EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000013916 (Gene tree)
Gene ID: 101838950
Gene Symbol: Srbd1
Alias: D530025C17Rik
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 147765 bases
Position: chrKB708197.1:7471010-7618774
Accession: 101838950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000014043	S1	PF00575.23	6.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000017958	-	2511	XM_013118496	ENSMAUP00000014043	836 (aa)	XP_012973950	-

Gene Model

Click here to download ENSMAUG00000013916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000013916's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000013916	Srbd1	99	83.886	ENSG00000068784	SRBD1	79	86.347	Homo_sapiens
ENSMAUG00000013916	Srbd1	95	56.650	ENSAPOG00000005103	si:ch211-117n7.8	78	56.827	Acanthochromis_polyacanthus
ENSMAUG00000013916	Srbd1	99	85.053	ENSAMEG00000005993	SRBD1	79	87.438	Ailuropoda_melanoleuca
ENSMAUG00000013916	Srbd1	95	55.772	ENSACIG00000009875	si:ch211-117n7.8	80	56.015	Amphilophus_citrinellus
ENSMAUG00000013916	Srbd1	95	57.143	ENSAOCG00000024718	si:ch211-117n7.8	78	57.512	Amphiprion_ocellaris
ENSMAUG00000013916	Srbd1	95	57.266	ENSAPEG00000002645	si:ch211-117n7.8	81	57.266	Amphiprion_percula
ENSMAUG00000013916	Srbd1	95	56.720	ENSATEG00000010844	si:ch211-117n7.8	78	56.720	Anabas_testudineus
ENSMAUG00000013916	Srbd1	99	75.000	ENSAPLG00000006313	SRBD1	79	76.876	Anas_platyrhynchos
ENSMAUG00000013916	Srbd1	99	83.768	ENSANAG00000025573	SRBD1	79	86.224	Aotus_nancymaae
ENSMAUG00000013916	Srbd1	95	55.596	ENSACLG00000024219	si:ch211-117n7.8	77	55.596	Astatotilapia_calliptera
ENSMAUG00000013916	Srbd1	95	59.503	ENSAMXG00000004294	SRBD1	79	59.413	Astyanax_mexicanus
ENSMAUG00000013916	Srbd1	95	86.118	ENSBTAG00000007508	SRBD1	77	86.118	Bos_taurus
ENSMAUG00000013916	Srbd1	99	83.057	ENSCJAG00000000727	SRBD1	79	85.486	Callithrix_jacchus
ENSMAUG00000013916	Srbd1	99	84.123	ENSCAFG00000002554	SRBD1	82	84.123	Canis_familiaris
ENSMAUG00000013916	Srbd1	99	83.713	ENSCAFG00020026284	SRBD1	93	86.875	Canis_lupus_dingo
ENSMAUG00000013916	Srbd1	95	86.118	ENSCHIG00000016535	SRBD1	78	86.118	Capra_hircus
ENSMAUG00000013916	Srbd1	99	84.534	ENSTSYG00000012797	SRBD1	79	87.010	Carlito_syrichta
ENSMAUG00000013916	Srbd1	99	84.431	ENSCPOG00000004773	SRBD1	80	86.364	Cavia_porcellus
ENSMAUG00000013916	Srbd1	99	83.886	ENSCCAG00000025589	SRBD1	79	86.347	Cebus_capucinus
ENSMAUG00000013916	Srbd1	99	84.005	ENSCATG00000039530	SRBD1	79	86.470	Cercocebus_atys
ENSMAUG00000013916	Srbd1	95	87.469	ENSCLAG00000008623	SRBD1	79	87.469	Chinchilla_lanigera
ENSMAUG00000013916	Srbd1	99	84.005	ENSCSAG00000013350	SRBD1	79	86.470	Chlorocebus_sabaeus
ENSMAUG00000013916	Srbd1	77	92.157	ENSCHOG00000003805	SRBD1	65	92.157	Choloepus_hoffmanni
ENSMAUG00000013916	Srbd1	99	75.474	ENSCPBG00000005677	SRBD1	80	78.325	Chrysemys_picta_bellii
ENSMAUG00000013916	Srbd1	95	40.881	ENSCING00000005950	-	99	40.881	Ciona_intestinalis
ENSMAUG00000013916	Srbd1	97	41.430	ENSCSAVG00000000861	-	99	41.430	Ciona_savignyi
ENSMAUG00000013916	Srbd1	99	83.886	ENSCANG00000016307	SRBD1	79	86.347	Colobus_angolensis_palliatus
ENSMAUG00000013916	Srbd1	99	90.670	ENSCGRG00001000513	Srbd1	81	90.670	Cricetulus_griseus_chok1gshd
ENSMAUG00000013916	Srbd1	99	90.670	ENSCGRG00000002283	Srbd1	81	90.670	Cricetulus_griseus_crigri
ENSMAUG00000013916	Srbd1	95	55.172	ENSCSEG00000000856	si:ch211-117n7.8	78	55.296	Cynoglossus_semilaevis
ENSMAUG00000013916	Srbd1	95	56.242	ENSCVAG00000020212	si:ch211-117n7.8	84	56.242	Cyprinodon_variegatus
ENSMAUG00000013916	Srbd1	95	86.047	ENSDNOG00000018686	SRBD1	79	86.047	Dasypus_novemcinctus
ENSMAUG00000013916	Srbd1	99	84.569	ENSDORG00000010468	Srbd1	82	84.606	Dipodomys_ordii
ENSMAUG00000013916	Srbd1	95	36.275	FBgn0051156	CG31156	78	36.642	Drosophila_melanogaster
ENSMAUG00000013916	Srbd1	90	76.460	ENSETEG00000000739	SRBD1	73	76.804	Echinops_telfairi
ENSMAUG00000013916	Srbd1	89	46.509	ENSEBUG00000008902	si:ch211-117n7.8	96	46.509	Eptatretus_burgeri
ENSMAUG00000013916	Srbd1	92	87.984	ENSEASG00005003132	SRBD1	97	91.083	Equus_asinus_asinus
ENSMAUG00000013916	Srbd1	99	85.444	ENSECAG00000013865	SRBD1	77	87.961	Equus_caballus
ENSMAUG00000013916	Srbd1	95	58.680	ENSELUG00000012592	si:ch211-117n7.8	76	58.680	Esox_lucius
ENSMAUG00000013916	Srbd1	99	84.852	ENSFCAG00000005101	SRBD1	79	87.346	Felis_catus
ENSMAUG00000013916	Srbd1	99	72.879	ENSFALG00000012966	SRBD1	79	75.377	Ficedula_albicollis
ENSMAUG00000013916	Srbd1	99	84.311	ENSFDAG00000016670	SRBD1	82	84.311	Fukomys_damarensis
ENSMAUG00000013916	Srbd1	95	57.726	ENSFHEG00000019480	si:ch211-117n7.8	76	57.726	Fundulus_heteroclitus
ENSMAUG00000013916	Srbd1	62	50.862	ENSGMOG00000018010	-	100	50.862	Gadus_morhua
ENSMAUG00000013916	Srbd1	95	76.543	ENSGALG00000009990	SRBD1	80	76.543	Gallus_gallus
ENSMAUG00000013916	Srbd1	95	56.227	ENSGAFG00000019664	si:ch211-117n7.8	78	56.227	Gambusia_affinis
ENSMAUG00000013916	Srbd1	77	57.339	ENSGACG00000010794	si:ch211-117n7.8	100	57.339	Gasterosteus_aculeatus
ENSMAUG00000013916	Srbd1	99	77.116	ENSGAGG00000006166	SRBD1	97	76.247	Gopherus_agassizii
ENSMAUG00000013916	Srbd1	99	84.005	ENSGGOG00000005910	SRBD1	81	86.470	Gorilla_gorilla
ENSMAUG00000013916	Srbd1	89	52.349	ENSHBUG00000013207	si:ch211-117n7.8	76	52.349	Haplochromis_burtoni
ENSMAUG00000013916	Srbd1	99	84.671	ENSHGLG00000018153	-	82	84.671	Heterocephalus_glaber_female
ENSMAUG00000013916	Srbd1	99	84.551	ENSHGLG00100015183	-	82	84.551	Heterocephalus_glaber_male
ENSMAUG00000013916	Srbd1	95	58.816	ENSIPUG00000009661	srbd1	79	58.816	Ictalurus_punctatus
ENSMAUG00000013916	Srbd1	99	86.467	ENSSTOG00000005898	SRBD1	81	86.467	Ictidomys_tridecemlineatus
ENSMAUG00000013916	Srbd1	95	83.436	ENSJJAG00000022244	Srbd1	79	83.436	Jaculus_jaculus
ENSMAUG00000013916	Srbd1	95	56.188	ENSKMAG00000003473	si:ch211-117n7.8	77	56.188	Kryptolebias_marmoratus
ENSMAUG00000013916	Srbd1	95	56.059	ENSLBEG00000027518	si:ch211-117n7.8	77	56.059	Labrus_bergylta
ENSMAUG00000013916	Srbd1	95	69.165	ENSLACG00000009790	SRBD1	93	69.165	Latimeria_chalumnae
ENSMAUG00000013916	Srbd1	99	60.473	ENSLOCG00000016360	si:ch211-117n7.8	81	60.473	Lepisosteus_oculatus
ENSMAUG00000013916	Srbd1	99	84.123	ENSMFAG00000042026	SRBD1	79	86.593	Macaca_fascicularis
ENSMAUG00000013916	Srbd1	99	84.123	ENSMMUG00000003490	SRBD1	79	86.593	Macaca_mulatta
ENSMAUG00000013916	Srbd1	99	81.161	ENSMNEG00000034701	SRBD1	79	83.518	Macaca_nemestrina
ENSMAUG00000013916	Srbd1	99	84.005	ENSMLEG00000000745	SRBD1	79	86.470	Mandrillus_leucophaeus
ENSMAUG00000013916	Srbd1	95	55.062	ENSMAMG00000021921	si:ch211-117n7.8	78	55.062	Mastacembelus_armatus
ENSMAUG00000013916	Srbd1	95	55.596	ENSMZEG00005027369	si:ch211-117n7.8	77	55.596	Maylandia_zebra
ENSMAUG00000013916	Srbd1	94	73.149	ENSMGAG00000010273	SRBD1	97	73.149	Meleagris_gallopavo
ENSMAUG00000013916	Srbd1	99	84.834	ENSMICG00000007835	SRBD1	79	87.331	Microcebus_murinus
ENSMAUG00000013916	Srbd1	99	88.769	ENSMOCG00000018716	Srbd1	79	91.439	Microtus_ochrogaster
ENSMAUG00000013916	Srbd1	95	54.994	ENSMMOG00000007507	si:ch211-117n7.8	81	54.994	Mola_mola
ENSMAUG00000013916	Srbd1	95	55.487	ENSMALG00000001562	si:ch211-117n7.8	77	55.734	Monopterus_albus
ENSMAUG00000013916	Srbd1	95	88.930	MGP_CAROLIEiJ_G0021934	Srbd1	99	90.461	Mus_caroli
ENSMAUG00000013916	Srbd1	95	88.806	ENSMUSG00000024135	Srbd1	99	89.175	Mus_musculus
ENSMAUG00000013916	Srbd1	95	88.060	MGP_PahariEiJ_G0020924	Srbd1	79	88.060	Mus_pahari
ENSMAUG00000013916	Srbd1	95	88.806	MGP_SPRETEiJ_G0022850	Srbd1	79	88.806	Mus_spretus
ENSMAUG00000013916	Srbd1	95	84.029	ENSMLUG00000007039	SRBD1	79	84.029	Myotis_lucifugus
ENSMAUG00000013916	Srbd1	99	86.651	ENSNGAG00000011893	Srbd1	82	86.651	Nannospalax_galili
ENSMAUG00000013916	Srbd1	95	54.926	ENSNBRG00000012873	si:ch211-117n7.8	80	54.926	Neolamprologus_brichardi
ENSMAUG00000013916	Srbd1	99	83.768	ENSNLEG00000016877	SRBD1	79	86.224	Nomascus_leucogenys
ENSMAUG00000013916	Srbd1	95	87.639	ENSODEG00000012095	SRBD1	81	87.639	Octodon_degus
ENSMAUG00000013916	Srbd1	95	56.143	ENSONIG00000000945	si:ch211-117n7.8	94	56.143	Oreochromis_niloticus
ENSMAUG00000013916	Srbd1	99	84.615	ENSOCUG00000015385	SRBD1	79	87.838	Oryctolagus_cuniculus
ENSMAUG00000013916	Srbd1	95	53.571	ENSORLG00000004427	si:ch211-117n7.8	75	53.325	Oryzias_latipes
ENSMAUG00000013916	Srbd1	95	56.489	ENSORLG00020012792	si:ch211-117n7.8	76	56.404	Oryzias_latipes_hni
ENSMAUG00000013916	Srbd1	95	56.527	ENSORLG00015018598	si:ch211-117n7.8	76	56.281	Oryzias_latipes_hsok
ENSMAUG00000013916	Srbd1	95	56.312	ENSOMEG00000012229	si:ch211-117n7.8	76	56.683	Oryzias_melastigma
ENSMAUG00000013916	Srbd1	95	82.432	ENSOGAG00000001076	SRBD1	79	82.432	Otolemur_garnettii
ENSMAUG00000013916	Srbd1	95	84.242	ENSOARG00000005958	SRBD1	80	84.242	Ovis_aries
ENSMAUG00000013916	Srbd1	99	83.768	ENSPPAG00000038442	SRBD1	79	86.224	Pan_paniscus
ENSMAUG00000013916	Srbd1	99	84.834	ENSPPRG00000003449	SRBD1	79	87.331	Panthera_pardus
ENSMAUG00000013916	Srbd1	99	84.953	ENSPTIG00000012495	SRBD1	79	87.454	Panthera_tigris_altaica
ENSMAUG00000013916	Srbd1	99	83.768	ENSPTRG00000011889	SRBD1	79	86.224	Pan_troglodytes
ENSMAUG00000013916	Srbd1	99	83.886	ENSPANG00000008063	SRBD1	79	86.347	Papio_anubis
ENSMAUG00000013916	Srbd1	99	57.058	ENSPKIG00000021973	si:ch211-117n7.8	79	58.971	Paramormyrops_kingsleyae
ENSMAUG00000013916	Srbd1	99	76.631	ENSPSIG00000008992	SRBD1	82	76.631	Pelodiscus_sinensis
ENSMAUG00000013916	Srbd1	100	53.426	ENSPMGG00000013348	si:ch211-117n7.8	81	56.173	Periophthalmus_magnuspinnatus
ENSMAUG00000013916	Srbd1	99	89.354	ENSPEMG00000020684	Srbd1	79	92.050	Peromyscus_maniculatus_bairdii
ENSMAUG00000013916	Srbd1	95	56.597	ENSPFOG00000010650	si:ch211-117n7.8	77	56.597	Poecilia_formosa
ENSMAUG00000013916	Srbd1	95	56.473	ENSPLAG00000002141	si:ch211-117n7.8	77	56.473	Poecilia_latipinna
ENSMAUG00000013916	Srbd1	95	56.720	ENSPMEG00000018537	si:ch211-117n7.8	77	56.720	Poecilia_mexicana
ENSMAUG00000013916	Srbd1	95	56.304	ENSPREG00000003258	si:ch211-117n7.8	79	56.304	Poecilia_reticulata
ENSMAUG00000013916	Srbd1	99	78.360	ENSPPYG00000012444	SRBD1	79	81.183	Pongo_abelii
ENSMAUG00000013916	Srbd1	92	77.850	ENSPCAG00000005629	SRBD1	79	77.850	Procavia_capensis
ENSMAUG00000013916	Srbd1	99	70.602	ENSPCOG00000017669	SRBD1	78	72.549	Propithecus_coquereli
ENSMAUG00000013916	Srbd1	89	77.926	ENSPVAG00000001782	SRBD1	73	77.926	Pteropus_vampyrus
ENSMAUG00000013916	Srbd1	95	52.898	ENSPNYG00000000508	si:ch211-117n7.8	80	52.898	Pundamilia_nyererei
ENSMAUG00000013916	Srbd1	95	59.533	ENSPNAG00000013492	SRBD1	80	59.803	Pygocentrus_nattereri
ENSMAUG00000013916	Srbd1	95	88.696	ENSRNOG00000014720	Srbd1	79	88.696	Rattus_norvegicus
ENSMAUG00000013916	Srbd1	99	83.886	ENSRBIG00000033486	SRBD1	79	86.347	Rhinopithecus_bieti
ENSMAUG00000013916	Srbd1	99	83.886	ENSRROG00000041599	SRBD1	79	86.347	Rhinopithecus_roxellana
ENSMAUG00000013916	Srbd1	99	84.286	ENSSBOG00000024982	SRBD1	79	86.224	Saimiri_boliviensis_boliviensis
ENSMAUG00000013916	Srbd1	99	56.573	ENSSFOG00015001128	si:ch211-117n7.8	88	56.272	Scleropages_formosus
ENSMAUG00000013916	Srbd1	95	56.350	ENSSMAG00000018256	si:ch211-117n7.8	76	56.597	Scophthalmus_maximus
ENSMAUG00000013916	Srbd1	95	55.610	ENSSLDG00000023189	si:ch211-117n7.8	77	55.610	Seriola_lalandi_dorsalis
ENSMAUG00000013916	Srbd1	99	75.747	ENSSARG00000009740	SRBD1	80	78.094	Sorex_araneus
ENSMAUG00000013916	Srbd1	99	74.432	ENSSPUG00000010475	SRBD1	88	75.643	Sphenodon_punctatus
ENSMAUG00000013916	Srbd1	95	54.377	ENSSPAG00000008092	-	78	54.367	Stegastes_partitus
ENSMAUG00000013916	Srbd1	99	85.362	ENSSSCG00000008445	SRBD1	78	87.469	Sus_scrofa
ENSMAUG00000013916	Srbd1	99	73.389	ENSTGUG00000003878	SRBD1	93	75.716	Taeniopygia_guttata
ENSMAUG00000013916	Srbd1	95	55.966	ENSTRUG00000007080	si:ch211-117n7.8	86	56.597	Takifugu_rubripes
ENSMAUG00000013916	Srbd1	95	54.756	ENSTNIG00000007464	si:ch211-117n7.8	77	54.756	Tetraodon_nigroviridis
ENSMAUG00000013916	Srbd1	65	96.809	ENSTBEG00000004556	SRBD1	56	96.809	Tupaia_belangeri
ENSMAUG00000013916	Srbd1	92	84.071	ENSTTRG00000011871	SRBD1	75	84.071	Tursiops_truncatus
ENSMAUG00000013916	Srbd1	99	85.884	ENSUAMG00000008126	SRBD1	97	84.783	Ursus_americanus
ENSMAUG00000013916	Srbd1	99	85.053	ENSUMAG00000012902	SRBD1	80	85.053	Ursus_maritimus
ENSMAUG00000013916	Srbd1	99	84.479	ENSVPAG00000006825	SRBD1	87	86.962	Vicugna_pacos
ENSMAUG00000013916	Srbd1	99	84.223	ENSVVUG00000005389	SRBD1	82	84.223	Vulpes_vulpes
ENSMAUG00000013916	Srbd1	95	57.561	ENSXETG00000002760	srbd1	80	58.293	Xenopus_tropicalis
ENSMAUG00000013916	Srbd1	95	55.961	ENSXMAG00000016861	si:ch211-117n7.8	78	55.961	Xiphophorus_maculatus