EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000013969 (Gene tree)
Gene ID: 101828646
Gene Symbol: Prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 53960 bases
Position: chrKB708174.1:12732029-12785988
Accession: 101828646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000014127	PRP1_N	PF06424.12	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000018042	-	3041	XM_005074555	ENSMAUP00000014127	941 (aa)	XP_005074612	A0A1U7QTX8

Gene Model

Click here to download ENSMAUG00000013969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000013969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000013969	Prpf6	100	98.300	ENSG00000101161	PRPF6	100	98.300	Homo_sapiens
ENSMAUG00000013969	Prpf6	100	93.199	ENSAPOG00000010395	prpf6	96	93.624	Acanthochromis_polyacanthus
ENSMAUG00000013969	Prpf6	100	97.452	ENSAMEG00000001916	PRPF6	99	97.452	Ailuropoda_melanoleuca
ENSMAUG00000013969	Prpf6	100	92.880	ENSACIG00000019862	prpf6	96	93.305	Amphilophus_citrinellus
ENSMAUG00000013969	Prpf6	100	93.092	ENSAOCG00000012988	prpf6	96	93.518	Amphiprion_ocellaris
ENSMAUG00000013969	Prpf6	100	86.397	ENSAPEG00000008301	prpf6	100	86.929	Amphiprion_percula
ENSMAUG00000013969	Prpf6	100	92.561	ENSATEG00000005581	prpf6	96	92.986	Anabas_testudineus
ENSMAUG00000013969	Prpf6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSMAUG00000013969	Prpf6	100	98.406	ENSANAG00000012661	PRPF6	100	98.940	Aotus_nancymaae
ENSMAUG00000013969	Prpf6	100	92.774	ENSACLG00000025875	prpf6	96	93.199	Astatotilapia_calliptera
ENSMAUG00000013969	Prpf6	99	93.298	ENSAMXG00000001929	prpf6	96	93.723	Astyanax_mexicanus
ENSMAUG00000013969	Prpf6	100	98.406	ENSBTAG00000011656	PRPF6	100	98.406	Bos_taurus
ENSMAUG00000013969	Prpf6	100	98.406	ENSCJAG00000010616	PRPF6	100	98.406	Callithrix_jacchus
ENSMAUG00000013969	Prpf6	100	98.725	ENSCAFG00000013165	PRPF6	100	98.725	Canis_familiaris
ENSMAUG00000013969	Prpf6	100	98.725	ENSCAFG00020002050	PRPF6	100	98.725	Canis_lupus_dingo
ENSMAUG00000013969	Prpf6	100	98.406	ENSCHIG00000018187	PRPF6	100	98.406	Capra_hircus
ENSMAUG00000013969	Prpf6	100	99.150	ENSTSYG00000007814	PRPF6	100	99.150	Carlito_syrichta
ENSMAUG00000013969	Prpf6	97	98.364	ENSCAPG00000015077	PRPF6	100	98.364	Cavia_aperea
ENSMAUG00000013969	Prpf6	100	99.681	ENSCPOG00000007518	PRPF6	100	99.681	Cavia_porcellus
ENSMAUG00000013969	Prpf6	100	95.218	ENSCCAG00000024564	PRPF6	100	95.218	Cebus_capucinus
ENSMAUG00000013969	Prpf6	100	98.193	ENSCATG00000037473	PRPF6	100	98.193	Cercocebus_atys
ENSMAUG00000013969	Prpf6	100	95.643	ENSCLAG00000003854	PRPF6	100	95.643	Chinchilla_lanigera
ENSMAUG00000013969	Prpf6	100	93.136	ENSCSAG00000016742	PRPF6	100	93.136	Chlorocebus_sabaeus
ENSMAUG00000013969	Prpf6	85	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSMAUG00000013969	Prpf6	100	98.193	ENSCPBG00000013964	PRPF6	96	98.193	Chrysemys_picta_bellii
ENSMAUG00000013969	Prpf6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSMAUG00000013969	Prpf6	100	98.193	ENSCANG00000038230	PRPF6	100	98.193	Colobus_angolensis_palliatus
ENSMAUG00000013969	Prpf6	100	99.894	ENSCGRG00001022666	Prpf6	100	99.894	Cricetulus_griseus_chok1gshd
ENSMAUG00000013969	Prpf6	100	87.354	ENSCSEG00000018561	prpf6	100	87.779	Cynoglossus_semilaevis
ENSMAUG00000013969	Prpf6	100	93.092	ENSCVAG00000010550	prpf6	96	93.518	Cyprinodon_variegatus
ENSMAUG00000013969	Prpf6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSMAUG00000013969	Prpf6	100	97.662	ENSDNOG00000040544	PRPF6	100	97.662	Dasypus_novemcinctus
ENSMAUG00000013969	Prpf6	91	98.364	ENSDORG00000005406	Prpf6	100	98.364	Dipodomys_ordii
ENSMAUG00000013969	Prpf6	99	72.013	FBgn0036828	CG6841	98	72.318	Drosophila_melanogaster
ENSMAUG00000013969	Prpf6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSMAUG00000013969	Prpf6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSMAUG00000013969	Prpf6	100	98.512	ENSEASG00005023115	PRPF6	100	98.512	Equus_asinus_asinus
ENSMAUG00000013969	Prpf6	100	94.261	ENSECAG00000013983	PRPF6	100	94.261	Equus_caballus
ENSMAUG00000013969	Prpf6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSMAUG00000013969	Prpf6	100	91.605	ENSELUG00000001945	prpf6	93	91.605	Esox_lucius
ENSMAUG00000013969	Prpf6	100	98.512	ENSFCAG00000001183	PRPF6	100	98.512	Felis_catus
ENSMAUG00000013969	Prpf6	100	98.087	ENSFALG00000010326	-	97	98.087	Ficedula_albicollis
ENSMAUG00000013969	Prpf6	100	90.436	ENSFALG00000006046	-	97	90.436	Ficedula_albicollis
ENSMAUG00000013969	Prpf6	100	98.193	ENSFDAG00000006451	PRPF6	100	99.660	Fukomys_damarensis
ENSMAUG00000013969	Prpf6	100	93.730	ENSFHEG00000000560	prpf6	96	93.730	Fundulus_heteroclitus
ENSMAUG00000013969	Prpf6	100	89.535	ENSGMOG00000015622	prpf6	99	89.535	Gadus_morhua
ENSMAUG00000013969	Prpf6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSMAUG00000013969	Prpf6	100	88.417	ENSGAFG00000021109	prpf6	96	88.842	Gambusia_affinis
ENSMAUG00000013969	Prpf6	100	91.605	ENSGACG00000002576	prpf6	99	91.605	Gasterosteus_aculeatus
ENSMAUG00000013969	Prpf6	100	98.087	ENSGAGG00000008653	PRPF6	96	98.087	Gopherus_agassizii
ENSMAUG00000013969	Prpf6	100	98.300	ENSGGOG00000016876	PRPF6	100	98.300	Gorilla_gorilla
ENSMAUG00000013969	Prpf6	100	92.774	ENSHBUG00000004496	prpf6	96	93.199	Haplochromis_burtoni
ENSMAUG00000013969	Prpf6	100	99.469	ENSHGLG00000009222	PRPF6	100	99.469	Heterocephalus_glaber_female
ENSMAUG00000013969	Prpf6	97	99.455	ENSHGLG00100016600	PRPF6	100	99.455	Heterocephalus_glaber_male
ENSMAUG00000013969	Prpf6	100	91.605	ENSHCOG00000011513	prpf6	96	92.030	Hippocampus_comes
ENSMAUG00000013969	Prpf6	100	93.836	ENSIPUG00000004912	prpf6	96	93.836	Ictalurus_punctatus
ENSMAUG00000013969	Prpf6	100	96.709	ENSSTOG00000002922	PRPF6	100	96.709	Ictidomys_tridecemlineatus
ENSMAUG00000013969	Prpf6	100	99.469	ENSJJAG00000000836	Prpf6	100	99.469	Jaculus_jaculus
ENSMAUG00000013969	Prpf6	100	92.561	ENSKMAG00000017800	prpf6	96	92.986	Kryptolebias_marmoratus
ENSMAUG00000013969	Prpf6	100	92.242	ENSLBEG00000012582	prpf6	96	92.242	Labrus_bergylta
ENSMAUG00000013969	Prpf6	100	94.793	ENSLOCG00000004827	prpf6	96	93.836	Lepisosteus_oculatus
ENSMAUG00000013969	Prpf6	100	97.981	ENSLAFG00000005272	PRPF6	100	97.981	Loxodonta_africana
ENSMAUG00000013969	Prpf6	100	98.193	ENSMFAG00000037542	PRPF6	100	98.193	Macaca_fascicularis
ENSMAUG00000013969	Prpf6	100	91.614	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSMAUG00000013969	Prpf6	100	83.898	ENSMNEG00000045555	PRPF6	100	83.898	Macaca_nemestrina
