EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMAUG00000015473 (Gene tree)
Gene ID: 101829764
Gene Symbol: Rpusd3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Plus strand
Length: 4057 bases
Position: chrKB708132.1:10073727-10077783
Accession: 101829764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000016282	PseudoU_synth_2	PF00849.22	1.4e-18	1	1
ENSMAUP00000016279	PseudoU_synth_2	PF00849.22	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000020212	-	1303	XM_005066146	ENSMAUP00000016279	344 (aa)	XP_005066203	A0A1U7Q3M6
ENSMAUT00000020215	-	882	-	ENSMAUP00000016282	294 (aa)	-	-

Gene Model

Click here to download ENSMAUG00000015473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000015473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMAUG00000015473	Rpusd3	88	30.462	ENSMAUG00000010280	Rpusd4	81	31.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000015473	Rpusd3	97	75.821	ENSG00000156990	RPUSD3	94	75.821	Homo_sapiens
ENSMAUG00000015473	Rpusd3	100	73.256	ENSAMEG00000016227	RPUSD3	98	73.256	Ailuropoda_melanoleuca
ENSMAUG00000015473	Rpusd3	81	53.597	ENSACAG00000009836	RPUSD3	79	53.597	Anolis_carolinensis
ENSMAUG00000015473	Rpusd3	91	53.047	ENSANAG00000007127	-	95	54.000	Aotus_nancymaae
ENSMAUG00000015473	Rpusd3	67	75.758	ENSANAG00000019945	-	79	75.758	Aotus_nancymaae
ENSMAUG00000015473	Rpusd3	64	75.401	ENSANAG00000038118	-	89	75.401	Aotus_nancymaae
ENSMAUG00000015473	Rpusd3	100	72.384	ENSBTAG00000007968	RPUSD3	100	72.384	Bos_taurus
ENSMAUG00000015473	Rpusd3	100	72.093	ENSCAFG00000029733	RPUSD3	98	72.093	Canis_familiaris
ENSMAUG00000015473	Rpusd3	100	72.093	ENSCAFG00020008582	RPUSD3	98	72.093	Canis_lupus_dingo
ENSMAUG00000015473	Rpusd3	100	71.512	ENSCHIG00000026027	RPUSD3	100	71.512	Capra_hircus
ENSMAUG00000015473	Rpusd3	98	69.591	ENSTSYG00000009994	RPUSD3	97	69.591	Carlito_syrichta
ENSMAUG00000015473	Rpusd3	76	74.525	ENSCAPG00000017559	RPUSD3	99	74.525	Cavia_aperea
ENSMAUG00000015473	Rpusd3	99	64.723	ENSCPOG00000037956	RPUSD3	90	64.723	Cavia_porcellus
ENSMAUG00000015473	Rpusd3	97	75.375	ENSCCAG00000029530	RPUSD3	95	75.375	Cebus_capucinus
ENSMAUG00000015473	Rpusd3	97	75.821	ENSCATG00000036939	RPUSD3	95	75.821	Cercocebus_atys
ENSMAUG00000015473	Rpusd3	97	75.821	ENSCSAG00000010506	RPUSD3	94	75.821	Chlorocebus_sabaeus
ENSMAUG00000015473	Rpusd3	51	80.357	ENSCHOG00000010151	-	67	80.357	Choloepus_hoffmanni
ENSMAUG00000015473	Rpusd3	75	49.615	ENSCPBG00000008825	RPUSD3	97	51.154	Chrysemys_picta_bellii
ENSMAUG00000015473	Rpusd3	97	75.821	ENSCANG00000040711	RPUSD3	94	75.821	Colobus_angolensis_palliatus
ENSMAUG00000015473	Rpusd3	100	92.442	ENSCGRG00001004923	Rpusd3	95	92.442	Cricetulus_griseus_chok1gshd
ENSMAUG00000015473	Rpusd3	100	92.442	ENSCGRG00000018315	Rpusd3	100	92.442	Cricetulus_griseus_crigri
ENSMAUG00000015473	Rpusd3	97	73.214	ENSDNOG00000039160	RPUSD3	88	73.214	Dasypus_novemcinctus
ENSMAUG00000015473	Rpusd3	75	74.525	ENSDORG00000026827	Rpusd3	91	74.525	Dipodomys_ordii
ENSMAUG00000015473	Rpusd3	99	67.847	ENSETEG00000006538	RPUSD3	96	67.847	Echinops_telfairi
ENSMAUG00000015473	Rpusd3	69	37.745	ENSEBUG00000015605	RPUSD3	66	37.745	Eptatretus_burgeri
ENSMAUG00000015473	Rpusd3	100	73.699	ENSEASG00005014160	RPUSD3	96	73.699	Equus_asinus_asinus
ENSMAUG00000015473	Rpusd3	100	74.277	ENSECAG00000019988	RPUSD3	96	74.277	Equus_caballus
ENSMAUG00000015473	Rpusd3	99	54.885	ENSEEUG00000007353	RPUSD3	97	54.885	Erinaceus_europaeus
ENSMAUG00000015473	Rpusd3	100	72.965	ENSFCAG00000014199	RPUSD3	98	72.965	Felis_catus
ENSMAUG00000015473	Rpusd3	78	48.897	ENSFALG00000012968	RPUSD3	98	48.897	Ficedula_albicollis
ENSMAUG00000015473	Rpusd3	75	75.194	ENSFDAG00000008350	RPUSD3	83	73.333	Fukomys_damarensis
ENSMAUG00000015473	Rpusd3	76	50.958	ENSGAGG00000007493	RPUSD3	82	52.490	Gopherus_agassizii
ENSMAUG00000015473	Rpusd3	97	76.119	ENSGGOG00000013120	RPUSD3	94	76.119	Gorilla_gorilla
ENSMAUG00000015473	Rpusd3	100	59.640	ENSHGLG00000011722	RPUSD3	100	59.640	Heterocephalus_glaber_female
ENSMAUG00000015473	Rpusd3	100	59.640	ENSHGLG00100016038	RPUSD3	100	59.640	Heterocephalus_glaber_male
ENSMAUG00000015473	Rpusd3	100	71.884	ENSSTOG00000002125	RPUSD3	98	71.884	Ictidomys_tridecemlineatus
ENSMAUG00000015473	Rpusd3	100	73.837	ENSJJAG00000012679	Rpusd3	100	73.837	Jaculus_jaculus
ENSMAUG00000015473	Rpusd3	98	72.059	ENSLAFG00000017501	RPUSD3	99	72.059	Loxodonta_africana
ENSMAUG00000015473	Rpusd3	97	75.224	ENSMFAG00000032407	RPUSD3	95	75.224	Macaca_fascicularis
ENSMAUG00000015473	Rpusd3	97	71.045	ENSMMUG00000010628	RPUSD3	94	79.470	Macaca_mulatta
ENSMAUG00000015473	Rpusd3	97	75.522	ENSMNEG00000040308	RPUSD3	95	75.522	Macaca_nemestrina
ENSMAUG00000015473	Rpusd3	97	75.522	ENSMLEG00000033940	RPUSD3	95	75.522	Mandrillus_leucophaeus
ENSMAUG00000015473	Rpusd3	96	74.018	ENSMICG00000002315	RPUSD3	96	74.018	Microcebus_murinus
ENSMAUG00000015473	Rpusd3	100	86.628	ENSMOCG00000022613	Rpusd3	100	86.628	Microtus_ochrogaster
ENSMAUG00000015473	Rpusd3	93	54.321	ENSMODG00000005210	RPUSD3	78	56.566	Monodelphis_domestica
ENSMAUG00000015473	Rpusd3	100	83.721	MGP_CAROLIEiJ_G0028725	Rpusd3	100	83.721	Mus_caroli
ENSMAUG00000015473	Rpusd3	100	84.302	ENSMUSG00000051169	Rpusd3	100	84.302	Mus_musculus
ENSMAUG00000015473	Rpusd3	100	85.174	MGP_PahariEiJ_G0022476	Rpusd3	100	85.174	Mus_pahari
ENSMAUG00000015473	Rpusd3	100	84.302	MGP_SPRETEiJ_G0029753	Rpusd3	100	84.302	Mus_spretus
ENSMAUG00000015473	Rpusd3	100	70.857	ENSMPUG00000017132	RPUSD3	98	70.857	Mustela_putorius_furo
ENSMAUG00000015473	Rpusd3	100	73.837	ENSMLUG00000006135	RPUSD3	99	73.837	Myotis_lucifugus
ENSMAUG00000015473	Rpusd3	99	77.778	ENSNGAG00000023704	Rpusd3	99	77.778	Nannospalax_galili
ENSMAUG00000015473	Rpusd3	97	62.687	ENSNLEG00000004214	RPUSD3	92	77.157	Nomascus_leucogenys
ENSMAUG00000015473	Rpusd3	74	63.672	ENSMEUG00000013098	-	98	63.672	Notamacropus_eugenii
ENSMAUG00000015473	Rpusd3	99	58.407	ENSOPRG00000002300	RPUSD3	96	58.407	Ochotona_princeps
ENSMAUG00000015473	Rpusd3	77	74.242	ENSODEG00000018137	RPUSD3	91	74.242	Octodon_degus
ENSMAUG00000015473	Rpusd3	83	47.183	ENSOANG00000012081	-	99	47.183	Ornithorhynchus_anatinus
ENSMAUG00000015473	Rpusd3	97	61.988	ENSOCUG00000027885	RPUSD3	97	61.988	Oryctolagus_cuniculus
ENSMAUG00000015473	Rpusd3	89	75.896	ENSOGAG00000012592	RPUSD3	98	75.896	Otolemur_garnettii
ENSMAUG00000015473	Rpusd3	100	72.965	ENSOARG00000005928	RPUSD3	98	72.965	Ovis_aries
ENSMAUG00000015473	Rpusd3	97	75.821	ENSPPAG00000038083	RPUSD3	94	75.821	Pan_paniscus
ENSMAUG00000015473	Rpusd3	99	74.854	ENSPPRG00000024433	RPUSD3	95	74.854	Panthera_pardus
ENSMAUG00000015473	Rpusd3	99	74.706	ENSPTIG00000006828	RPUSD3	98	74.706	Panthera_tigris_altaica
ENSMAUG00000015473	Rpusd3	97	75.522	ENSPTRG00000051760	RPUSD3	94	75.522	Pan_troglodytes
ENSMAUG00000015473	Rpusd3	97	75.821	ENSPANG00000023885	RPUSD3	95	75.821	Papio_anubis
ENSMAUG00000015473	Rpusd3	100	88.372	ENSPEMG00000017245	Rpusd3	100	88.372	Peromyscus_maniculatus_bairdii
ENSMAUG00000015473	Rpusd3	83	61.189	ENSPCIG00000021901	RPUSD3	83	61.189	Phascolarctos_cinereus
ENSMAUG00000015473	Rpusd3	99	75.000	ENSPPYG00000013676	RPUSD3	95	75.000	Pongo_abelii
ENSMAUG00000015473	Rpusd3	94	54.710	ENSPCAG00000013731	-	96	54.710	Procavia_capensis
ENSMAUG00000015473	Rpusd3	99	75.221	ENSPCOG00000018314	RPUSD3	96	75.221	Propithecus_coquereli
ENSMAUG00000015473	Rpusd3	100	72.384	ENSPVAG00000011107	RPUSD3	98	72.384	Pteropus_vampyrus
ENSMAUG00000015473	Rpusd3	100	79.651	ENSRNOG00000009084	Rpusd3	100	79.651	Rattus_norvegicus
ENSMAUG00000015473	Rpusd3	97	76.418	ENSRBIG00000041230	RPUSD3	94	76.418	Rhinopithecus_bieti
ENSMAUG00000015473	Rpusd3	97	76.418	ENSRROG00000043328	RPUSD3	94	76.418	Rhinopithecus_roxellana
ENSMAUG00000015473	Rpusd3	98	73.373	ENSSBOG00000036106	RPUSD3	97	73.373	Saimiri_boliviensis_boliviensis
ENSMAUG00000015473	Rpusd3	86	57.912	ENSSHAG00000015536	RPUSD3	96	57.912	Sarcophilus_harrisii
ENSMAUG00000015473	Rpusd3	100	72.674	ENSSSCG00000011555	RPUSD3	98	72.674	Sus_scrofa
ENSMAUG00000015473	Rpusd3	69	48.515	ENSTGUG00000008744	RPUSD3	95	48.649	Taeniopygia_guttata
ENSMAUG00000015473	Rpusd3	95	73.477	ENSTBEG00000000176	RPUSD3	95	73.477	Tupaia_belangeri
ENSMAUG00000015473	Rpusd3	100	72.384	ENSTTRG00000007544	RPUSD3	98	72.384	Tursiops_truncatus
ENSMAUG00000015473	Rpusd3	89	77.705	ENSUAMG00000011354	RPUSD3	95	77.705	Ursus_americanus
ENSMAUG00000015473	Rpusd3	100	73.547	ENSUMAG00000018830	RPUSD3	98	73.547	Ursus_maritimus
ENSMAUG00000015473	Rpusd3	100	72.965	ENSVVUG00000023735	RPUSD3	100	72.965	Vulpes_vulpes
ENSMAUG00000015473	Rpusd3	80	48.014	ENSXETG00000023546	rpusd3	97	48.014	Xenopus_tropicalis