EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000015356 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U6 snRNA-associated Sm-like protein LSm8
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 292 bases
Position: chrKB708362.1:778613-778904
Accession: 101842483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000016099	LSM	PF01423.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000020032	-	258	XM_013125686	ENSMAUP00000016099	85 (aa)	XP_012981140	-

Gene Model

Click here to download ENSMAUG00000015356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000015356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000015356	-	100	72.917	ENSMAUG00000015721	-	100	72.917
ENSMAUG00000015356	-	84	63.415	ENSMAUG00000020287	-	100	68.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000015356	-	100	80.208	ENSG00000128534	LSM8	100	80.208	Homo_sapiens
ENSMAUG00000015356	-	100	73.958	ENSAPOG00000008649	lsm8	100	73.958	Acanthochromis_polyacanthus
ENSMAUG00000015356	-	100	80.208	ENSAMEG00000001162	LSM8	100	80.208	Ailuropoda_melanoleuca
ENSMAUG00000015356	-	75	76.000	ENSACIG00000014694	lsm8	100	76.000	Amphilophus_citrinellus
ENSMAUG00000015356	-	100	73.958	ENSAOCG00000013926	lsm8	100	73.958	Amphiprion_ocellaris
ENSMAUG00000015356	-	100	73.958	ENSAPEG00000023502	lsm8	100	73.958	Amphiprion_percula
ENSMAUG00000015356	-	75	76.000	ENSATEG00000023432	lsm8	100	76.000	Anabas_testudineus
ENSMAUG00000015356	-	93	76.667	ENSAPLG00000005115	LSM8	91	76.667	Anas_platyrhynchos
ENSMAUG00000015356	-	100	80.208	ENSANAG00000027771	LSM8	100	80.208	Aotus_nancymaae
ENSMAUG00000015356	-	100	73.958	ENSACLG00000011253	lsm8	100	73.958	Astatotilapia_calliptera
ENSMAUG00000015356	-	100	76.042	ENSAMXG00000042902	lsm8	100	76.042	Astyanax_mexicanus
ENSMAUG00000015356	-	100	80.208	ENSBTAG00000012649	LSM8	100	80.208	Bos_taurus
ENSMAUG00000015356	-	98	50.000	WBGene00003082	lsm-8	96	50.000	Caenorhabditis_elegans
ENSMAUG00000015356	-	100	80.208	ENSCJAG00000046406	LSM8	100	80.208	Callithrix_jacchus
ENSMAUG00000015356	-	99	81.053	ENSCAFG00000016459	LSM8	96	81.053	Canis_familiaris
ENSMAUG00000015356	-	87	81.176	ENSCAFG00020012800	-	66	81.176	Canis_lupus_dingo
ENSMAUG00000015356	-	100	80.208	ENSCAFG00020007643	-	100	80.208	Canis_lupus_dingo
ENSMAUG00000015356	-	91	78.409	ENSCHIG00000014201	LSM8	94	78.409	Capra_hircus
ENSMAUG00000015356	-	100	80.208	ENSTSYG00000032434	LSM8	100	80.208	Carlito_syrichta
ENSMAUG00000015356	-	74	77.027	ENSCAPG00000008253	LSM8	100	77.027	Cavia_aperea
ENSMAUG00000015356	-	100	80.208	ENSCPOG00000035673	LSM8	100	80.208	Cavia_porcellus
ENSMAUG00000015356	-	100	80.208	ENSCCAG00000021329	LSM8	100	80.208	Cebus_capucinus
ENSMAUG00000015356	-	100	80.208	ENSCATG00000045302	LSM8	100	80.208	Cercocebus_atys
ENSMAUG00000015356	-	100	80.208	ENSCLAG00000003726	LSM8	100	80.208	Chinchilla_lanigera
ENSMAUG00000015356	-	100	78.125	ENSCSAG00000019007	-	100	78.125	Chlorocebus_sabaeus
ENSMAUG00000015356	-	100	80.208	ENSCSAG00000010802	-	100	80.208	Chlorocebus_sabaeus
ENSMAUG00000015356	-	88	80.233	ENSCPBG00000008154	LSM8	88	80.233	Chrysemys_picta_bellii
ENSMAUG00000015356	-	100	61.458	ENSCING00000024877	-	100	61.458	Ciona_intestinalis
ENSMAUG00000015356	-	100	80.208	ENSCANG00000040728	LSM8	100	80.208	Colobus_angolensis_palliatus
ENSMAUG00000015356	-	100	80.208	ENSCGRG00001000450	Lsm8	100	80.208	Cricetulus_griseus_chok1gshd
ENSMAUG00000015356	-	87	80.000	ENSCGRG00000005587	Lsm8	100	80.000	Cricetulus_griseus_crigri
ENSMAUG00000015356	-	100	64.583	ENSCSEG00000004164	lsm8	100	64.583	Cynoglossus_semilaevis
ENSMAUG00000015356	-	100	73.958	ENSCVAG00000020547	lsm8	100	73.958	Cyprinodon_variegatus
ENSMAUG00000015356	-	100	72.917	ENSDARG00000091656	lsm8	100	72.917	Danio_rerio
ENSMAUG00000015356	-	100	80.208	ENSDNOG00000034613	LSM8	100	80.208	Dasypus_novemcinctus
ENSMAUG00000015356	-	100	80.208	ENSDORG00000027868	Lsm8	100	80.208	Dipodomys_ordii
ENSMAUG00000015356	-	99	57.895	FBgn0035271	CG2021	100	57.895	Drosophila_melanogaster
ENSMAUG00000015356	-	100	79.167	ENSETEG00000011594	LSM8	100	79.167	Echinops_telfairi
ENSMAUG00000015356	-	74	70.270	ENSEBUG00000012017	lsm8	100	70.270	Eptatretus_burgeri
ENSMAUG00000015356	-	100	80.208	ENSEASG00005008932	LSM8	62	80.208	Equus_asinus_asinus
ENSMAUG00000015356	-	100	73.958	ENSECAG00000024025	LSM8	85	73.958	Equus_caballus
ENSMAUG00000015356	-	100	72.917	ENSELUG00000010138	lsm8	100	72.917	Esox_lucius
ENSMAUG00000015356	-	84	72.973	ENSFCAG00000044794	-	83	72.973	Felis_catus
ENSMAUG00000015356	-	100	80.208	ENSFCAG00000036620	-	100	80.208	Felis_catus
ENSMAUG00000015356	-	100	79.167	ENSFALG00000010023	LSM8	100	79.167	Ficedula_albicollis
ENSMAUG00000015356	-	100	80.208	ENSFDAG00000019530	LSM8	100	80.208	Fukomys_damarensis
ENSMAUG00000015356	-	100	73.958	ENSFHEG00000013729	lsm8	100	73.958	Fundulus_heteroclitus
ENSMAUG00000015356	-	100	79.167	ENSGALG00000009110	LSM8	100	79.167	Gallus_gallus
ENSMAUG00000015356	-	100	73.958	ENSGAFG00000001135	lsm8	100	73.958	Gambusia_affinis
ENSMAUG00000015356	-	100	80.208	ENSGAGG00000017366	LSM8	100	80.208	Gopherus_agassizii
ENSMAUG00000015356	-	100	80.208	ENSGGOG00000041883	LSM8	100	80.208	Gorilla_gorilla
ENSMAUG00000015356	-	100	73.958	ENSHBUG00000003646	lsm8	100	73.958	Haplochromis_burtoni
ENSMAUG00000015356	-	67	76.471	ENSHGLG00000001988	-	99	76.471	Heterocephalus_glaber_female
ENSMAUG00000015356	-	100	80.208	ENSHGLG00000019782	-	100	80.208	Heterocephalus_glaber_female
ENSMAUG00000015356	-	100	76.842	ENSHGLG00100012166	-	100	76.842	Heterocephalus_glaber_male
ENSMAUG00000015356	-	99	77.895	ENSHGLG00100003934	-	95	77.895	Heterocephalus_glaber_male
ENSMAUG00000015356	-	100	73.958	ENSHCOG00000005037	lsm8	100	73.958	Hippocampus_comes
ENSMAUG00000015356	-	100	76.042	ENSIPUG00000019811	NAA38	100	76.042	Ictalurus_punctatus
ENSMAUG00000015356	-	100	80.208	ENSSTOG00000009039	LSM8	100	80.208	Ictidomys_tridecemlineatus
ENSMAUG00000015356	-	91	69.318	ENSSTOG00000034801	-	81	69.318	Ictidomys_tridecemlineatus
ENSMAUG00000015356	-	100	80.208	ENSJJAG00000009031	Lsm8	99	80.208	Jaculus_jaculus
ENSMAUG00000015356	-	100	73.958	ENSKMAG00000018983	lsm8	100	73.958	Kryptolebias_marmoratus
ENSMAUG00000015356	-	100	77.083	ENSLACG00000010231	LSM8	100	77.083	Latimeria_chalumnae
ENSMAUG00000015356	-	100	76.042	ENSLOCG00000015580	lsm8	100	76.042	Lepisosteus_oculatus
ENSMAUG00000015356	-	100	79.381	ENSLAFG00000011242	LSM8	100	79.381	Loxodonta_africana
ENSMAUG00000015356	-	100	80.208	ENSMFAG00000035798	LSM8	100	80.208	Macaca_fascicularis
ENSMAUG00000015356	-	100	77.083	ENSMFAG00000013044	-	100	77.083	Macaca_fascicularis
ENSMAUG00000015356	-	100	80.208	ENSMMUG00000046401	LSM8	100	75.676	Macaca_mulatta
ENSMAUG00000015356	-	75	76.000	ENSMNEG00000011141	-	100	76.000	Macaca_nemestrina
ENSMAUG00000015356	-	100	80.208	ENSMNEG00000036764	-	100	80.208	Macaca_nemestrina
ENSMAUG00000015356	-	100	80.208	ENSMLEG00000035828	-	100	80.208	Mandrillus_leucophaeus
ENSMAUG00000015356	-	100	80.682	ENSMLEG00000039324	-	100	80.682	Mandrillus_leucophaeus
ENSMAUG00000015356	-	75	76.000	ENSMAMG00000018839	lsm8	100	76.000	Mastacembelus_armatus
ENSMAUG00000015356	-	100	73.958	ENSMZEG00005019138	lsm8	100	73.958	Maylandia_zebra
ENSMAUG00000015356	-	100	79.167	ENSMGAG00000008808	LSM8	100	79.167	Meleagris_gallopavo
ENSMAUG00000015356	-	100	80.208	ENSMICG00000042730	LSM8	100	80.208	Microcebus_murinus
ENSMAUG00000015356	-	100	80.208	ENSMOCG00000001688	Lsm8	100	80.208	Microtus_ochrogaster
ENSMAUG00000015356	-	75	76.000	ENSMMOG00000006046	lsm8	100	76.000	Mola_mola
ENSMAUG00000015356	-	61	77.778	ENSMODG00000015729	LSM8	81	77.778	Monodelphis_domestica
ENSMAUG00000015356	-	100	75.000	ENSMALG00000000405	lsm8	100	75.000	Monopterus_albus
ENSMAUG00000015356	-	100	80.208	MGP_CAROLIEiJ_G0028125	-	100	80.208	Mus_caroli
ENSMAUG00000015356	-	100	80.208	ENSMUSG00000044155	Lsm8	100	80.208	Mus_musculus
ENSMAUG00000015356	-	100	80.208	MGP_PahariEiJ_G0021881	Lsm8	100	80.208	Mus_pahari
ENSMAUG00000015356	-	100	80.208	MGP_SPRETEiJ_G0029125	-	100	80.208	Mus_spretus
ENSMAUG00000015356	-	100	79.167	ENSMLUG00000027762	-	100	79.167	Myotis_lucifugus
ENSMAUG00000015356	-	100	80.208	ENSMLUG00000006837	-	100	80.208	Myotis_lucifugus
ENSMAUG00000015356	-	100	80.208	ENSNGAG00000016554	Lsm8	100	80.208	Nannospalax_galili
ENSMAUG00000015356	-	100	73.958	ENSNBRG00000014441	lsm8	100	73.958	Neolamprologus_brichardi
ENSMAUG00000015356	-	100	80.208	ENSNLEG00000011768	LSM8	100	80.208	Nomascus_leucogenys
ENSMAUG00000015356	-	100	72.632	ENSMEUG00000007801	LSM8	100	72.632	Notamacropus_eugenii
ENSMAUG00000015356	-	87	80.000	ENSOPRG00000014809	LSM8	100	80.000	Ochotona_princeps
ENSMAUG00000015356	-	88	63.953	ENSODEG00000020290	-	100	63.953	Octodon_degus
ENSMAUG00000015356	-	100	80.208	ENSODEG00000000418	-	100	80.208	Octodon_degus
ENSMAUG00000015356	-	100	79.167	ENSOANG00000014536	LSM8	100	79.167	Ornithorhynchus_anatinus
ENSMAUG00000015356	-	100	79.381	ENSOCUG00000017359	LSM8	100	79.381	Oryctolagus_cuniculus
ENSMAUG00000015356	-	100	64.583	ENSORLG00000017432	lsm8	100	64.583	Oryzias_latipes
ENSMAUG00000015356	-	100	64.583	ENSORLG00020004376	lsm8	100	64.583	Oryzias_latipes_hni
ENSMAUG00000015356	-	100	73.958	ENSORLG00015003757	lsm8	100	73.958	Oryzias_latipes_hsok
ENSMAUG00000015356	-	100	63.542	ENSOMEG00000022509	lsm8	100	63.542	Oryzias_melastigma
ENSMAUG00000015356	-	100	80.208	ENSOGAG00000013377	LSM8	100	80.208	Otolemur_garnettii
ENSMAUG00000015356	-	100	80.208	ENSOARG00000017974	LSM8	100	80.208	Ovis_aries
ENSMAUG00000015356	-	75	78.667	ENSPPAG00000043228	-	100	78.667	Pan_paniscus
ENSMAUG00000015356	-	100	80.208	ENSPPRG00000006444	LSM8	100	80.208	Panthera_pardus
ENSMAUG00000015356	-	100	80.208	ENSPTIG00000004722	LSM8	100	80.208	Panthera_tigris_altaica
ENSMAUG00000015356	-	75	78.667	ENSPTRG00000046596	-	100	78.667	Pan_troglodytes
ENSMAUG00000015356	-	100	75.000	ENSPANG00000019395	-	100	75.000	Papio_anubis
ENSMAUG00000015356	-	100	80.208	ENSPANG00000035470	-	100	80.208	Papio_anubis
ENSMAUG00000015356	-	88	79.070	ENSPKIG00000006092	lsm8	87	79.070	Paramormyrops_kingsleyae
ENSMAUG00000015356	-	75	78.667	ENSPSIG00000017054	LSM8	100	78.667	Pelodiscus_sinensis
ENSMAUG00000015356	-	75	76.000	ENSPMGG00000016442	lsm8	100	76.000	Periophthalmus_magnuspinnatus
ENSMAUG00000015356	-	74	75.676	ENSPEMG00000009153	Lsm8	100	75.676	Peromyscus_maniculatus_bairdii
ENSMAUG00000015356	-	96	80.645	ENSPCIG00000021467	LSM8	98	80.645	Phascolarctos_cinereus
ENSMAUG00000015356	-	100	73.958	ENSPFOG00000012340	lsm8	100	73.958	Poecilia_formosa
ENSMAUG00000015356	-	100	69.792	ENSPLAG00000000516	lsm8	100	69.792	Poecilia_latipinna
ENSMAUG00000015356	-	100	73.958	ENSPMEG00000022567	lsm8	100	73.958	Poecilia_mexicana
ENSMAUG00000015356	-	73	66.250	ENSPREG00000005527	lsm8	72	66.250	Poecilia_reticulata
ENSMAUG00000015356	-	100	80.208	ENSPPYG00000017942	LSM8	100	80.208	Pongo_abelii
ENSMAUG00000015356	-	100	80.208	ENSPCOG00000003309	-	100	80.208	Propithecus_coquereli
ENSMAUG00000015356	-	99	73.563	ENSPCOG00000017982	-	99	73.563	Propithecus_coquereli
ENSMAUG00000015356	-	87	80.000	ENSPVAG00000000990	LSM8	100	80.000	Pteropus_vampyrus
ENSMAUG00000015356	-	100	73.958	ENSPNYG00000011448	lsm8	100	73.958	Pundamilia_nyererei
ENSMAUG00000015356	-	100	76.042	ENSPNAG00000010252	lsm8	100	76.042	Pygocentrus_nattereri
ENSMAUG00000015356	-	100	80.208	ENSRNOG00000058677	Lsm8	100	80.208	Rattus_norvegicus
ENSMAUG00000015356	-	100	80.208	ENSRBIG00000032851	LSM8	100	80.208	Rhinopithecus_bieti
ENSMAUG00000015356	-	100	80.208	ENSRROG00000039618	LSM8	100	80.208	Rhinopithecus_roxellana
ENSMAUG00000015356	-	100	80.208	ENSSBOG00000023223	LSM8	100	80.208	Saimiri_boliviensis_boliviensis
ENSMAUG00000015356	-	100	80.208	ENSSHAG00000018435	-	100	80.208	Sarcophilus_harrisii
ENSMAUG00000015356	-	100	75.000	ENSSFOG00015004412	lsm8	100	75.000	Scleropages_formosus
ENSMAUG00000015356	-	75	76.000	ENSSMAG00000009458	lsm8	100	76.000	Scophthalmus_maximus
ENSMAUG00000015356	-	100	73.958	ENSSDUG00000014702	lsm8	100	73.958	Seriola_dumerili
ENSMAUG00000015356	-	75	76.000	ENSSLDG00000016870	lsm8	100	76.000	Seriola_lalandi_dorsalis
ENSMAUG00000015356	-	72	77.778	ENSSARG00000009628	-	100	77.778	Sorex_araneus
ENSMAUG00000015356	-	100	80.208	ENSSPUG00000017419	LSM8	100	80.208	Sphenodon_punctatus
ENSMAUG00000015356	-	100	73.958	ENSSPAG00000021422	lsm8	100	73.958	Stegastes_partitus
ENSMAUG00000015356	-	100	80.208	ENSSSCG00000021652	LSM8	100	80.208	Sus_scrofa
ENSMAUG00000015356	-	100	77.083	ENSTGUG00000016823	-	100	77.083	Taeniopygia_guttata
ENSMAUG00000015356	-	100	78.125	ENSTGUG00000004730	-	100	78.125	Taeniopygia_guttata
ENSMAUG00000015356	-	100	73.958	ENSTRUG00000025192	lsm8	100	73.958	Takifugu_rubripes
ENSMAUG00000015356	-	100	73.958	ENSTNIG00000002864	lsm8	100	73.958	Tetraodon_nigroviridis
ENSMAUG00000015356	-	100	80.208	ENSTTRG00000001023	LSM8	100	80.208	Tursiops_truncatus
ENSMAUG00000015356	-	100	73.958	ENSUAMG00000006943	-	98	73.958	Ursus_americanus
ENSMAUG00000015356	-	100	73.958	ENSUMAG00000003073	LSM8	100	73.958	Ursus_maritimus
ENSMAUG00000015356	-	100	80.208	ENSVPAG00000001530	LSM8	100	80.208	Vicugna_pacos
ENSMAUG00000015356	-	75	76.000	ENSVVUG00000013248	-	82	76.000	Vulpes_vulpes
ENSMAUG00000015356	-	89	79.310	ENSXETG00000021829	lsm8	90	79.310	Xenopus_tropicalis
ENSMAUG00000015356	-	100	72.917	ENSXCOG00000012938	lsm8	100	72.917	Xiphophorus_couchianus
ENSMAUG00000015356	-	100	73.958	ENSXMAG00000025919	lsm8	100	73.958	Xiphophorus_maculatus