ENSMAUG00000013969	Prpf6	100	92.880	ENSMAMG00000010718	prpf6	96	93.305	Mastacembelus_armatus
ENSMAUG00000013969	Prpf6	100	92.251	ENSMZEG00005015261	-	99	92.675	Maylandia_zebra
ENSMAUG00000013969	Prpf6	94	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSMAUG00000013969	Prpf6	97	98.037	ENSMGAG00000006634	PRPF6	100	98.037	Meleagris_gallopavo
ENSMAUG00000013969	Prpf6	87	98.540	ENSMICG00000017793	PRPF6	99	98.540	Microcebus_murinus
ENSMAUG00000013969	Prpf6	100	99.894	ENSMOCG00000001701	Prpf6	100	99.894	Microtus_ochrogaster
ENSMAUG00000013969	Prpf6	100	91.923	ENSMMOG00000020419	prpf6	100	92.349	Mola_mola
ENSMAUG00000013969	Prpf6	99	98.767	ENSMODG00000017051	PRPF6	99	98.767	Monodelphis_domestica
ENSMAUG00000013969	Prpf6	99	93.018	ENSMALG00000000089	prpf6	100	93.018	Monopterus_albus
ENSMAUG00000013969	Prpf6	100	93.199	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSMAUG00000013969	Prpf6	100	99.894	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSMAUG00000013969	Prpf6	100	100.000	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSMAUG00000013969	Prpf6	100	99.894	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSMAUG00000013969	Prpf6	91	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSMAUG00000013969	Prpf6	100	99.787	ENSNGAG00000003365	Prpf6	100	99.787	Nannospalax_galili
ENSMAUG00000013969	Prpf6	100	92.880	ENSNBRG00000015025	prpf6	96	93.305	Neolamprologus_brichardi
ENSMAUG00000013969	Prpf6	100	98.193	ENSNLEG00000010208	PRPF6	100	98.193	Nomascus_leucogenys
ENSMAUG00000013969	Prpf6	100	88.735	ENSMEUG00000009824	-	90	88.735	Notamacropus_eugenii
ENSMAUG00000013969	Prpf6	100	93.624	ENSODEG00000004841	PRPF6	100	93.624	Octodon_degus
ENSMAUG00000013969	Prpf6	100	92.774	ENSONIG00000017406	prpf6	96	93.199	Oreochromis_niloticus
ENSMAUG00000013969	Prpf6	100	98.406	ENSOANG00000004920	PRPF6	100	98.406	Ornithorhynchus_anatinus
ENSMAUG00000013969	Prpf6	99	97.210	ENSOCUG00000014151	PRPF6	100	97.210	Oryctolagus_cuniculus
ENSMAUG00000013969	Prpf6	100	92.561	ENSORLG00000009592	prpf6	96	92.561	Oryzias_latipes
ENSMAUG00000013969	Prpf6	100	92.667	ENSORLG00020001458	prpf6	96	92.667	Oryzias_latipes_hni
ENSMAUG00000013969	Prpf6	100	92.667	ENSORLG00015018762	prpf6	96	92.667	Oryzias_latipes_hsok
ENSMAUG00000013969	Prpf6	100	92.561	ENSOMEG00000012174	prpf6	96	92.986	Oryzias_melastigma
ENSMAUG00000013969	Prpf6	100	91.401	ENSOGAG00000007573	PRPF6	100	91.401	Otolemur_garnettii
ENSMAUG00000013969	Prpf6	100	97.981	ENSOARG00000008776	PRPF6	99	97.981	Ovis_aries
ENSMAUG00000013969	Prpf6	100	98.300	ENSPPAG00000008686	PRPF6	100	98.300	Pan_paniscus
ENSMAUG00000013969	Prpf6	100	98.512	ENSPPRG00000008497	PRPF6	100	98.512	Panthera_pardus
ENSMAUG00000013969	Prpf6	97	98.473	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSMAUG00000013969	Prpf6	100	98.300	ENSPTRG00000013765	PRPF6	100	98.300	Pan_troglodytes
ENSMAUG00000013969	Prpf6	100	97.662	ENSPANG00000024135	PRPF6	100	97.662	Papio_anubis
ENSMAUG00000013969	Prpf6	100	94.368	ENSPKIG00000005627	prpf6	99	94.793	Paramormyrops_kingsleyae
ENSMAUG00000013969	Prpf6	94	98.299	ENSPSIG00000007717	PRPF6	100	98.299	Pelodiscus_sinensis
ENSMAUG00000013969	Prpf6	100	90.340	ENSPMGG00000008925	prpf6	96	90.552	Periophthalmus_magnuspinnatus
ENSMAUG00000013969	Prpf6	100	99.894	ENSPEMG00000016036	Prpf6	100	99.894	Peromyscus_maniculatus_bairdii
ENSMAUG00000013969	Prpf6	99	88.523	ENSPMAG00000006144	prpf6	99	88.523	Petromyzon_marinus
ENSMAUG00000013969	Prpf6	100	98.512	ENSPCIG00000017909	PRPF6	100	98.512	Phascolarctos_cinereus
ENSMAUG00000013969	Prpf6	100	93.305	ENSPFOG00000006431	prpf6	96	93.730	Poecilia_formosa
ENSMAUG00000013969	Prpf6	100	93.199	ENSPLAG00000005974	prpf6	96	93.624	Poecilia_latipinna
ENSMAUG00000013969	Prpf6	100	93.411	ENSPMEG00000009977	prpf6	96	93.836	Poecilia_mexicana
ENSMAUG00000013969	Prpf6	100	93.305	ENSPREG00000017993	prpf6	92	93.730	Poecilia_reticulata
ENSMAUG00000013969	Prpf6	100	97.768	ENSPPYG00000011256	PRPF6	100	97.768	Pongo_abelii
ENSMAUG00000013969	Prpf6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSMAUG00000013969	Prpf6	100	98.512	ENSPCOG00000016881	PRPF6	100	98.512	Propithecus_coquereli
ENSMAUG00000013969	Prpf6	100	92.667	ENSPVAG00000014316	PRPF6	100	92.667	Pteropus_vampyrus
ENSMAUG00000013969	Prpf6	100	76.327	ENSPNYG00000001939	prpf6	96	81.615	Pundamilia_nyererei
ENSMAUG00000013969	Prpf6	100	93.518	ENSPNAG00000015606	prpf6	96	93.943	Pygocentrus_nattereri
ENSMAUG00000013969	Prpf6	100	99.894	ENSRNOG00000051498	Prpf6	100	99.894	Rattus_norvegicus
ENSMAUG00000013969	Prpf6	100	98.193	ENSRBIG00000043613	PRPF6	100	98.193	Rhinopithecus_bieti
ENSMAUG00000013969	Prpf6	100	95.026	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSMAUG00000013969	Prpf6	91	95.398	ENSSBOG00000020632	PRPF6	91	95.398	Saimiri_boliviensis_boliviensis
ENSMAUG00000013969	Prpf6	100	98.512	ENSSHAG00000016810	PRPF6	100	98.512	Sarcophilus_harrisii
ENSMAUG00000013969	Prpf6	99	94.629	ENSSFOG00015020859	prpf6	100	95.059	Scleropages_formosus
ENSMAUG00000013969	Prpf6	100	92.136	ENSSMAG00000008112	prpf6	96	92.136	Scophthalmus_maximus
ENSMAUG00000013969	Prpf6	100	92.774	ENSSDUG00000016142	prpf6	96	93.199	Seriola_dumerili
ENSMAUG00000013969	Prpf6	100	92.774	ENSSLDG00000025283	prpf6	100	89.692	Seriola_lalandi_dorsalis
ENSMAUG00000013969	Prpf6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSMAUG00000013969	Prpf6	100	92.774	ENSSPAG00000015850	prpf6	96	93.199	Stegastes_partitus
ENSMAUG00000013969	Prpf6	100	98.406	ENSSSCG00000029119	PRPF6	100	98.299	Sus_scrofa
ENSMAUG00000013969	Prpf6	100	98.193	ENSTGUG00000007221	PRPF6	99	98.193	Taeniopygia_guttata
ENSMAUG00000013969	Prpf6	100	91.711	ENSTRUG00000002920	prpf6	96	92.136	Takifugu_rubripes
ENSMAUG00000013969	Prpf6	100	85.412	ENSTNIG00000017873	prpf6	100	85.835	Tetraodon_nigroviridis
ENSMAUG00000013969	Prpf6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSMAUG00000013969	Prpf6	100	97.875	ENSTTRG00000013068	PRPF6	100	97.875	Tursiops_truncatus
ENSMAUG00000013969	Prpf6	98	96.957	ENSUMAG00000021631	PRPF6	98	96.957	Ursus_maritimus
ENSMAUG00000013969	Prpf6	100	98.725	ENSVVUG00000014948	PRPF6	100	98.725	Vulpes_vulpes
ENSMAUG00000013969	Prpf6	100	96.493	ENSXETG00000012054	prpf6	97	96.493	Xenopus_tropicalis
ENSMAUG00000013969	Prpf6	100	93.411	ENSXCOG00000008082	prpf6	96	93.836	Xiphophorus_couchianus
ENSMAUG00000013969	Prpf6	100	93.411	ENSXMAG00000015581	prpf6	96	93.836	Xiphophorus_maculatus