EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000015005 (Gene tree)
Gene ID: 101833039
Gene Symbol: Rab5c
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 22419 bases
Position: chrKB708394.1:786350-808768
Accession: 101833039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000015600	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000019527	-	1738	XM_005087394	ENSMAUP00000015600	216 (aa)	XP_005087451	A0A1U7R754

Gene Model

Click here to download ENSMAUG00000015005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000015005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000015005	Rab5c	73	31.875	ENSMAUG00000017730	Rab34	62	31.875
ENSMAUG00000015005	Rab5c	89	43.077	ENSMAUG00000012156	Rab1a	95	43.077
ENSMAUG00000015005	Rab5c	75	40.361	ENSMAUG00000014025	Rab33a	70	40.361
ENSMAUG00000015005	Rab5c	90	42.029	ENSMAUG00000018551	Rab11a	94	42.029
ENSMAUG00000015005	Rab5c	71	36.601	ENSMAUG00000010955	Rabl2	67	36.601
ENSMAUG00000015005	Rab5c	89	42.439	ENSMAUG00000021579	Rab11b	94	42.439
ENSMAUG00000015005	Rab5c	88	33.673	ENSMAUG00000020223	Rab42	90	33.673
ENSMAUG00000015005	Rab5c	82	39.888	ENSMAUG00000020698	-	94	39.888
ENSMAUG00000015005	Rab5c	91	46.429	ENSMAUG00000012455	Rab31	98	46.429
ENSMAUG00000015005	Rab5c	78	33.728	ENSMAUG00000015974	-	77	33.728
ENSMAUG00000015005	Rab5c	55	31.967	ENSMAUG00000016691	Arl8b	62	31.967
ENSMAUG00000015005	Rab5c	77	32.934	ENSMAUG00000017232	Kras	95	30.387
ENSMAUG00000015005	Rab5c	93	38.350	ENSMAUG00000014030	Rab33b	89	38.350
ENSMAUG00000015005	Rab5c	81	33.702	ENSMAUG00000020006	Hras	94	33.702
ENSMAUG00000015005	Rab5c	75	36.585	ENSMAUG00000011701	Rab39b	77	36.585
ENSMAUG00000015005	Rab5c	55	31.707	ENSMAUG00000005741	Arl8a	62	31.707
ENSMAUG00000015005	Rab5c	85	38.421	ENSMAUG00000008371	Rab12	69	34.975
ENSMAUG00000015005	Rab5c	83	39.459	ENSMAUG00000008179	Rab30	91	39.459
ENSMAUG00000015005	Rab5c	100	87.500	ENSMAUG00000011242	-	100	87.500
ENSMAUG00000015005	Rab5c	75	44.720	ENSMAUG00000017792	Rab2a	76	44.720
ENSMAUG00000015005	Rab5c	89	37.949	ENSMAUG00000009328	Rab35	96	37.949
ENSMAUG00000015005	Rab5c	97	86.124	ENSMAUG00000011613	Rab5b	97	86.124
ENSMAUG00000015005	Rab5c	63	40.741	ENSMAUG00000014779	Rab14	90	40.741
ENSMAUG00000015005	Rab5c	89	38.542	ENSMAUG00000015713	Rab13	95	38.542
ENSMAUG00000015005	Rab5c	90	47.423	ENSMAUG00000008648	Rab22a	98	47.423
ENSMAUG00000015005	Rab5c	89	35.354	ENSMAUG00000010219	Rab9b	97	35.354
ENSMAUG00000015005	Rab5c	73	36.250	ENSMAUG00000016039	Rab36	60	36.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000015005	Rab5c	100	99.074	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSMAUG00000015005	Rab5c	99	89.302	ENSAPOG00000016864	rab5c	98	91.628	Acanthochromis_polyacanthus
ENSMAUG00000015005	Rab5c	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSMAUG00000015005	Rab5c	99	88.889	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSMAUG00000015005	Rab5c	99	89.352	ENSAOCG00000016614	rab5c	98	91.667	Amphiprion_ocellaris
ENSMAUG00000015005	Rab5c	97	89.100	ENSAPEG00000017868	-	97	91.469	Amphiprion_percula
ENSMAUG00000015005	Rab5c	100	89.908	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSMAUG00000015005	Rab5c	94	99.510	ENSANAG00000025390	RAB5C	100	99.510	Aotus_nancymaae
ENSMAUG00000015005	Rab5c	99	87.963	ENSACLG00000002706	rab5c	98	90.741	Astatotilapia_calliptera
ENSMAUG00000015005	Rab5c	96	89.573	ENSACLG00000008615	-	99	89.041	Astatotilapia_calliptera
ENSMAUG00000015005	Rab5c	96	89.048	ENSAMXG00000037267	-	99	91.429	Astyanax_mexicanus
ENSMAUG00000015005	Rab5c	99	89.862	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSMAUG00000015005	Rab5c	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSMAUG00000015005	Rab5c	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSMAUG00000015005	Rab5c	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSMAUG00000015005	Rab5c	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSMAUG00000015005	Rab5c	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSMAUG00000015005	Rab5c	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSMAUG00000015005	Rab5c	100	99.537	ENSCCAG00000025940	RAB5C	100	99.537	Cebus_capucinus
ENSMAUG00000015005	Rab5c	100	99.074	ENSCATG00000040873	RAB5C	100	99.074	Cercocebus_atys
ENSMAUG00000015005	Rab5c	100	98.148	ENSCLAG00000016650	RAB5C	100	98.148	Chinchilla_lanigera
ENSMAUG00000015005	Rab5c	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSMAUG00000015005	Rab5c	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSMAUG00000015005	Rab5c	99	74.545	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSMAUG00000015005	Rab5c	100	99.074	ENSCGRG00001014226	Rab5c	100	99.074	Cricetulus_griseus_chok1gshd
ENSMAUG00000015005	Rab5c	100	99.074	ENSCGRG00000007534	Rab5c	100	99.074	Cricetulus_griseus_crigri
ENSMAUG00000015005	Rab5c	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSMAUG00000015005	Rab5c	99	89.352	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSMAUG00000015005	Rab5c	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSMAUG00000015005	Rab5c	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSMAUG00000015005	Rab5c	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSMAUG00000015005	Rab5c	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSMAUG00000015005	Rab5c	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSMAUG00000015005	Rab5c	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSMAUG00000015005	Rab5c	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSMAUG00000015005	Rab5c	99	87.963	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSMAUG00000015005	Rab5c	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSMAUG00000015005	Rab5c	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSMAUG00000015005	Rab5c	100	96.296	ENSFDAG00000021541	RAB5C	100	96.296	Fukomys_damarensis
ENSMAUG00000015005	Rab5c	99	89.352	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSMAUG00000015005	Rab5c	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSMAUG00000015005	Rab5c	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSMAUG00000015005	Rab5c	99	87.963	ENSGMOG00000015096	rab5c	98	90.741	Gadus_morhua
ENSMAUG00000015005	Rab5c	99	89.815	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSMAUG00000015005	Rab5c	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSMAUG00000015005	Rab5c	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSMAUG00000015005	Rab5c	100	99.074	ENSGGOG00000005472	RAB5C	100	99.074	Gorilla_gorilla
ENSMAUG00000015005	Rab5c	99	87.963	ENSHBUG00000002014	rab5c	98	90.741	Haplochromis_burtoni
ENSMAUG00000015005	Rab5c	96	89.573	ENSHBUG00000006823	-	99	89.041	Haplochromis_burtoni
ENSMAUG00000015005	Rab5c	100	95.833	ENSHGLG00000012067	RAB5C	100	95.833	Heterocephalus_glaber_female
ENSMAUG00000015005	Rab5c	99	89.862	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSMAUG00000015005	Rab5c	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSMAUG00000015005	Rab5c	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSMAUG00000015005	Rab5c	100	98.611	ENSSTOG00000006620	RAB5C	100	98.611	Ictidomys_tridecemlineatus
ENSMAUG00000015005	Rab5c	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSMAUG00000015005	Rab5c	99	88.889	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSMAUG00000015005	Rab5c	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSMAUG00000015005	Rab5c	99	90.278	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSMAUG00000015005	Rab5c	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSMAUG00000015005	Rab5c	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSMAUG00000015005	Rab5c	100	99.074	ENSMFAG00000039627	RAB5C	100	99.074	Macaca_fascicularis
ENSMAUG00000015005	Rab5c	100	99.074	ENSMNEG00000000355	RAB5C	100	99.074	Macaca_nemestrina
ENSMAUG00000015005	Rab5c	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSMAUG00000015005	Rab5c	99	88.426	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSMAUG00000015005	Rab5c	96	89.573	ENSMZEG00005021090	-	99	89.041	Maylandia_zebra
ENSMAUG00000015005	Rab5c	99	87.963	ENSMZEG00005022735	rab5c	98	90.741	Maylandia_zebra
ENSMAUG00000015005	Rab5c	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSMAUG00000015005	Rab5c	100	99.074	ENSMOCG00000018531	-	100	99.074	Microtus_ochrogaster
ENSMAUG00000015005	Rab5c	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSMAUG00000015005	Rab5c	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSMAUG00000015005	Rab5c	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSMAUG00000015005	Rab5c	100	99.537	MGP_CAROLIEiJ_G0017184	Rab5c	100	99.537	Mus_caroli
ENSMAUG00000015005	Rab5c	100	99.537	ENSMUSG00000019173	Rab5c	100	99.537	Mus_musculus
ENSMAUG00000015005	Rab5c	100	99.537	MGP_PahariEiJ_G0018314	Rab5c	100	99.537	Mus_pahari
ENSMAUG00000015005	Rab5c	100	99.537	MGP_SPRETEiJ_G0018027	Rab5c	100	99.537	Mus_spretus
ENSMAUG00000015005	Rab5c	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSMAUG00000015005	Rab5c	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSMAUG00000015005	Rab5c	96	89.573	ENSNBRG00000016922	-	99	89.041	Neolamprologus_brichardi
ENSMAUG00000015005	Rab5c	99	88.889	ENSNBRG00000018165	rab5c	98	91.667	Neolamprologus_brichardi
ENSMAUG00000015005	Rab5c	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSMAUG00000015005	Rab5c	100	97.222	ENSODEG00000017920	RAB5C	100	97.222	Octodon_degus
ENSMAUG00000015005	Rab5c	99	88.889	ENSONIG00000001113	rab5c	98	91.667	Oreochromis_niloticus
ENSMAUG00000015005	Rab5c	100	88.532	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSMAUG00000015005	Rab5c	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSMAUG00000015005	Rab5c	100	88.532	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSMAUG00000015005	Rab5c	100	88.532	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSMAUG00000015005	Rab5c	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSMAUG00000015005	Rab5c	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSMAUG00000015005	Rab5c	100	99.074	ENSPPAG00000037206	RAB5C	100	99.074	Pan_paniscus
ENSMAUG00000015005	Rab5c	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSMAUG00000015005	Rab5c	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSMAUG00000015005	Rab5c	100	99.074	ENSPTRG00000009194	RAB5C	100	99.074	Pan_troglodytes
ENSMAUG00000015005	Rab5c	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSMAUG00000015005	Rab5c	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSMAUG00000015005	Rab5c	99	86.574	ENSPMGG00000010792	rab5c	97	90.521	Periophthalmus_magnuspinnatus
ENSMAUG00000015005	Rab5c	100	99.074	ENSPEMG00000017971	Rab5c	100	99.074	Peromyscus_maniculatus_bairdii
ENSMAUG00000015005	Rab5c	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSMAUG00000015005	Rab5c	99	78.605	ENSPMAG00000007867	rab5c	100	78.605	Petromyzon_marinus
ENSMAUG00000015005	Rab5c	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSMAUG00000015005	Rab5c	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSMAUG00000015005	Rab5c	99	89.815	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSMAUG00000015005	Rab5c	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSMAUG00000015005	Rab5c	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSMAUG00000015005	Rab5c	99	89.815	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSMAUG00000015005	Rab5c	99	89.815	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSMAUG00000015005	Rab5c	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSMAUG00000015005	Rab5c	100	99.074	ENSPPYG00000008398	RAB5C	100	99.074	Pongo_abelii
ENSMAUG00000015005	Rab5c	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSMAUG00000015005	Rab5c	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSMAUG00000015005	Rab5c	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSMAUG00000015005	Rab5c	96	89.573	ENSPNYG00000015851	-	99	89.041	Pundamilia_nyererei
ENSMAUG00000015005	Rab5c	99	87.963	ENSPNYG00000010615	rab5c	98	90.741	Pundamilia_nyererei
ENSMAUG00000015005	Rab5c	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSMAUG00000015005	Rab5c	97	87.264	ENSPNAG00000002218	-	99	89.623	Pygocentrus_nattereri
ENSMAUG00000015005	Rab5c	100	100.000	ENSRNOG00000018568	Rab5c	100	100.000	Rattus_norvegicus
ENSMAUG00000015005	Rab5c	100	99.074	ENSRBIG00000031376	RAB5C	100	99.074	Rhinopithecus_bieti
ENSMAUG00000015005	Rab5c	100	99.074	ENSRROG00000032895	RAB5C	100	99.074	Rhinopithecus_roxellana
ENSMAUG00000015005	Rab5c	100	99.537	ENSSBOG00000032552	-	100	99.537	Saimiri_boliviensis_boliviensis
ENSMAUG00000015005	Rab5c	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSMAUG00000015005	Rab5c	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSMAUG00000015005	Rab5c	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSMAUG00000015005	Rab5c	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSMAUG00000015005	Rab5c	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSMAUG00000015005	Rab5c	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSMAUG00000015005	Rab5c	99	89.815	ENSSPAG00000006436	rab5c	98	92.593	Stegastes_partitus
ENSMAUG00000015005	Rab5c	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSMAUG00000015005	Rab5c	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSMAUG00000015005	Rab5c	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSMAUG00000015005	Rab5c	100	99.074	ENSTBEG00000007092	RAB5C	100	99.074	Tupaia_belangeri
ENSMAUG00000015005	Rab5c	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSMAUG00000015005	Rab5c	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSMAUG00000015005	Rab5c	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSMAUG00000015005	Rab5c	96	91.905	ENSXCOG00000006300	-	99	89.091	Xiphophorus_couchianus
ENSMAUG00000015005	Rab5c	99	89.352	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSMAUG00000015005	Rab5c	99	89.815	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus
ENSMAUG00000015005	Rab5c	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus