EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000014064 (Gene tree)
Gene ID: 101841131
Gene Symbol: Sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 13669 bases
Position: chrKB708127.1:50749222-50762890
Accession: 101841131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000014247	KH_1	PF00013.29	2.1e-07	1	1
ENSMAUP00000014242	KH_1	PF00013.29	2.4e-07	1	1
ENSMAUP00000014247	zf-CCHC	PF00098.23	0.00013	1	1
ENSMAUP00000014242	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000018157	-	3001	XM_005063936	ENSMAUP00000014242	638 (aa)	XP_005063993	A0A1U7Q2U0
ENSMAUT00000018163	-	2798	XM_005063938	ENSMAUP00000014247	571 (aa)	XP_005063995	A0A1U7Q4V8

Gene Model

Click here to download ENSMAUG00000014064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000014064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000014064	Sf1	66	80.928	ENSAPOG00000012341	sf1	60	76.047	Acanthochromis_polyacanthus
ENSMAUG00000014064	Sf1	99	90.980	ENSAMEG00000017828	SF1	83	99.250	Ailuropoda_melanoleuca
ENSMAUG00000014064	Sf1	65	83.245	ENSACIG00000016514	sf1	62	78.282	Amphilophus_citrinellus
ENSMAUG00000014064	Sf1	66	80.412	ENSAOCG00000010934	sf1	61	76.047	Amphiprion_ocellaris
ENSMAUG00000014064	Sf1	66	80.412	ENSAPEG00000009498	sf1	61	76.047	Amphiprion_percula
ENSMAUG00000014064	Sf1	65	82.105	ENSATEG00000001894	sf1	60	77.488	Anabas_testudineus
ENSMAUG00000014064	Sf1	92	87.692	ENSANAG00000022607	-	97	86.905	Aotus_nancymaae
ENSMAUG00000014064	Sf1	100	99.060	ENSANAG00000026664	-	100	99.060	Aotus_nancymaae
ENSMAUG00000014064	Sf1	64	84.824	ENSACLG00000007633	sf1	60	78.973	Astatotilapia_calliptera
ENSMAUG00000014064	Sf1	64	86.096	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSMAUG00000014064	Sf1	94	99.165	ENSBTAG00000001035	SF1	94	99.165	Bos_taurus
ENSMAUG00000014064	Sf1	100	99.216	ENSCJAG00000002780	SF1	100	99.216	Callithrix_jacchus
ENSMAUG00000014064	Sf1	100	99.216	ENSCAFG00000014239	SF1	100	99.216	Canis_familiaris
ENSMAUG00000014064	Sf1	100	99.216	ENSCAFG00020014381	SF1	100	99.216	Canis_lupus_dingo
ENSMAUG00000014064	Sf1	94	99.165	ENSCHIG00000025867	SF1	97	99.055	Capra_hircus
ENSMAUG00000014064	Sf1	53	98.566	ENSTSYG00000033618	SF1	88	100.000	Carlito_syrichta
ENSMAUG00000014064	Sf1	98	97.143	ENSCAPG00000010762	SF1	100	97.143	Cavia_aperea
ENSMAUG00000014064	Sf1	98	98.724	ENSCPOG00000012290	SF1	100	98.724	Cavia_porcellus
ENSMAUG00000014064	Sf1	100	99.216	ENSCCAG00000037881	SF1	100	99.216	Cebus_capucinus
ENSMAUG00000014064	Sf1	89	84.764	ENSCCAG00000023781	-	94	84.629	Cebus_capucinus
ENSMAUG00000014064	Sf1	100	99.216	ENSCATG00000011564	SF1	100	99.216	Cercocebus_atys
ENSMAUG00000014064	Sf1	83	99.055	ENSCSAG00000007258	SF1	97	99.055	Chlorocebus_sabaeus
ENSMAUG00000014064	Sf1	72	92.961	ENSCHOG00000006008	SF1	79	93.062	Choloepus_hoffmanni
ENSMAUG00000014064	Sf1	81	86.293	ENSCPBG00000023763	SF1	66	84.942	Chrysemys_picta_bellii
ENSMAUG00000014064	Sf1	54	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSMAUG00000014064	Sf1	90	47.245	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSMAUG00000014064	Sf1	100	99.216	ENSCANG00000042201	SF1	100	99.216	Colobus_angolensis_palliatus
ENSMAUG00000014064	Sf1	100	99.650	ENSCGRG00001003677	Sf1	100	99.650	Cricetulus_griseus_chok1gshd
ENSMAUG00000014064	Sf1	98	99.643	ENSCGRG00000001708	Sf1	100	99.643	Cricetulus_griseus_crigri
ENSMAUG00000014064	Sf1	69	78.818	ENSCSEG00000014375	sf1	57	76.077	Cynoglossus_semilaevis
ENSMAUG00000014064	Sf1	65	84.865	ENSCVAG00000001670	sf1	63	78.729	Cyprinodon_variegatus
ENSMAUG00000014064	Sf1	70	81.638	ENSDARG00000008188	sf1	72	79.021	Danio_rerio
ENSMAUG00000014064	Sf1	83	98.488	ENSDNOG00000001282	SF1	97	98.488	Dasypus_novemcinctus
ENSMAUG00000014064	Sf1	100	99.216	ENSDORG00000016334	Sf1	100	99.216	Dipodomys_ordii
ENSMAUG00000014064	Sf1	87	91.712	ENSETEG00000012830	SF1	82	90.940	Echinops_telfairi
ENSMAUG00000014064	Sf1	83	98.677	ENSEASG00005018272	SF1	97	98.677	Equus_asinus_asinus
ENSMAUG00000014064	Sf1	83	98.866	ENSECAG00000024544	SF1	97	98.866	Equus_caballus
ENSMAUG00000014064	Sf1	69	98.473	ENSEEUG00000001058	SF1	100	98.473	Erinaceus_europaeus
ENSMAUG00000014064	Sf1	65	81.963	ENSELUG00000013225	sf1	54	79.426	Esox_lucius
ENSMAUG00000014064	Sf1	100	99.216	ENSFCAG00000012231	SF1	100	99.216	Felis_catus
ENSMAUG00000014064	Sf1	98	97.321	ENSFDAG00000009833	SF1	100	97.321	Fukomys_damarensis
ENSMAUG00000014064	Sf1	66	80.670	ENSFHEG00000022656	sf1	61	76.334	Fundulus_heteroclitus
ENSMAUG00000014064	Sf1	66	84.416	ENSGAFG00000019284	sf1	78	80.476	Gambusia_affinis
ENSMAUG00000014064	Sf1	67	80.759	ENSGACG00000000826	sf1	68	77.014	Gasterosteus_aculeatus
ENSMAUG00000014064	Sf1	74	89.387	ENSGAGG00000021691	SF1	72	84.942	Gopherus_agassizii
ENSMAUG00000014064	Sf1	65	83.421	ENSHBUG00000011598	sf1	61	75.973	Haplochromis_burtoni
ENSMAUG00000014064	Sf1	100	99.060	ENSHGLG00000009541	SF1	100	99.060	Heterocephalus_glaber_female
ENSMAUG00000014064	Sf1	68	88.736	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSMAUG00000014064	Sf1	76	86.222	ENSHGLG00100008255	-	94	85.714	Heterocephalus_glaber_male
ENSMAUG00000014064	Sf1	98	97.321	ENSHGLG00100013879	-	100	97.321	Heterocephalus_glaber_male
ENSMAUG00000014064	Sf1	66	81.606	ENSHCOG00000011388	sf1	58	76.998	Hippocampus_comes
ENSMAUG00000014064	Sf1	98	81.673	ENSSTOG00000024353	-	98	82.562	Ictidomys_tridecemlineatus
ENSMAUG00000014064	Sf1	98	99.362	ENSSTOG00000009790	-	100	99.362	Ictidomys_tridecemlineatus
ENSMAUG00000014064	Sf1	100	99.530	ENSJJAG00000011788	Sf1	100	99.530	Jaculus_jaculus
ENSMAUG00000014064	Sf1	67	82.908	ENSKMAG00000005854	sf1	63	77.518	Kryptolebias_marmoratus
ENSMAUG00000014064	Sf1	65	83.246	ENSLBEG00000019836	sf1	64	78.469	Labrus_bergylta
ENSMAUG00000014064	Sf1	73	78.333	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSMAUG00000014064	Sf1	65	85.146	ENSLOCG00000002130	sf1	59	80.049	Lepisosteus_oculatus
ENSMAUG00000014064	Sf1	99	94.884	ENSLAFG00000007201	SF1	100	94.884	Loxodonta_africana
ENSMAUG00000014064	Sf1	100	99.216	ENSMFAG00000033122	SF1	100	99.216	Macaca_fascicularis
ENSMAUG00000014064	Sf1	100	99.216	ENSMMUG00000022606	SF1	100	99.216	Macaca_mulatta
ENSMAUG00000014064	Sf1	100	95.137	ENSMNEG00000037901	SF1	100	95.137	Macaca_nemestrina
ENSMAUG00000014064	Sf1	98	99.204	ENSMLEG00000040706	SF1	95	99.204	Mandrillus_leucophaeus
ENSMAUG00000014064	Sf1	66	81.347	ENSMAMG00000001780	sf1	58	78.208	Mastacembelus_armatus
ENSMAUG00000014064	Sf1	65	83.158	ENSMZEG00005009196	sf1	61	75.744	Maylandia_zebra
ENSMAUG00000014064	Sf1	100	99.216	ENSMICG00000001202	SF1	100	99.216	Microcebus_murinus
ENSMAUG00000014064	Sf1	100	99.687	ENSMOCG00000022038	Sf1	100	99.687	Microtus_ochrogaster
ENSMAUG00000014064	Sf1	65	81.720	ENSMMOG00000020474	sf1	60	77.053	Mola_mola
ENSMAUG00000014064	Sf1	75	97.658	ENSMODG00000029407	SF1	97	94.183	Monodelphis_domestica
ENSMAUG00000014064	Sf1	65	83.422	ENSMALG00000020521	sf1	68	76.596	Monopterus_albus
ENSMAUG00000014064	Sf1	100	99.687	MGP_CAROLIEiJ_G0022607	Sf1	100	100.000	Mus_caroli
ENSMAUG00000014064	Sf1	100	99.687	ENSMUSG00000024949	Sf1	100	100.000	Mus_musculus
ENSMAUG00000014064	Sf1	100	99.530	MGP_PahariEiJ_G0014101	Sf1	100	100.000	Mus_pahari
ENSMAUG00000014064	Sf1	100	99.687	MGP_SPRETEiJ_G0023518	Sf1	100	100.000	Mus_spretus
ENSMAUG00000014064	Sf1	93	98.985	ENSMPUG00000012684	SF1	92	98.985	Mustela_putorius_furo
ENSMAUG00000014064	Sf1	93	98.816	ENSMLUG00000015217	-	92	98.816	Myotis_lucifugus
ENSMAUG00000014064	Sf1	79	93.348	ENSMLUG00000029800	-	78	94.273	Myotis_lucifugus
ENSMAUG00000014064	Sf1	100	99.216	ENSNGAG00000005550	Sf1	100	99.216	Nannospalax_galili
ENSMAUG00000014064	Sf1	65	84.225	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSMAUG00000014064	Sf1	100	99.060	ENSNLEG00000005236	-	100	99.060	Nomascus_leucogenys
ENSMAUG00000014064	Sf1	80	98.051	ENSMEUG00000013424	SF1	97	98.051	Notamacropus_eugenii
ENSMAUG00000014064	Sf1	74	98.526	ENSOPRG00000005008	SF1	96	98.526	Ochotona_princeps
ENSMAUG00000014064	Sf1	100	88.906	ENSODEG00000006102	-	100	87.057	Octodon_degus
ENSMAUG00000014064	Sf1	65	82.895	ENSONIG00000015728	sf1	61	75.515	Oreochromis_niloticus
ENSMAUG00000014064	Sf1	62	87.151	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSMAUG00000014064	Sf1	99	99.048	ENSOCUG00000026486	SF1	100	99.048	Oryctolagus_cuniculus
ENSMAUG00000014064	Sf1	67	81.074	ENSORLG00000011853	sf1	58	77.458	Oryzias_latipes
ENSMAUG00000014064	Sf1	68	79.750	ENSORLG00020011834	sf1	60	76.291	Oryzias_latipes_hni
ENSMAUG00000014064	Sf1	65	80.890	ENSORLG00015012855	sf1	59	76.978	Oryzias_latipes_hsok
ENSMAUG00000014064	Sf1	67	80.051	ENSOMEG00000005210	sf1	61	75.587	Oryzias_melastigma
ENSMAUG00000014064	Sf1	100	99.060	ENSOGAG00000016196	SF1	100	99.060	Otolemur_garnettii
ENSMAUG00000014064	Sf1	83	94.585	ENSOARG00000009166	SF1	82	99.358	Ovis_aries
ENSMAUG00000014064	Sf1	99	94.462	ENSPPAG00000002799	-	96	98.753	Pan_paniscus
ENSMAUG00000014064	Sf1	98	99.203	ENSPPRG00000013566	SF1	98	99.203	Panthera_pardus
ENSMAUG00000014064	Sf1	99	89.558	ENSPTIG00000016141	SF1	99	88.307	Panthera_tigris_altaica
ENSMAUG00000014064	Sf1	100	99.216	ENSPTRG00000003846	SF1	100	99.216	Pan_troglodytes
ENSMAUG00000014064	Sf1	100	95.137	ENSPANG00000020754	SF1	97	99.055	Papio_anubis
ENSMAUG00000014064	Sf1	58	78.529	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSMAUG00000014064	Sf1	56	87.812	ENSPSIG00000003610	SF1	84	82.710	Pelodiscus_sinensis
ENSMAUG00000014064	Sf1	100	99.843	ENSPEMG00000010463	Sf1	100	99.843	Peromyscus_maniculatus_bairdii
ENSMAUG00000014064	Sf1	59	72.321	ENSPMAG00000008272	sf1	53	67.027	Petromyzon_marinus
ENSMAUG00000014064	Sf1	100	97.806	ENSPCIG00000018173	SF1	100	97.806	Phascolarctos_cinereus
ENSMAUG00000014064	Sf1	66	86.280	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSMAUG00000014064	Sf1	65	84.392	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSMAUG00000014064	Sf1	65	84.392	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSMAUG00000014064	Sf1	65	83.465	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSMAUG00000014064	Sf1	100	99.060	ENSPPYG00000003098	-	100	99.060	Pongo_abelii
ENSMAUG00000014064	Sf1	82	97.338	ENSPCAG00000013631	SF1	78	97.338	Procavia_capensis
ENSMAUG00000014064	Sf1	100	99.060	ENSPCOG00000027546	SF1	100	99.060	Propithecus_coquereli
ENSMAUG00000014064	Sf1	82	97.338	ENSPVAG00000016938	SF1	79	97.338	Pteropus_vampyrus
ENSMAUG00000014064	Sf1	65	83.158	ENSPNYG00000004673	sf1	59	76.869	Pundamilia_nyererei
ENSMAUG00000014064	Sf1	65	85.450	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSMAUG00000014064	Sf1	94	99.499	ENSRNOG00000021085	Sf1	94	99.499	Rattus_norvegicus
ENSMAUG00000014064	Sf1	100	95.141	ENSRBIG00000042818	SF1	100	95.141	Rhinopithecus_bieti
ENSMAUG00000014064	Sf1	100	95.447	ENSRROG00000045655	SF1	98	97.843	Rhinopithecus_roxellana
ENSMAUG00000014064	Sf1	51	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSMAUG00000014064	Sf1	93	78.759	ENSSBOG00000022267	-	99	81.010	Saimiri_boliviensis_boliviensis
ENSMAUG00000014064	Sf1	71	91.707	ENSSHAG00000006841	SF1	75	92.927	Sarcophilus_harrisii
ENSMAUG00000014064	Sf1	69	80.702	ENSSFOG00015021978	sf1	55	77.295	Scleropages_formosus
ENSMAUG00000014064	Sf1	72	76.815	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSMAUG00000014064	Sf1	66	80.720	ENSSDUG00000003903	sf1	63	76.636	Seriola_dumerili
ENSMAUG00000014064	Sf1	66	80.720	ENSSLDG00000013075	sf1	61	76.636	Seriola_lalandi_dorsalis
ENSMAUG00000014064	Sf1	81	95.164	ENSSARG00000008180	SF1	100	95.164	Sorex_araneus
ENSMAUG00000014064	Sf1	79	82.567	ENSSPUG00000012907	SF1	86	81.034	Sphenodon_punctatus
ENSMAUG00000014064	Sf1	66	80.412	ENSSPAG00000019060	sf1	61	74.828	Stegastes_partitus
ENSMAUG00000014064	Sf1	100	99.060	ENSSSCG00000013021	SF1	100	99.060	Sus_scrofa
ENSMAUG00000014064	Sf1	84	62.983	ENSTNIG00000004820	sf1	80	70.258	Tetraodon_nigroviridis
ENSMAUG00000014064	Sf1	72	92.358	ENSTBEG00000013133	SF1	66	92.325	Tupaia_belangeri
ENSMAUG00000014064	Sf1	81	95.174	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSMAUG00000014064	Sf1	75	96.674	ENSUAMG00000011977	SF1	95	94.165	Ursus_americanus
ENSMAUG00000014064	Sf1	99	88.421	ENSUMAG00000007268	SF1	90	98.182	Ursus_maritimus
ENSMAUG00000014064	Sf1	60	99.598	ENSVPAG00000011912	SF1	66	99.598	Vicugna_pacos
ENSMAUG00000014064	Sf1	83	99.055	ENSVVUG00000028585	SF1	97	99.055	Vulpes_vulpes
ENSMAUG00000014064	Sf1	93	68.689	ENSXETG00000008434	sf1	68	81.311	Xenopus_tropicalis
ENSMAUG00000014064	Sf1	64	85.753	ENSXCOG00000003704	sf1	75	81.188	Xiphophorus_couchianus
ENSMAUG00000014064	Sf1	65	83.905	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus