatus
ENSMAUG00000013307	Scaf4	91	85.994	ENSGGOG00000015557	SCAF4	99	88.462	Gorilla_gorilla
ENSMAUG00000013307	Scaf4	100	87.094	ENSHGLG00000010582	SCAF4	99	87.709	Heterocephalus_glaber_female
ENSMAUG00000013307	Scaf4	100	87.094	ENSHGLG00100009441	SCAF4	100	87.709	Heterocephalus_glaber_male
ENSMAUG00000013307	Scaf4	100	82.597	ENSSTOG00000004450	SCAF4	100	83.481	Ictidomys_tridecemlineatus
ENSMAUG00000013307	Scaf4	100	86.472	ENSJJAG00000019447	Scaf4	99	86.826	Jaculus_jaculus
ENSMAUG00000013307	Scaf4	98	60.052	ENSLACG00000013913	SCAF4	59	66.461	Latimeria_chalumnae
ENSMAUG00000013307	Scaf4	95	56.093	ENSLOCG00000009162	scaf4a	58	65.559	Lepisosteus_oculatus
ENSMAUG00000013307	Scaf4	100	91.084	ENSLAFG00000010710	SCAF4	99	87.500	Loxodonta_africana
ENSMAUG00000013307	Scaf4	100	87.786	ENSMFAG00000037668	SCAF4	99	88.364	Macaca_fascicularis
ENSMAUG00000013307	Scaf4	100	87.664	ENSMMUG00000001712	SCAF4	99	88.276	Macaca_mulatta
ENSMAUG00000013307	Scaf4	100	87.762	ENSMNEG00000032966	SCAF4	99	88.112	Macaca_nemestrina
ENSMAUG00000013307	Scaf4	100	87.905	ENSMLEG00000039674	SCAF4	99	88.519	Mandrillus_leucophaeus
ENSMAUG00000013307	Scaf4	100	74.758	ENSMGAG00000014515	SCAF4	62	81.042	Meleagris_gallopavo
ENSMAUG00000013307	Scaf4	100	88.417	ENSMICG00000005256	SCAF4	99	89.046	Microcebus_murinus
ENSMAUG00000013307	Scaf4	100	88.918	ENSMOCG00000012087	Scaf4	98	89.006	Microtus_ochrogaster
ENSMAUG00000013307	Scaf4	100	81.488	ENSMODG00000021040	SCAF4	99	81.327	Monodelphis_domestica
ENSMAUG00000013307	Scaf4	100	83.719	MGP_CAROLIEiJ_G0020944	Scaf4	91	90.106	Mus_caroli
ENSMAUG00000013307	Scaf4	100	84.066	ENSMUSG00000022983	Scaf4	91	90.837	Mus_musculus
ENSMAUG00000013307	Scaf4	67	89.412	MGP_PahariEiJ_G0016649	Scaf4	63	89.673	Mus_pahari
ENSMAUG00000013307	Scaf4	100	84.206	MGP_SPRETEiJ_G0021850	Scaf4	92	89.683	Mus_spretus
ENSMAUG00000013307	Scaf4	100	87.916	ENSMPUG00000001078	SCAF4	99	87.456	Mustela_putorius_furo
ENSMAUG00000013307	Scaf4	99	75.212	ENSMLUG00000011472	SCAF4	77	80.947	Myotis_lucifugus
ENSMAUG00000013307	Scaf4	100	90.053	ENSNGAG00000005214	Scaf4	99	89.701	Nannospalax_galili
ENSMAUG00000013307	Scaf4	100	88.194	ENSNLEG00000003569	SCAF4	99	88.282	Nomascus_leucogenys
ENSMAUG00000013307	Scaf4	88	89.655	ENSOPRG00000007016	SCAF4	78	88.718	Ochotona_princeps
ENSMAUG00000013307	Scaf4	100	85.516	ENSODEG00000002718	SCAF4	99	86.297	Octodon_degus
ENSMAUG00000013307	Scaf4	100	85.627	ENSOCUG00000008336	SCAF4	99	85.902	Oryctolagus_cuniculus
ENSMAUG00000013307	Scaf4	100	78.725	ENSOGAG00000014653	SCAF4	93	88.608	Otolemur_garnettii
ENSMAUG00000013307	Scaf4	100	87.577	ENSOARG00000013894	SCAF4	98	87.170	Ovis_aries
ENSMAUG00000013307	Scaf4	100	88.811	ENSPPAG00000028535	SCAF4	99	88.370	Pan_paniscus
ENSMAUG00000013307	Scaf4	100	88.741	ENSPPRG00000000635	SCAF4	99	88.387	Panthera_pardus
ENSMAUG00000013307	Scaf4	100	85.929	ENSPTIG00000021578	SCAF4	99	83.657	Panthera_tigris_altaica
ENSMAUG00000013307	Scaf4	100	88.811	ENSPTRG00000013848	SCAF4	99	88.370	Pan_troglodytes
ENSMAUG00000013307	Scaf4	100	88.683	ENSPANG00000017332	SCAF4	99	88.948	Papio_anubis
ENSMAUG00000013307	Scaf4	64	62.903	ENSPKIG00000022408	scaf4a	86	62.520	Paramormyrops_kingsleyae
ENSMAUG00000013307	Scaf4	100	75.353	ENSPSIG00000014242	SCAF4	97	74.211	Pelodiscus_sinensis
ENSMAUG00000013307	Scaf4	61	84.127	ENSPCIG00000028183	SCAF4	91	79.663	Phascolarctos_cinereus
ENSMAUG00000013307	Scaf4	100	88.908	ENSPPYG00000011355	SCAF4	100	88.820	Pongo_abelii
ENSMAUG00000013307	Scaf4	69	82.270	ENSPCAG00000009998	SCAF4	99	78.477	Procavia_capensis
ENSMAUG00000013307	Scaf4	100	88.163	ENSPCOG00000018710	SCAF4	99	88.313	Propithecus_coquereli
ENSMAUG00000013307	Scaf4	100	88.287	ENSPVAG00000005220	SCAF4	99	87.390	Pteropus_vampyrus
ENSMAUG00000013307	Scaf4	99	88.122	ENSRNOG00000002104	Scaf4	91	88.122	Rattus_norvegicus
ENSMAUG00000013307	Scaf4	100	86.631	ENSRBIG00000040007	SCAF4	61	91.020	Rhinopithecus_bieti
ENSMAUG00000013307	Scaf4	100	88.977	ENSRROG00000029488	SCAF4	99	88.879	Rhinopithecus_roxellana
ENSMAUG00000013307	Scaf4	100	81.810	ENSSHAG00000001581	SCAF4	99	81.028	Sarcophilus_harrisii
ENSMAUG00000013307	Scaf4	84	48.036	ENSSFOG00015006338	scaf4a	54	57.741	Scleropages_formosus
ENSMAUG00000013307	Scaf4	66	57.414	ENSSMAG00000003738	scaf4b	52	72.785	Scophthalmus_maximus
ENSMAUG00000013307	Scaf4	64	58.214	ENSSDUG00000012380	scaf4b	52	71.519	Seriola_dumerili
ENSMAUG00000013307	Scaf4	100	86.515	ENSSARG00000009994	SCAF4	99	86.778	Sorex_araneus
ENSMAUG00000013307	Scaf4	100	85.389	ENSSSCG00000021023	SCAF4	99	85.402	Sus_scrofa
ENSMAUG00000013307	Scaf4	75	78.978	ENSTGUG00000013464	SCAF4	60	83.237	Taeniopygia_guttata
ENSMAUG00000013307	Scaf4	50	58.397	ENSTRUG00000009536	-	63	57.082	Takifugu_rubripes
ENSMAUG00000013307	Scaf4	100	87.855	ENSTTRG00000010963	SCAF4	99	88.032	Tursiops_truncatus
ENSMAUG00000013307	Scaf4	100	86.158	ENSUAMG00000008860	SCAF4	99	85.702	Ursus_americanus
ENSMAUG00000013307	Scaf4	100	87.223	ENSUMAG00000016962	SCAF4	100	87.400	Ursus_maritimus
ENSMAUG00000013307	Scaf4	100	88.731	ENSVVUG00000002953	SCAF4	100	87.996	Vulpes_vulpes
ENSMAUG00000013307	Scaf4	99	54.492	ENSXETG00000007351	scaf4	62	61.593	Xenopus_tropicalis