EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000014032 (Gene tree)
Gene ID: 101825056
Gene Symbol: Pabpn1l
Alias: LOC382035|ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 3298 bases
Position: chrKB708164.1:15593114-15596411
Accession: 101825056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000014195	RRM_1	PF00076.22	4.6e-15	1	1
ENSMAUP00000014200	RRM_1	PF00076.22	5.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000018110	-	810	XM_005073135	ENSMAUP00000014195	269 (aa)	XP_005073192	-
ENSMAUT00000018115	-	1046	-	ENSMAUP00000014200	263 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000014032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000014032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000014032	Pabpn1l	51	55.245	ENSMAUG00000007383	Gm20521	64	47.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000014032	Pabpn1l	100	67.790	ENSG00000205022	PABPN1L	100	67.986	Homo_sapiens
ENSMAUG00000014032	Pabpn1l	55	54.667	ENSAPOG00000000685	PABPN1L	65	47.805	Acanthochromis_polyacanthus
ENSMAUG00000014032	Pabpn1l	55	53.691	ENSACIG00000021400	PABPN1L	83	53.691	Amphilophus_citrinellus
ENSMAUG00000014032	Pabpn1l	54	55.782	ENSATEG00000011646	PABPN1L	71	50.543	Anabas_testudineus
ENSMAUG00000014032	Pabpn1l	73	55.612	ENSACAG00000013250	PABPN1L	100	55.612	Anolis_carolinensis
ENSMAUG00000014032	Pabpn1l	100	66.426	ENSANAG00000038178	PABPN1L	100	67.754	Aotus_nancymaae
ENSMAUG00000014032	Pabpn1l	55	53.020	ENSACLG00000025147	PABPN1L	73	47.980	Astatotilapia_calliptera
ENSMAUG00000014032	Pabpn1l	61	53.125	ENSAMXG00000010873	PABPN1L	62	53.939	Astyanax_mexicanus
ENSMAUG00000014032	Pabpn1l	61	66.258	ENSBTAG00000006727	-	99	66.258	Bos_taurus
ENSMAUG00000014032	Pabpn1l	100	62.007	ENSBTAG00000023752	-	100	62.366	Bos_taurus
ENSMAUG00000014032	Pabpn1l	100	65.530	ENSCJAG00000045284	PABPN1L	100	64.855	Callithrix_jacchus
ENSMAUG00000014032	Pabpn1l	100	59.489	ENSCHIG00000013987	PABPN1L	100	58.188	Capra_hircus
ENSMAUG00000014032	Pabpn1l	99	63.569	ENSCAPG00000007240	PABPN1L	100	63.670	Cavia_aperea
ENSMAUG00000014032	Pabpn1l	100	66.300	ENSCPOG00000025951	PABPN1L	100	65.568	Cavia_porcellus
ENSMAUG00000014032	Pabpn1l	100	65.909	ENSCCAG00000027631	PABPN1L	100	65.580	Cebus_capucinus
ENSMAUG00000014032	Pabpn1l	100	69.202	ENSCATG00000031060	PABPN1L	100	69.455	Cercocebus_atys
ENSMAUG00000014032	Pabpn1l	100	68.382	ENSCLAG00000000704	PABPN1L	100	67.766	Chinchilla_lanigera
ENSMAUG00000014032	Pabpn1l	100	67.354	ENSCSAG00000002881	PABPN1L	100	66.667	Chlorocebus_sabaeus
ENSMAUG00000014032	Pabpn1l	72	54.082	ENSCPBG00000023441	PABPN1L	61	55.276	Chrysemys_picta_bellii
ENSMAUG00000014032	Pabpn1l	100	66.667	ENSCANG00000039336	PABPN1L	100	65.942	Colobus_angolensis_palliatus
ENSMAUG00000014032	Pabpn1l	100	92.395	ENSCGRG00001013211	Pabpn1l	100	90.182	Cricetulus_griseus_chok1gshd
ENSMAUG00000014032	Pabpn1l	100	92.395	ENSCGRG00000015868	Pabpn1l	100	90.182	Cricetulus_griseus_crigri
ENSMAUG00000014032	Pabpn1l	100	56.071	ENSDNOG00000034677	PABPN1L	100	57.143	Dasypus_novemcinctus
ENSMAUG00000014032	Pabpn1l	100	65.934	ENSEASG00005000777	PABPN1L	100	65.568	Equus_asinus_asinus
ENSMAUG00000014032	Pabpn1l	100	66.667	ENSECAG00000000378	PABPN1L	100	66.300	Equus_caballus
ENSMAUG00000014032	Pabpn1l	100	60.223	ENSEEUG00000004747	PABPN1L	100	59.851	Erinaceus_europaeus
ENSMAUG00000014032	Pabpn1l	67	49.718	ENSELUG00000018385	PABPN1L	66	52.247	Esox_lucius
ENSMAUG00000014032	Pabpn1l	100	65.233	ENSFCAG00000010465	PABPN1L	100	65.233	Felis_catus
ENSMAUG00000014032	Pabpn1l	77	52.657	ENSFALG00000003319	PABPN1L	82	51.905	Ficedula_albicollis
ENSMAUG00000014032	Pabpn1l	100	68.015	ENSFDAG00000021067	PABPN1L	100	67.279	Fukomys_damarensis
ENSMAUG00000014032	Pabpn1l	55	59.732	ENSGALG00000006242	PABPN1L	85	59.732	Gallus_gallus
ENSMAUG00000014032	Pabpn1l	68	55.556	ENSGAGG00000010613	PABPN1L	59	55.556	Gopherus_agassizii
ENSMAUG00000014032	Pabpn1l	100	68.821	ENSGGOG00000012670	PABPN1L	100	70.545	Gorilla_gorilla
ENSMAUG00000014032	Pabpn1l	55	53.020	ENSHBUG00000002388	PABPN1L	73	46.465	Haplochromis_burtoni
ENSMAUG00000014032	Pabpn1l	100	67.300	ENSHGLG00000014207	PABPN1L	100	68.462	Heterocephalus_glaber_female
ENSMAUG00000014032	Pabpn1l	100	67.300	ENSHGLG00100005230	PABPN1L	100	68.462	Heterocephalus_glaber_male
ENSMAUG00000014032	Pabpn1l	60	50.932	ENSHCOG00000004151	PABPN1L	60	52.071	Hippocampus_comes
ENSMAUG00000014032	Pabpn1l	99	68.561	ENSSTOG00000020814	PABPN1L	100	66.308	Ictidomys_tridecemlineatus
ENSMAUG00000014032	Pabpn1l	100	72.364	ENSJJAG00000006433	Pabpn1l	100	72.000	Jaculus_jaculus
ENSMAUG00000014032	Pabpn1l	67	46.591	ENSLBEG00000011647	PABPN1L	60	50.299	Labrus_bergylta
ENSMAUG00000014032	Pabpn1l	72	64.286	ENSLAFG00000025902	-	78	64.286	Loxodonta_africana
ENSMAUG00000014032	Pabpn1l	100	68.441	ENSMFAG00000002924	PABPN1L	100	68.727	Macaca_fascicularis
ENSMAUG00000014032	Pabpn1l	100	68.441	ENSMMUG00000012438	PABPN1L	100	68.727	Macaca_mulatta
ENSMAUG00000014032	Pabpn1l	100	68.441	ENSMNEG00000044808	PABPN1L	100	68.727	Macaca_nemestrina
ENSMAUG00000014032	Pabpn1l	100	68.821	ENSMLEG00000032667	PABPN1L	100	69.091	Mandrillus_leucophaeus
ENSMAUG00000014032	Pabpn1l	55	53.020	ENSMZEG00005002186	PABPN1L	73	47.980	Maylandia_zebra
ENSMAUG00000014032	Pabpn1l	100	68.000	ENSMICG00000028179	PABPN1L	100	67.273	Microcebus_murinus
ENSMAUG00000014032	Pabpn1l	100	84.411	ENSMOCG00000007955	Pabpn1l	100	83.026	Microtus_ochrogaster
ENSMAUG00000014032	Pabpn1l	100	56.410	ENSMODG00000003873	-	100	56.410	Monodelphis_domestica
ENSMAUG00000014032	Pabpn1l	63	50.303	ENSMALG00000016926	PABPN1L	73	47.716	Monopterus_albus
ENSMAUG00000014032	Pabpn1l	100	80.989	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	79.273	Mus_caroli
ENSMAUG00000014032	Pabpn1l	100	80.228	ENSMUSG00000069867	Pabpn1l	100	78.545	Mus_musculus
ENSMAUG00000014032	Pabpn1l	100	80.228	MGP_PahariEiJ_G0023268	Pabpn1l	100	78.909	Mus_pahari
ENSMAUG00000014032	Pabpn1l	100	80.989	MGP_SPRETEiJ_G0032788	Pabpn1l	100	78.909	Mus_spretus
ENSMAUG00000014032	Pabpn1l	97	48.736	ENSMLUG00000003228	PABPN1L	97	48.736	Myotis_lucifugus
ENSMAUG00000014032	Pabpn1l	100	82.129	ENSNGAG00000023992	Pabpn1l	100	80.515	Nannospalax_galili
ENSMAUG00000014032	Pabpn1l	55	53.020	ENSNBRG00000017078	PABPN1L	75	48.087	Neolamprologus_brichardi
ENSMAUG00000014032	Pabpn1l	100	68.939	ENSOPRG00000005597	PABPN1L	100	68.864	Ochotona_princeps
ENSMAUG00000014032	Pabpn1l	100	60.976	ENSODEG00000004649	PABPN1L	100	60.976	Octodon_degus
ENSMAUG00000014032	Pabpn1l	100	54.373	ENSOANG00000013901	PABPN1L	100	54.579	Ornithorhynchus_anatinus
ENSMAUG00000014032	Pabpn1l	72	46.667	ENSORLG00000026560	PABPN1L	73	46.667	Oryzias_latipes
ENSMAUG00000014032	Pabpn1l	72	46.667	ENSORLG00020015068	PABPN1L	73	46.667	Oryzias_latipes_hni
ENSMAUG00000014032	Pabpn1l	72	46.667	ENSORLG00015000397	PABPN1L	73	46.667	Oryzias_latipes_hsok
ENSMAUG00000014032	Pabpn1l	78	45.238	ENSOMEG00000017896	PABPN1L	52	47.000	Oryzias_melastigma
ENSMAUG00000014032	Pabpn1l	100	66.920	ENSOGAG00000000433	PABPN1L	100	66.545	Otolemur_garnettii
ENSMAUG00000014032	Pabpn1l	100	60.726	ENSOARG00000013682	PABPN1L	100	61.056	Ovis_aries
ENSMAUG00000014032	Pabpn1l	100	68.539	ENSPPAG00000028866	PABPN1L	100	68.345	Pan_paniscus
ENSMAUG00000014032	Pabpn1l	100	64.516	ENSPPRG00000015106	PABPN1L	100	64.516	Panthera_pardus
ENSMAUG00000014032	Pabpn1l	97	60.311	ENSPTIG00000015606	PABPN1L	100	59.922	Panthera_tigris_altaica
ENSMAUG00000014032	Pabpn1l	100	68.539	ENSPTRG00000031120	PABPN1L	100	68.345	Pan_troglodytes
ENSMAUG00000014032	Pabpn1l	100	68.441	ENSPANG00000026039	PABPN1L	100	69.091	Papio_anubis
ENSMAUG00000014032	Pabpn1l	72	53.535	ENSPSIG00000003404	PABPN1L	100	54.229	Pelodiscus_sinensis
ENSMAUG00000014032	Pabpn1l	51	55.970	ENSPMGG00000013927	PABPN1L	59	65.000	Periophthalmus_magnuspinnatus
ENSMAUG00000014032	Pabpn1l	100	84.758	ENSPEMG00000016624	Pabpn1l	100	84.758	Peromyscus_maniculatus_bairdii
ENSMAUG00000014032	Pabpn1l	53	66.438	ENSPCIG00000007038	-	99	66.438	Phascolarctos_cinereus
ENSMAUG00000014032	Pabpn1l	100	68.421	ENSPPYG00000007655	PABPN1L	100	68.705	Pongo_abelii
ENSMAUG00000014032	Pabpn1l	100	68.821	ENSPCOG00000024077	PABPN1L	100	68.364	Propithecus_coquereli
ENSMAUG00000014032	Pabpn1l	100	64.815	ENSPVAG00000002716	PABPN1L	100	63.121	Pteropus_vampyrus
ENSMAUG00000014032	Pabpn1l	55	53.020	ENSPNYG00000004803	PABPN1L	73	47.980	Pundamilia_nyererei
ENSMAUG00000014032	Pabpn1l	100	81.919	ENSRNOG00000029558	Pabpn1l	100	81.919	Rattus_norvegicus
ENSMAUG00000014032	Pabpn1l	100	69.582	ENSRBIG00000030740	PABPN1L	100	69.818	Rhinopithecus_bieti
ENSMAUG00000014032	Pabpn1l	100	67.681	ENSRROG00000035483	-	99	67.883	Rhinopithecus_roxellana
ENSMAUG00000014032	Pabpn1l	100	69.203	ENSRROG00000032240	-	100	69.091	Rhinopithecus_roxellana
ENSMAUG00000014032	Pabpn1l	100	66.667	ENSSBOG00000018410	PABPN1L	100	65.942	Saimiri_boliviensis_boliviensis
ENSMAUG00000014032	Pabpn1l	100	53.287	ENSSHAG00000010001	-	100	51.568	Sarcophilus_harrisii
ENSMAUG00000014032	Pabpn1l	55	55.034	ENSSMAG00000021348	PABPN1L	73	47.264	Scophthalmus_maximus
ENSMAUG00000014032	Pabpn1l	89	54.468	ENSSARG00000005178	-	92	55.459	Sorex_araneus
ENSMAUG00000014032	Pabpn1l	71	55.959	ENSSPUG00000007031	PABPN1L	86	55.556	Sphenodon_punctatus
ENSMAUG00000014032	Pabpn1l	54	54.054	ENSSPAG00000017978	PABPN1L	73	46.667	Stegastes_partitus
ENSMAUG00000014032	Pabpn1l	100	65.480	ENSSSCG00000036367	PABPN1L	100	66.052	Sus_scrofa
ENSMAUG00000014032	Pabpn1l	67	47.458	ENSTRUG00000024725	PABPN1L	71	48.023	Takifugu_rubripes
ENSMAUG00000014032	Pabpn1l	100	62.590	ENSTTRG00000004691	PABPN1L	100	64.158	Tursiops_truncatus
ENSMAUG00000014032	Pabpn1l	56	51.572	ENSXETG00000011258	pabpn1l	89	47.549	Xenopus_tropicalis