EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000013873 (Gene tree)
Gene ID: 101842938
Gene Symbol: Chd3
Alias: 2600010P09Rik|Chd7|Mi-2 alpha|Prp7|Prp9-1
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 25858 bases
Position: chrKB708137.1:7776132-7801989
Accession: 101842938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000014137	ResIII	PF04851.15	1.6e-08	1	1
ENSMAUP00000014081	ResIII	PF04851.15	1.7e-08	1	1
ENSMAUP00000014074	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000017989	-	6138	XM_013111645	ENSMAUP00000014074	2045 (aa)	XP_012967099	-
ENSMAUT00000018047	-	6493	XM_021225739	ENSMAUP00000014132	293 (aa)	XP_021081398	-
ENSMAUT00000018052	-	5475	-	ENSMAUP00000014137	1824 (aa)	-	-
ENSMAUT00000017996	-	6036	-	ENSMAUP00000014081	2011 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000013873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000013873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000013873	Chd3	100	95.973	ENSG00000170004	CHD3	99	97.122	Homo_sapiens
ENSMAUG00000013873	Chd3	83	82.540	ENSAPOG00000005614	chd3	94	82.540	Acanthochromis_polyacanthus
ENSMAUG00000013873	Chd3	74	93.119	ENSAMEG00000003025	-	100	96.188	Ailuropoda_melanoleuca
ENSMAUG00000013873	Chd3	85	80.060	ENSACIG00000019671	chd3	99	79.770	Amphilophus_citrinellus
ENSMAUG00000013873	Chd3	89	80.546	ENSAOCG00000023784	chd3	97	81.771	Amphiprion_ocellaris
ENSMAUG00000013873	Chd3	89	79.863	ENSAPEG00000006341	chd3	96	75.376	Amphiprion_percula
ENSMAUG00000013873	Chd3	89	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSMAUG00000013873	Chd3	99	83.270	ENSACAG00000004276	CHD3	95	84.526	Anolis_carolinensis
ENSMAUG00000013873	Chd3	99	94.478	ENSANAG00000034323	CHD3	99	96.863	Aotus_nancymaae
ENSMAUG00000013873	Chd3	99	72.425	ENSACLG00000009222	chd3	99	73.927	Astatotilapia_calliptera
ENSMAUG00000013873	Chd3	99	93.989	ENSBTAG00000014377	CHD3	97	96.825	Bos_taurus
ENSMAUG00000013873	Chd3	97	96.878	ENSCJAG00000014766	CHD3	99	96.878	Callithrix_jacchus
ENSMAUG00000013873	Chd3	99	94.365	ENSCAFG00000016859	CHD3	99	96.268	Canis_familiaris
ENSMAUG00000013873	Chd3	99	94.365	ENSCAFG00020007422	CHD3	100	96.727	Canis_lupus_dingo
ENSMAUG00000013873	Chd3	99	94.423	ENSCHIG00000016737	CHD3	100	96.768	Capra_hircus
ENSMAUG00000013873	Chd3	99	94.533	ENSTSYG00000035658	CHD3	98	97.315	Carlito_syrichta
ENSMAUG00000013873	Chd3	97	93.993	ENSCAPG00000014864	CHD3	99	93.993	Cavia_aperea
ENSMAUG00000013873	Chd3	97	96.567	ENSCPOG00000022653	CHD3	99	96.567	Cavia_porcellus
ENSMAUG00000013873	Chd3	100	96.053	ENSCCAG00000034792	CHD3	100	96.053	Cebus_capucinus
ENSMAUG00000013873	Chd3	99	94.369	ENSCATG00000041717	CHD3	99	97.020	Cercocebus_atys
ENSMAUG00000013873	Chd3	99	94.423	ENSCLAG00000010523	CHD3	100	97.363	Chinchilla_lanigera
ENSMAUG00000013873	Chd3	99	94.204	ENSCSAG00000011122	CHD3	100	96.804	Chlorocebus_sabaeus
ENSMAUG00000013873	Chd3	92	83.550	ENSCPBG00000011966	CHD3	99	87.037	Chrysemys_picta_bellii
ENSMAUG00000013873	Chd3	99	94.314	ENSCANG00000037641	CHD3	99	96.917	Colobus_angolensis_palliatus
ENSMAUG00000013873	Chd3	99	96.608	ENSCGRG00001011306	Chd3	100	99.121	Cricetulus_griseus_chok1gshd
ENSMAUG00000013873	Chd3	91	99.265	ENSCGRG00000007878	Chd3	99	99.265	Cricetulus_griseus_crigri
ENSMAUG00000013873	Chd3	90	79.868	ENSCSEG00000004489	chd3	99	75.529	Cynoglossus_semilaevis
ENSMAUG00000013873	Chd3	87	82.072	ENSCVAG00000007293	chd3	95	82.072	Cyprinodon_variegatus
ENSMAUG00000013873	Chd3	94	79.599	ENSDARG00000021405	chd3	99	76.493	Danio_rerio
ENSMAUG00000013873	Chd3	96	82.002	ENSDNOG00000047846	CHD3	98	82.002	Dasypus_novemcinctus
ENSMAUG00000013873	Chd3	99	93.979	ENSDORG00000010713	Chd3	100	96.432	Dipodomys_ordii
ENSMAUG00000013873	Chd3	98	89.324	ENSETEG00000017733	CHD3	100	90.456	Echinops_telfairi
ENSMAUG00000013873	Chd3	58	76.406	ENSEBUG00000008310	chd3	99	70.377	Eptatretus_burgeri
ENSMAUG00000013873	Chd3	99	94.253	ENSEASG00005019360	CHD3	100	97.001	Equus_asinus_asinus
ENSMAUG00000013873	Chd3	99	94.308	ENSECAG00000010051	CHD3	100	97.056	Equus_caballus
ENSMAUG00000013873	Chd3	92	94.915	ENSEEUG00000015205	CHD3	92	96.154	Erinaceus_europaeus
ENSMAUG00000013873	Chd3	84	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSMAUG00000013873	Chd3	99	93.658	ENSFCAG00000009629	CHD3	96	95.988	Felis_catus
ENSMAUG00000013873	Chd3	99	94.478	ENSFDAG00000008220	CHD3	99	94.318	Fukomys_damarensis
ENSMAUG00000013873	Chd3	87	80.983	ENSGMOG00000013599	chd3	90	80.609	Gadus_morhua
ENSMAUG00000013873	Chd3	59	76.629	ENSGAFG00000004055	chd3	99	75.043	Gambusia_affinis
ENSMAUG00000013873	Chd3	99	70.333	ENSGACG00000019275	chd3	90	73.844	Gasterosteus_aculeatus
ENSMAUG00000013873	Chd3	82	82.157	ENSGAGG00000013164	CHD3	98	86.490	Gopherus_agassizii
ENSMAUG00000013873	Chd3	99	94.478	ENSGGOG00000013496	CHD3	99	97.020	Gorilla_gorilla
ENSMAUG00000013873	Chd3	99	96.083	ENSHGLG00000012017	CHD3	100	96.083	Heterocephalus_glaber_female
ENSMAUG00000013873	Chd3	89	87.370	ENSHGLG00100013902	CHD3	99	89.787	Heterocephalus_glaber_male
ENSMAUG00000013873	Chd3	96	71.746	ENSHCOG00000010170	chd3	96	72.440	Hippocampus_comes
ENSMAUG00000013873	Chd3	92	76.524	ENSIPUG00000003271	chd3	96	78.734	Ictalurus_punctatus
ENSMAUG00000013873	Chd3	96	97.363	ENSSTOG00000025907	CHD3	100	97.363	Ictidomys_tridecemlineatus
ENSMAUG00000013873	Chd3	99	93.870	ENSJJAG00000017633	Chd3	100	96.536	Jaculus_jaculus
ENSMAUG00000013873	Chd3	87	90.047	ENSKMAG00000019292	chd3	88	90.047	Kryptolebias_marmoratus
ENSMAUG00000013873	Chd3	88	75.986	ENSLBEG00000028485	chd3	91	87.826	Labrus_bergylta
ENSMAUG00000013873	Chd3	98	74.284	ENSLACG00000008031	CHD3	98	75.064	Latimeria_chalumnae
ENSMAUG00000013873	Chd3	99	75.532	ENSLOCG00000013965	chd3	97	77.018	Lepisosteus_oculatus
ENSMAUG00000013873	Chd3	91	94.363	ENSLAFG00000000572	CHD3	100	93.114	Loxodonta_africana
ENSMAUG00000013873	Chd3	99	94.314	ENSMFAG00000020113	CHD3	99	96.968	Macaca_fascicularis
ENSMAUG00000013873	Chd3	99	92.127	ENSMMUG00000022221	CHD3	99	93.684	Macaca_mulatta
ENSMAUG00000013873	Chd3	99	94.314	ENSMNEG00000001728	CHD3	99	96.968	Macaca_nemestrina
ENSMAUG00000013873	Chd3	99	94.369	ENSMLEG00000032249	CHD3	99	97.020	Mandrillus_leucophaeus
ENSMAUG00000013873	Chd3	92	74.046	ENSMAMG00000000564	chd3	99	76.159	Mastacembelus_armatus
ENSMAUG00000013873	Chd3	100	93.199	ENSMICG00000008741	CHD3	100	93.199	Microcebus_murinus
ENSMAUG00000013873	Chd3	99	96.499	ENSMOCG00000004848	Chd3	100	99.015	Microtus_ochrogaster
ENSMAUG00000013873	Chd3	98	73.430	ENSMMOG00000012699	chd3	99	73.846	Mola_mola
ENSMAUG00000013873	Chd3	99	89.836	ENSMODG00000007509	CHD3	100	93.892	Monodelphis_domestica
ENSMAUG00000013873	Chd3	99	97.076	MGP_CAROLIEiJ_G0016564	Chd3	100	98.196	Mus_caroli
ENSMAUG00000013873	Chd3	100	97.133	ENSMUSG00000018474	Chd3	99	98.249	Mus_musculus
ENSMAUG00000013873	Chd3	99	97.225	MGP_PahariEiJ_G0017695	Chd3	100	98.408	Mus_pahari
ENSMAUG00000013873	Chd3	100	96.937	MGP_SPRETEiJ_G0017400	Chd3	100	98.249	Mus_spretus
ENSMAUG00000013873	Chd3	94	94.172	ENSMPUG00000008861	CHD3	100	96.849	Mustela_putorius_furo
ENSMAUG00000013873	Chd3	99	93.992	ENSMLUG00000014643	-	98	95.434	Myotis_lucifugus
ENSMAUG00000013873	Chd3	99	95.134	ENSNGAG00000000773	Chd3	98	97.665	Nannospalax_galili
ENSMAUG00000013873	Chd3	92	73.595	ENSNBRG00000000636	chd3	97	75.969	Neolamprologus_brichardi
ENSMAUG00000013873	Chd3	98	92.450	ENSNLEG00000009770	CHD3	100	93.672	Nomascus_leucogenys
ENSMAUG00000013873	Chd3	87	90.934	ENSMEUG00000005852	CHD3	87	90.934	Notamacropus_eugenii
ENSMAUG00000013873	Chd3	99	92.728	ENSOPRG00000011069	CHD3	100	95.304	Ochotona_princeps
ENSMAUG00000013873	Chd3	99	93.931	ENSODEG00000017785	CHD3	99	96.552	Octodon_degus
ENSMAUG00000013873	Chd3	98	73.799	ENSONIG00000009292	chd3	100	74.343	Oreochromis_niloticus
ENSMAUG00000013873	Chd3	99	89.113	ENSOCUG00000029299	CHD3	100	91.307	Oryctolagus_cuniculus
ENSMAUG00000013873	Chd3	84	69.880	ENSORLG00000007107	chd3	93	71.130	Oryzias_latipes
ENSMAUG00000013873	Chd3	56	74.903	ENSORLG00020008387	chd3	95	72.551	Oryzias_latipes_hni
ENSMAUG00000013873	Chd3	76	77.929	ENSOMEG00000013691	chd3	99	77.553	Oryzias_melastigma
ENSMAUG00000013873	Chd3	99	93.822	ENSOGAG00000003216	CHD3	100	95.992	Otolemur_garnettii
ENSMAUG00000013873	Chd3	99	91.485	ENSOARG00000017855	CHD3	99	94.523	Ovis_aries
ENSMAUG00000013873	Chd3	99	92.097	ENSPPAG00000032886	CHD3	99	94.734	Pan_paniscus
ENSMAUG00000013873	Chd3	99	93.876	ENSPPRG00000000626	CHD3	98	96.589	Panthera_pardus
ENSMAUG00000013873	Chd3	100	96.068	ENSPTRG00000008714	CHD3	99	97.174	Pan_troglodytes
ENSMAUG00000013873	Chd3	100	94.607	ENSPANG00000023938	CHD3	99	96.667	Papio_anubis
ENSMAUG00000013873	Chd3	97	77.562	ENSPKIG00000006305	chd3	99	80.347	Paramormyrops_kingsleyae
ENSMAUG00000013873	Chd3	59	89.507	ENSPSIG00000010177	CHD3	98	89.872	Pelodiscus_sinensis
ENSMAUG00000013873	Chd3	99	96.116	ENSPEMG00000014262	Chd3	99	98.271	Peromyscus_maniculatus_bairdii
ENSMAUG00000013873	Chd3	96	92.916	ENSPCIG00000005442	CHD3	97	95.528	Phascolarctos_cinereus
ENSMAUG00000013873	Chd3	98	72.484	ENSPFOG00000012464	chd3	92	73.193	Poecilia_formosa
ENSMAUG00000013873	Chd3	87	83.401	ENSPLAG00000002887	chd3	98	72.004	Poecilia_latipinna
ENSMAUG00000013873	Chd3	52	81.469	ENSPMEG00000016725	chd3	94	72.035	Poecilia_mexicana
ENSMAUG00000013873	Chd3	92	81.119	ENSPREG00000011044	chd3	99	76.849	Poecilia_reticulata
ENSMAUG00000013873	Chd3	99	91.689	ENSPPYG00000007940	CHD3	98	93.734	Pongo_abelii
ENSMAUG00000013873	Chd3	93	96.694	ENSPCAG00000004350	CHD3	96	96.694	Procavia_capensis
ENSMAUG00000013873	Chd3	99	94.204	ENSPCOG00000020952	CHD3	99	96.753	Propithecus_coquereli
ENSMAUG00000013873	Chd3	86	97.033	ENSPVAG00000016344	CHD3	87	94.825	Pteropus_vampyrus
ENSMAUG00000013873	Chd3	97	77.593	ENSPNAG00000020393	chd3	98	80.618	Pygocentrus_nattereri
ENSMAUG00000013873	Chd3	99	95.137	ENSRNOG00000009722	Chd3	100	97.439	Rattus_norvegicus
ENSMAUG00000013873	Chd3	99	90.846	ENSRBIG00000033562	CHD3	99	93.484	Rhinopithecus_bieti
ENSMAUG00000013873	Chd3	96	97.020	ENSRROG00000029554	CHD3	99	97.020	Rhinopithecus_roxellana
ENSMAUG00000013873	Chd3	98	95.736	ENSSBOG00000020719	CHD3	99	97.071	Saimiri_boliviensis_boliviensis
ENSMAUG00000013873	Chd3	96	93.825	ENSSHAG00000014412	CHD3	100	93.928	Sarcophilus_harrisii
ENSMAUG00000013873	Chd3	94	77.897	ENSSFOG00015023123	chd3	98	75.595	Scleropages_formosus
ENSMAUG00000013873	Chd3	85	90.741	ENSSMAG00000006451	chd3	99	76.034	Scophthalmus_maximus
ENSMAUG00000013873	Chd3	54	74.598	ENSSDUG00000005792	chd3	95	72.161	Seriola_dumerili
ENSMAUG00000013873	Chd3	89	80.205	ENSSPAG00000013694	chd3	97	81.443	Stegastes_partitus
ENSMAUG00000013873	Chd3	99	94.098	ENSSSCG00000021363	CHD3	100	96.785	Sus_scrofa
ENSMAUG00000013873	Chd3	73	77.999	ENSTRUG00000014990	chd3	96	71.902	Takifugu_rubripes
ENSMAUG00000013873	Chd3	99	71.850	ENSTNIG00000012998	chd3	99	72.952	Tetraodon_nigroviridis
ENSMAUG00000013873	Chd3	69	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSMAUG00000013873	Chd3	98	94.494	ENSTTRG00000010295	CHD3	97	97.402	Tursiops_truncatus
ENSMAUG00000013873	Chd3	99	93.025	ENSUAMG00000005475	CHD3	99	95.430	Ursus_americanus
ENSMAUG00000013873	Chd3	59	98.148	ENSVPAG00000010794	-	62	98.148	Vicugna_pacos
ENSMAUG00000013873	Chd3	99	94.365	ENSVVUG00000028011	CHD3	99	96.590	Vulpes_vulpes
ENSMAUG00000013873	Chd3	99	71.877	ENSXETG00000012991	chd3	92	73.892	Xenopus_tropicalis
ENSMAUG00000013873	Chd3	50	93.333	ENSXCOG00000000809	chd3	93	83.145	Xiphophorus_couchianus
ENSMAUG00000013873	Chd3	83	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus