EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMAUG00000015705 (Gene tree)
Gene ID: 101837354
Gene Symbol: Srrm1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Mesocricetus_auratus
Status: putative
Strand: Minus strand
Length: 31823 bases
Position: chrKB708219.1:8527539-8559361
Accession: 101837354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMAUP00000016679	PWI	PF01480.17	5.8e-30	1	1
ENSMAUP00000016689	PWI	PF01480.17	5.8e-30	1	1
ENSMAUP00000016673	PWI	PF01480.17	5.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMAUT00000020616	-	3698	XM_005079600	ENSMAUP00000016679	908 (aa)	XP_005079657	A0A1U7R2F2
ENSMAUT00000020626	-	2799	-	ENSMAUP00000016689	932 (aa)	-	-
ENSMAUT00000020610	-	3740	XM_005079598	ENSMAUP00000016673	922 (aa)	XP_005079655	A0A1U7QS13

Gene Model

Click here to download ENSMAUG00000015705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMAUG00000015705's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMAUG00000015705	Srrm1	50	77.708	ENSAPLG00000002066	SRRM1	59	66.498	Anas_platyrhynchos
ENSMAUG00000015705	Srrm1	89	94.161	ENSCAFG00020020948	SRRM1	99	94.161	Canis_lupus_dingo
ENSMAUG00000015705	Srrm1	54	96.552	ENSCCAG00000029474	SRRM1	97	96.177	Cebus_capucinus
ENSMAUG00000015705	Srrm1	52	95.808	ENSCHOG00000000027	SRRM1	51	95.266	Choloepus_hoffmanni
ENSMAUG00000015705	Srrm1	100	98.130	ENSCGRG00001014174	Srrm1	100	98.130	Cricetulus_griseus_chok1gshd
ENSMAUG00000015705	Srrm1	99	98.144	ENSCGRG00000017603	Srrm1	100	98.144	Cricetulus_griseus_crigri
ENSMAUG00000015705	Srrm1	100	98.377	MGP_CAROLIEiJ_G0026636	Srrm1	100	98.377	Mus_caroli
ENSMAUG00000015705	Srrm1	100	97.944	ENSMUSG00000028809	Srrm1	100	97.944	Mus_musculus
ENSMAUG00000015705	Srrm1	100	98.052	MGP_PahariEiJ_G0028969	Srrm1	100	98.052	Mus_pahari
ENSMAUG00000015705	Srrm1	100	98.268	MGP_SPRETEiJ_G0027616	Srrm1	100	98.268	Mus_spretus
ENSMAUG00000015705	Srrm1	100	97.075	ENSNGAG00000014562	Srrm1	100	97.075	Nannospalax_galili
ENSMAUG00000015705	Srrm1	54	97.166	ENSNLEG00000008966	SRRM1	94	97.166	Nomascus_leucogenys
ENSMAUG00000015705	Srrm1	53	86.885	ENSMEUG00000014704	SRRM1	52	86.557	Notamacropus_eugenii
ENSMAUG00000015705	Srrm1	100	98.377	ENSPEMG00000006254	Srrm1	100	98.377	Peromyscus_maniculatus_bairdii
ENSMAUG00000015705	Srrm1	100	97.912	ENSRNOG00000018194	Srrm1	100	97.912	Rattus_norvegicus
ENSMAUG00000015705	Srrm1	89	94.161	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSMAUG00000015705	Srrm1	60	91.475	ENSSARG00000013718	SRRM1	60	91.475	Sorex_araneus
ENSMAUG00000015705	Srrm1	88	94.017	ENSUMAG00000013121	SRRM1	95	94.017	Ursus_maritimus